ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G07, full insert sequence Length = 1610 Score = 377 bits (190), Expect = e-101 Identities = 245/262 (93%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 420 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 479 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 480 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 539 Query: 330 ccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattcgtgacgttcc 389 |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 ccgtcgtcatcgccgaccgcctcaccggccgctccaagggctacggattcgtgacgttcc 599 Query: 390 gggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatcaccgggcggc 449 ||||||||||||||||||| || |||||| ||||||||||||||| |||| |||| || | Sbjct: 600 gggaggcggaggcggcgcggcgcgcggtgcaggacccgaacccgatgatcgccggccgcc 659 Query: 450 gcgccaactgc-acattgcctc 470 ||||||||||| |||||||||| Sbjct: 660 gcgccaactgcaacattgcctc 681
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 270 bits (136), Expect = 4e-69 Identities = 163/172 (94%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 6224832 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 6224773 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 6224772 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 6224713 Query: 330 ccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattcgt 381 |||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 6224712 ccgtcgtcatcgccgaccgcctcaccggccgctccaagggctacggattcgt 6224661 Score = 111 bits (56), Expect = 2e-21 Identities = 84/92 (91%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 380 gtgacgttccgggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatc 439 ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||| Sbjct: 6224575 gtgacgttccgggaggcggaggcggcgcggcgcgcggtgcaggacccgaacccgatgatc 6224516 Query: 440 accgggcggcgcgccaactgc-acattgcctc 470 |||| || |||||||||||| |||||||||| Sbjct: 6224515 gccggccgccgcgccaactgcaacattgcctc 6224484 Score = 99.6 bits (50), Expect = 8e-18 Identities = 128/154 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 24674819 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 24674760 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 24674759 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 24674700 Query: 350 ctcaccggccgctccaagggctacggattcgtga 383 ||| || | |||||||||||||||||||||| Sbjct: 24674699 gccacggggaggtccaagggctacggattcgtga 24674666 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 26532192 ccgggaggcggaggcggcgcgc 26532213 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 4915360 ccgggaggcggaggcggcgcgc 4915381 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ggaggcggaggcggcgcgccg 411 ||||||||||||||||||||| Sbjct: 3130824 ggaggcggaggcggcgcgccg 3130804 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 4412741 tggcggcggcgtcgtcgtcg 4412722
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 270 bits (136), Expect = 4e-69 Identities = 163/172 (94%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 138651 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 138592 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 138591 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 138532 Query: 330 ccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattcgt 381 |||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 138531 ccgtcgtcatcgccgaccgcctcaccggccgctccaagggctacggattcgt 138480 Score = 111 bits (56), Expect = 2e-21 Identities = 84/92 (91%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 380 gtgacgttccgggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatc 439 ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||| Sbjct: 138394 gtgacgttccgggaggcggaggcggcgcggcgcgcggtgcaggacccgaacccgatgatc 138335 Query: 440 accgggcggcgcgccaactgc-acattgcctc 470 |||| || |||||||||||| |||||||||| Sbjct: 138334 gccggccgccgcgccaactgcaacattgcctc 138303
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 270 bits (136), Expect = 4e-69 Identities = 163/172 (94%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 18908 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 18849 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 18848 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 18789 Query: 330 ccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattcgt 381 |||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 18788 ccgtcgtcatcgccgaccgcctcaccggccgctccaagggctacggattcgt 18737 Score = 111 bits (56), Expect = 2e-21 Identities = 84/92 (91%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 380 gtgacgttccgggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatc 439 ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||| Sbjct: 18651 gtgacgttccgggaggcggaggcggcgcggcgcgcggtgcaggacccgaacccgatgatc 18592 Query: 440 accgggcggcgcgccaactgc-acattgcctc 470 |||| || |||||||||||| |||||||||| Sbjct: 18591 gccggccgccgcgccaactgcaacattgcctc 18560
>dbj|AK106338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G04, full insert sequence Length = 3440 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 293 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 352 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 353 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 412 Query: 333 tggtcatcacggaccgcctcaccggccgctccaagggctacggattcgtgacgttccggg 392 | |||||||| || ||| ||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 413 tcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcaggg 472 Query: 393 aggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatcaccgggcggcgcg 452 || ||||| | ||||| ||||||| | ||||||||||||||||| ||| ||||| | Sbjct: 473 agccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgag 532 Query: 453 ccaactgca 461 ||||||||| Sbjct: 533 ccaactgca 541
>gb|BT016733.1| Zea mays clone Contig566 mRNA sequence Length = 1342 Score = 141 bits (71), Expect = 2e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| ||||| |||| ||||||||||||||||||||||||||||||||||| | Sbjct: 126 gttcggggacaccacgctcaccaaggtgttcgtgggcgggctggcgtgggagacccacaa 185 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| | ||||| |||||||||||| |||||||||||||| |||||||| ||||| | Sbjct: 186 ggacgccctccgcgagcacttcgagcgctacggcgacatcctcgaggccgtcatcatctc 245 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtgacgttccgggaggcggaggc 402 ||| |||||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 246 cgacaagctcaccggccgctccaagggctacggcttcgtgacgttcaaggaggcggacgc 305 Query: 403 ggc 405 ||| Sbjct: 306 ggc 308
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 141 bits (71), Expect = 2e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 221 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 280 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 281 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 340 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtgacgttccgggaggcggaggc 402 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 341 cgacaagctcaccggccgctccaagggctacggattcgtgacgttcaaggaggcggacgc 400 Query: 403 ggc 405 ||| Sbjct: 401 ggc 403
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 4e-29 Identities = 144/169 (85%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 31800362 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 31800421 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 31800422 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 31800481 Query: 333 tggtcatcacggaccgcctcaccggccgctccaagggctacggattcgt 381 | |||||||| || ||| ||| ||||||| ||||||||||||||||| Sbjct: 31800482 tcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgt 31800530 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 320 atcctggaggccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattc 379 ||||| |||||||| |||||||| ||||||| | |||||||||||||||||||||| ||| Sbjct: 29613493 atcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaagggctacggcttc 29613552 Query: 380 gt 381 || Sbjct: 29613553 gt 29613554 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 29613390 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 29613449 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||||| ||||||| Sbjct: 34999630 gatggcggcggcgtcgtcgtcgtcggcgtc 34999659 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 380 gtgacgttccgggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatc 439 ||||||||| ||||| ||||| | ||||| ||||||| | ||||||||||||||||| Sbjct: 31800635 gtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatc 31800694 Query: 440 accgggcggcgcgccaactgca 461 ||| ||||| |||||||||| Sbjct: 31800695 ggcggccggcgagccaactgca 31800716 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 19279383 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 19279350 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 15434947 ccgggaggcggaggcggcgcgc 15434968 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 1656151 ggcggcggcgtcgtcgtcggcggcg 1656175 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 31986427 gcggcgtcgtcgtcgacggc 31986446 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cggcgcgccgggcggtggag 421 |||||||||||||||||||| Sbjct: 24183016 cggcgcgccgggcggtggag 24183035 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 aggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| |||||| Sbjct: 16674308 aggcggaggcggcgcgcggggcgg 16674331 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ccgggaggcggaggcggcgc 407 |||||||||||||||||||| Sbjct: 15918936 ccgggaggcggaggcggcgc 15918917
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 137 bits (69), Expect = 4e-29 Identities = 144/169 (85%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 96160 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 96219 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 96220 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 96279 Query: 333 tggtcatcacggaccgcctcaccggccgctccaagggctacggattcgt 381 | |||||||| || ||| ||| ||||||| ||||||||||||||||| Sbjct: 96280 tcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgt 96328 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 380 gtgacgttccgggaggcggaggcggcgcgccgggcggtggaggacccgaacccgacgatc 439 ||||||||| ||||| ||||| | ||||| ||||||| | ||||||||||||||||| Sbjct: 96433 gtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatc 96492 Query: 440 accgggcggcgcgccaactgca 461 ||| ||||| |||||||||| Sbjct: 96493 ggcggccggcgagccaactgca 96514
>ref|XM_470664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 117 bits (59), Expect = 3e-23 Identities = 134/159 (84%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 78 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 137 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 138 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 197 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgt 381 ||| |||||||||||||||||||||||||||||||| Sbjct: 198 cgacaagctcaccggccgctccaagggctacggattcgt 236
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 3e-23 Identities = 134/159 (84%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 9852558 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 9852499 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 9852498 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 9852439 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgt 381 ||| |||||||||||||||||||||||||||||||| Sbjct: 9852438 cgacaagctcaccggccgctccaagggctacggattcgt 9852400 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgcctcaccggc 358 ||||||||||||| |||||| ||| | |||||||| |||||| | ||| | ||||||| Sbjct: 7668989 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 7668930 Query: 359 cgctccaagggctacgg 375 ||||||||||||||||| Sbjct: 7668929 cgctccaagggctacgg 7668913 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 263605 tccgggaggcggaggcggcgcgc 263583 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 34960565 ggcggcggcgtcgtcggcgacggcg 34960589 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 26526847 ggcggcggcgtcgtcgtcgtcgtcgtct 26526874
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 3e-23 Identities = 134/159 (84%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 9850679 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 9850620 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 9850619 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 9850560 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgt 381 ||| |||||||||||||||||||||||||||||||| Sbjct: 9850559 cgacaagctcaccggccgctccaagggctacggattcgt 9850521 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgcctcaccggc 358 ||||||||||||| |||||| ||| | |||||||| |||||| | ||| | ||||||| Sbjct: 7666824 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 7666765 Query: 359 cgctccaagggctacgg 375 ||||||||||||||||| Sbjct: 7666764 cgctccaagggctacgg 7666748 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 263605 tccgggaggcggaggcggcgcgc 263583 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 35050637 ggcggcggcgtcgtcggcgacggcg 35050661 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 26618170 ggcggcggcgtcgtcgtcgtcgtcgtct 26618197
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 117 bits (59), Expect = 3e-23 Identities = 134/159 (84%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 14947 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 14888 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 14887 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 14828 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgt 381 ||| |||||||||||||||||||||||||||||||| Sbjct: 14827 cgacaagctcaccggccgctccaagggctacggattcgt 14789
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 117 bits (59), Expect = 3e-23 Identities = 134/159 (84%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 21939 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 21998 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||| |||||| |||||||||||| | |||||||||||| |||||||| ||||| | Sbjct: 21999 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctc 22058 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgt 381 ||| |||||||||||||||||||||||||||||||| Sbjct: 22059 cgacaagctcaccggccgctccaagggctacggattcgt 22097
>ref|NM_189337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 42 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 101 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 102 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 161 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtgacgttccgggaggcggaggc 402 ||| ||||||| | ||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 162 cgacaagaacaccggcagatccaagggctacggatttgttacattccgcgagccggaggc 221
>dbj|AK072960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K08, full insert sequence Length = 2247 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 353 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 412 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 413 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 472 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtgacgttccgggaggcggaggc 402 ||| ||||||| | ||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 473 cgacaagaacaccggcagatccaagggctacggatttgttacattccgcgagccggaggc 532
>dbj|AK065654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035J16, full insert sequence Length = 1743 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 348 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 407 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 408 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 467 Query: 350 ctcaccggccgctccaagggctacggattcgtgacgttccggga 393 ||| || | ||||||||||||||||||||||| |||||||| Sbjct: 468 gccacggggaggtccaagggctacggattcgtgaccttccggga 511
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 42240594 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 42240653 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 42240654 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 42240713 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtga 383 ||| ||||||| | ||||||||||||||||| |||| Sbjct: 42240714 cgacaagaacaccggcagatccaagggctacggatttgtga 42240754 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 352 caccggccgctccaagggctacggattcgtgacgttccg 390 |||||||||||||||||||||||| ||||| |||||||| Sbjct: 24367865 caccggccgctccaagggctacgggttcgtcacgttccg 24367827 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 28709145 tccgggaggcggaggcggcgcgc 28709167 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 35032516 ccgggaggcggaggcggcgcgc 35032537 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 5866934 tggcggcggcgtcgtcgtcg 5866953
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 12551 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 12610 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 12611 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 12670 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtga 383 ||| ||||||| | ||||||||||||||||| |||| Sbjct: 12671 cgacaagaacaccggcagatccaagggctacggatttgtga 12711
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 113792 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 113851 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 113852 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 113911 Query: 343 ggaccgcctcaccggccgctccaagggctacggattcgtga 383 ||| ||||||| | ||||||||||||||||| |||| Sbjct: 113912 cgacaagaacaccggcagatccaagggctacggatttgtga 113952
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 99.6 bits (50), Expect = 8e-18 Identities = 128/154 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 8500 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 8441 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 8440 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 8381 Query: 350 ctcaccggccgctccaagggctacggattcgtga 383 ||| || | |||||||||||||||||||||| Sbjct: 8380 gccacggggaggtccaagggctacggattcgtga 8347
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 99.6 bits (50), Expect = 8e-18 Identities = 128/154 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 158012 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 157953 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 157952 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 157893 Query: 350 ctcaccggccgctccaagggctacggattcgtga 383 ||| || | |||||||||||||||||||||| Sbjct: 157892 gccacggggaggtccaagggctacggattcgtga 157859
>dbj|AK073538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041C14, full insert sequence Length = 1900 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 320 atcctggaggccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattc 379 ||||| |||||||| |||||||| ||||||| | |||||||||||||||||||||| ||| Sbjct: 221 atcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaagggctacggcttc 280 Query: 380 gtgacgttccg 390 ||||||||||| Sbjct: 281 gtgacgttccg 291 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 118 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 177
>dbj|AK067428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D05, full insert sequence Length = 2190 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 320 atcctggaggccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattc 379 ||||| |||||||| |||||||| ||||||| | |||||||||||||||||||||| ||| Sbjct: 379 atcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaagggctacggcttc 438 Query: 380 gtgacgttccg 390 ||||||||||| Sbjct: 439 gtgacgttccg 449 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 276 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 335
>gb|BT016236.1| Zea mays clone Contig69 mRNA sequence Length = 1357 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Minus Query: 242 accaaggtgttcgtgggcgggctggcgtgggagacgccgtcggaggggctccggcagcac 301 |||||||| ||||||||||| || || |||||||||| | |||||||| || ||| Sbjct: 1161 accaaggttttcgtgggcggcctcgcctgggagacgcggagtgaggggcttcgcgcccac 1102 Query: 302 ttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgcctcaccggccgc 361 || ||| ||||| |||||||| |||||||| |||||||| |||||| ||| |||||| Sbjct: 1101 tttgaggtctacggggacatcctcgaggccgttgtcatcaccgaccgcgccacaggccgc 1042 Query: 362 tccaagggctacggattcgt 381 |||||||||||||||||||| Sbjct: 1041 tccaagggctacggattcgt 1022
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 320 atcctggaggccgtggtcatcacggaccgcctcaccggccgctccaagggctacggattc 379 ||||| |||||||| |||||||| ||||||| | |||||||||||||||||||||| ||| Sbjct: 71214 atcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaagggctacggcttc 71273 Query: 380 gt 381 || Sbjct: 71274 gt 71275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 71111 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 71170
>ref|NM_202159.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.2 mRNA, complete cds Length = 1273 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 157 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 201
>ref|NM_102138.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.1 mRNA, complete cds Length = 1474 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 376 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 420
>ref|NM_202160.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.3 mRNA, complete cds Length = 1478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 376 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 420
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgcctcaccggc 358 ||||||||||||| |||||| ||| | |||||||| |||||| | ||| | ||||||| Sbjct: 46301 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 46360 Query: 359 cgctccaagggctacgg 375 ||||||||||||||||| Sbjct: 46361 cgctccaagggctacgg 46377
>gb|AF367334.1| Arabidopsis thaliana At1g22910/F19G10_13 mRNA, complete cds Length = 1478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 380 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 424
>gb|AY058222.1| Arabidopsis thaliana At1g22910/F19G10_13 mRNA, complete cds Length = 750 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 157 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 201
>emb|BX813829.1|CNS0AC93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 246 tccaagggctacggattcgtgacattcagggaagcggaggcggcg 290
>ref|NM_192778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 352 caccggccgctccaagggctacggattcgtgacgttccg 390 |||||||||||||||||||||||| ||||| |||||||| Sbjct: 336 caccggccgctccaagggctacgggttcgtcacgttccg 374
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 352 caccggccgctccaagggctacggattcgtgacgttccg 390 |||||||||||||||||||||||| ||||| |||||||| Sbjct: 113769 caccggccgctccaagggctacgggttcgtcacgttccg 113731
>dbj|AK120636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K01, full insert sequence Length = 1754 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 352 caccggccgctccaagggctacggattcgtgacgttccg 390 |||||||||||||||||||||||| ||||| |||||||| Sbjct: 404 caccggccgctccaagggctacgggttcgtcacgttccg 442
>ref|XM_520667.1| PREDICTED: Pan troglodytes similar to hypothetical gene supported by AK044523 (LOC465199), mRNA Length = 4032 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 3463 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 3426
>gb|BC018711.1| Homo sapiens RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:31775 IMAGE:4852523), complete cds Length = 2162 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 107 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 144
>emb|X75315.1|HSRNASEB4 H.sapiens seb4B mRNA Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 145 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 182
>emb|X75314.1|HSRNASEB H.sapiens seb4D mRNA Length = 1435 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 142 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 179
>gb|AF432218.1| Homo sapiens CLL-associated antigen KW-5 mRNA, complete cds Length = 2376 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 351 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 388
>ref|NM_017495.4| Homo sapiens RNA-binding region (RNP1, RRM) containing 1 (RNPC1), transcript variant 1, mRNA Length = 2401 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 346 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 383
>ref|NM_183425.1| Homo sapiens RNA-binding region (RNP1, RRM) containing 1 (RNPC1), transcript variant 2, mRNA Length = 2346 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 346 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 383
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||||| ||||||| Sbjct: 59971 gatggcggcggcgtcgtcgtcgtcggcgtc 60000
>emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J21 on chromosome 20, complete sequence Length = 108458 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 32765 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 32802
>ref|NM_202440.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G78260 transcript variant AT1G78260.2 mRNA, complete cds Length = 2306 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 368 ggctacggattcgtgacgttccgggaggcgga 399 |||||||||||||||||||| |||||| |||| Sbjct: 507 ggctacggattcgtgacgtttcgggagtcgga 538
>ref|NM_106475.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G78260 transcript variant AT1G78260.1 mRNA, complete cds Length = 1530 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 368 ggctacggattcgtgacgttccgggaggcgga 399 |||||||||||||||||||| |||||| |||| Sbjct: 507 ggctacggattcgtgacgtttcgggagtcgga 538
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 75846 gcggcggcgtcgtcgtcgacggcg 75823
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| |||||||| Sbjct: 148444 ggcggcggcgtcgtcgtcgtcggcgtct 148471
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 19592771 gcggcggcgtcgtcgtcgacggcg 19592748 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 11904785 ggcggcggcgtcgtcgtcgtcggcg 11904809 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 1451682 gcgtcgtcgtcgacggcgtc 1451663
>gb|BT005760.1| Arabidopsis thaliana clone RAFL15-12-E19 (R20494) At1g78260 mRNA, complete sequence Length = 2330 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 368 ggctacggattcgtgacgttccgggaggcgga 399 |||||||||||||||||||| |||||| |||| Sbjct: 507 ggctacggattcgtgacgtttcgggagtcgga 538
>gb|AY084982.1| Arabidopsis thaliana clone 123429 mRNA, complete sequence Length = 1253 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 368 ggctacggattcgtgacgttccgggaggcgga 399 |||||||||||||||||||| |||||| |||| Sbjct: 347 ggctacggattcgtgacgtttcgggagtcgga 378
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 2253 gcggcggcgtcgtcgtcgacggcg 2230
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full insert sequence Length = 2096 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 289 gcggcggcgtcgtcgtcgacggcg 312
>dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full insert sequence Length = 2059 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 246 gcggcggcgtcgtcgtcgacggcg 269
>dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111O12, full insert sequence Length = 1993 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 180 gcggcggcgtcgtcgtcgacggcg 203
>ref|NM_208645.1| Eremothecium gossypii ACL112Cp (ACL112C), mRNA Length = 600 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| |||||||| Sbjct: 593 ggcggcggcgtcgtcgtcgtcggcgtct 566
>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b, complete sequence Length = 41851 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 241 gaccaaggtgttcgtgggcgggctggcgtgggagac 276 |||||| ||||||||||| |||||||| |||||||| Sbjct: 12003 gaccaaagtgttcgtgggagggctggcctgggagac 12038
>ref|XM_482994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3147 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 1340 tccgggaggcggaggcggcgcgc 1362
>ref|NM_192175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2856 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 1211 tccgggaggcggaggcggcgcgc 1233
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 116121 tccgggaggcggaggcggcgcgc 116143 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 95787 tccgggaggcggaggcggcgc 95767 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 36882 tccgggaggcggaggcggcgc 36862
>gb|AY190954.1| Drosophila virilis clone DVIF01_17_B21 (D1423) genomic sequence Length = 43155 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 394 ggcggaggcggcgcgccgggcggtgga 420 ||||||||||| ||||||||||||||| Sbjct: 40836 ggcggaggcggggcgccgggcggtgga 40862
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 cggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||||||| Sbjct: 1897536 cggcggcgtcgtcgtcgacggcg 1897514
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the 5' end of the gene for regulator of differentiation 1 (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a CpG island.n, complete sequence Length = 64850 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 390 gggaggcggaggcggcgcgccgggcgg 416 |||||||||||||||||||| |||||| Sbjct: 19295 gggaggcggaggcggcgcgcggggcgg 19269
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 100672 tccgggaggcggaggcggcgcgc 100650
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 19539033 tccgggaggcggaggcggcgcgc 19539055 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 19462233 tccgggaggcggaggcggcgc 19462213
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 23773492 tccgggaggcggaggcggcgcgc 23773514 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 12178455 tccgggaggcggaggcggcgcgc 12178477 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 28156433 gtgatggcggcggcgtcgtggtcg 28156456 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||| || |||||||||||||| Sbjct: 8612692 gatggcggcgacggcgtcgtcgacggcg 8612665 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 3320657 gatggcggcggcgtcggcgtcgtcggcg 3320684
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 92219 tccgggaggcggaggcggcgcgc 92241
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 62692 tccgggaggcggaggcggcgcgc 62714
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 51947 tccgggaggcggaggcggcgcgc 51969
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgcgc 409 ||||||||||||||||||||||| Sbjct: 19701018 tccgggaggcggaggcggcgcgc 19701040 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 19680684 tccgggaggcggaggcggcgc 19680664 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 19621779 tccgggaggcggaggcggcgc 19621759
>ref|NM_190357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3099 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 1455 ccgggaggcggaggcggcgcgc 1476
>gb|BC085307.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:102453 IMAGE:6396103), complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 259 ggaggccgtggtcatcaccgaccgcc 284
>ref|XM_612948.2| PREDICTED: Bos taurus similar to RNA-binding region containing protein 1 isoform a (LOC533516), mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 654 ggaggccgtggtcatcaccgaccgcc 679
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 ggaggcggcgcgccgggcggtggagg 422 |||||||||||||||||||| ||||| Sbjct: 63465 ggaggcggcgcgccgggcggaggagg 63440
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 ggaggcggcgcgccgggcggtggagg 422 |||||||||||||||||||| ||||| Sbjct: 31275 ggaggcggcgcgccgggcggaggagg 31250
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 ggaggcggcgcgccgggcggtggagg 422 |||||||||||||||||||| ||||| Sbjct: 62075 ggaggcggcgcgccgggcggaggagg 62050
>ref|XM_847261.1| PREDICTED: Canis familiaris similar to forkhead box A1 (LOC490657), mRNA Length = 2109 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 391 ggaggcggaggcggcgcgccgggcgg 416 |||||||||||||||||| ||||||| Sbjct: 253 ggaggcggaggcggcgcggcgggcgg 228
>gb|BC006687.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:6122 IMAGE:3582604), complete cds Length = 2308 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 304 ggaggccgtggtcatcaccgaccgcc 329
>emb|X75316.1|MMRNASEB4 M.musculus seb4 mRNA Length = 1908 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 412 ggaggccgtggtcatcaccgaccgcc 437
>ref|NM_019547.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1 (Rnpc1), mRNA Length = 1908 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 412 ggaggccgtggtcatcaccgaccgcc 437
>dbj|AK146026.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530025A03 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1742 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 289 ggaggccgtggtcatcaccgaccgcc 314
>dbj|AK162141.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420435H15 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1101 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 288 ggaggccgtggtcatcaccgaccgcc 313
>dbj|AK166609.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0037B01 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 889 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 316 ggaggccgtggtcatcaccgaccgcc 341
>ref|XM_345477.2| PREDICTED: Rattus norvegicus RNA-binding region (RNP1, RRM) containing 1 (predicted) (Rnpc1_predicted), mRNA Length = 1982 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 522 ggaggccgtggtcatcaccgaccgcc 547
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 39666 ccgggaggcggaggcggcgcgc 39687
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 76744 ccgggaggcggaggcggcgcgc 76765
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 144231 ccgggaggcggaggcggcgcgc 144252
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 65845 ccgggaggcggaggcggcgcgc 65866
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 102843 ccgggaggcggaggcggcgcgc 102864
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 47181 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 47148
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ccgggaggcggaggcggcgcgc 409 |||||||||||||||||||||| Sbjct: 105729 ccgggaggcggaggcggcgcgc 105750
>dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F02, full insert sequence Length = 2216 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 52 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 85
>emb|BX470106.8| Zebrafish DNA sequence from clone DKEY-11P6 in linkage group 4, complete sequence Length = 41017 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcg 199 |||||||||||||||||||||| Sbjct: 31870 gatggcggcggcgtcgtcgtcg 31891
>emb|AL928599.5| Mouse DNA sequence from clone RP23-368M21 on chromosome 2, complete sequence Length = 113764 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 40963 ggaggccgtggtcatcaccgaccgcc 40988
>gb|AC107050.3| Homo sapiens BAC clone RP11-182A9 from 4, complete sequence Length = 167699 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 265 ggcgtgggagacgccgtcggaggggctccg 294 ||||||||| |||||| ||||||||||||| Sbjct: 75083 ggcgtgggaaacgccgccggaggggctccg 75054
>ref|XM_550342.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1834 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ggaggcggaggcggcgcgccg 411 ||||||||||||||||||||| Sbjct: 612 ggaggcggaggcggcgcgccg 592
>ref|XM_450634.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1815 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 426 ggcggcggcgtcgtcgtcgtcggcg 450
>ref|NM_195606.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0036B06.6), mRNA Length = 2994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 1580 tccgggaggcggaggcggcgc 1600
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 1026 tgatggcggcggcggcgtcgtcgac 1002
>gb|DQ119664.1| Chlamydomonas reinhardtii central apparatus associated protein C1a-32 mRNA, complete cds Length = 861 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 391 ggaggcggaggcggcgcgccgggcggtggagga 423 ||||||||||||||||||| ||||| |||||| Sbjct: 555 ggaggcggaggcggcgcgcaaggcggcggagga 587
>gb|AY022810.1| Oryza sativa microsatellite MRG5135 containing (CGC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 110 ggcggcggcgtcgtcggcgacggcg 86
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcggtgga 420 |||||||||||| ||||||||||| |||| Sbjct: 12020 gaggcggaggcgtcgcgccgggcgctgga 12048
>ref|XM_419500.1| PREDICTED: Gallus gallus similar to RANBP21 (LOC421450), mRNA Length = 2802 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 ggaggcggaggcggcgcgccgggcg 415 ||||||||||||||||||| ||||| Sbjct: 3 ggaggcggaggcggcgcgcggggcg 27
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||| ||||||||||| Sbjct: 188758 ggcggcggcgtcggcgtcgacggcg 188734 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||| ||||||||||| Sbjct: 1297 ggcggcggcgtcggcgtcgacggcg 1321
>ref|XM_752325.1| Ustilago maydis 521 hypothetical protein (UM01271.1) partial mRNA Length = 3180 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ctccaagggctacggattcgt 381 ||||||||||||||||||||| Sbjct: 1242 ctccaagggctacggattcgt 1262
>ref|XM_533918.2| PREDICTED: Canis familiaris similar to Non-receptor tyrosine-protein kinase TYK2 (LOC476714), mRNA Length = 5586 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 caccggccgctccaagggctacggattcg 380 |||||||| ||||||||||||||| |||| Sbjct: 3864 caccggccactccaagggctacggcttcg 3892
>ref|XM_539204.2| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 1 (LOC482083), mRNA Length = 15160 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6661 gaggcggaggcggcgcggcgggcgg 6685
>ref|XM_852242.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 8 (LOC482083), mRNA Length = 14734 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6235 gaggcggaggcggcgcggcgggcgg 6259
>ref|XM_852201.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 7 (LOC482083), mRNA Length = 14734 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6235 gaggcggaggcggcgcggcgggcgg 6259
>ref|XM_852160.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 6 (LOC482083), mRNA Length = 15175 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6676 gaggcggaggcggcgcggcgggcgg 6700
>ref|XM_852120.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 5 (LOC482083), mRNA Length = 14749 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6250 gaggcggaggcggcgcggcgggcgg 6274
>ref|XM_852074.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 4 (LOC482083), mRNA Length = 14863 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6364 gaggcggaggcggcgcggcgggcgg 6388
>ref|XM_843706.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 2 (LOC482083), mRNA Length = 14812 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| ||||||| Sbjct: 6313 gaggcggaggcggcgcggcgggcgg 6337
>emb|CR956362.5| Pig DNA sequence from clone CH242-98D1 on chromosome 17, complete sequence Length = 212503 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gaggccgtggtcatcacggaccgcc 350 ||||||||||||||||| ||||||| Sbjct: 114670 gaggccgtggtcatcaccgaccgcc 114694
>emb|AJ719481.1| Gallus gallus mRNA for hypothetical protein, clone 2l21 Length = 2839 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 440 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 488
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 154604 ggcggcggcgtcgtcgtcgtcggcg 154580 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 127820 ggcggcggcgtcgtcgtcgtcggcg 127844
>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0036B06, from Chromosome 10, complete sequence Length = 148263 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 54289 tccgggaggcggaggcggcgc 54269
>emb|CR385490.1| Gallus gallus finished cDNA, clone ChEST962o16 Length = 1116 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 213 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 261
>emb|BX933592.2| Gallus gallus finished cDNA, clone ChEST53h23 Length = 1321 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 418 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 466
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 7916969 tccgggaggcggaggcggcgc 7916989 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10673463 ggcggcggcgtcgtcgtcgccggc 10673440 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10671818 ggcggcggcgtcgtcgtcgccggc 10671841
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 2161046 tgatggcggcggcggcgtcgtcgac 2161070 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 cgttccgggaggcggaggcggcgc 407 ||||||||| |||||||||||||| Sbjct: 26254876 cgttccgggcggcggaggcggcgc 26254853 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcga 200 |||||||||||||||||||| Sbjct: 4276262 ggcggcggcgtcgtcgtcga 4276243
>ref|NM_001012863.1| Gallus gallus similar to Hypothetical protein MGC75808 (LOC420846), mRNA Length = 2839 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 440 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 488
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 54915 ggcggcggcgtcgtcggcgacggcg 54891
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 93254 ggcggcggcgtcgtcgtcggcggcg 93278
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ggaggcggaggcggcgcgccg 411 ||||||||||||||||||||| Sbjct: 85009 ggaggcggaggcggcgcgccg 84989
>gb|AY830102.1| Phytophthora infestans gypsy-like retrotransposon GypsyPi-1c, complete sequence Length = 8220 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtctg 209 |||||||||||| | |||||||||||||| Sbjct: 2409 ggcggcggcgtctttgtcgacggcgtctg 2381
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 86275 ggcggcggcgtcgtcgtcgtcggcg 86299
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 9265 ggcggcggcgtcgtcgtcgtcggcg 9289
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 28948 tgatggcggcggcggcgtcgtcgac 28972
>dbj|AK110296.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-H06, full insert sequence Length = 3118 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ctccaagggctacggattcgt 381 ||||||||||||||||||||| Sbjct: 823 ctccaagggctacggattcgt 843
>dbj|AK106234.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B09, full insert sequence Length = 1834 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ggaggcggaggcggcgcgccg 411 ||||||||||||||||||||| Sbjct: 612 ggaggcggaggcggcgcgccg 592
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 1026 tgatggcggcggcggcgtcgtcgac 1002
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 116839 tgatggcggcggcggcgtcgtcgac 116863
>gb|AY106445.1| Zea mays PCO092755 mRNA sequence Length = 1052 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 362 tccaagggctacggattcgtgacgttccgggaggcggaggcggcg 406 ||||||||||||||||| || || |||||||| |||| |||||| Sbjct: 301 tccaagggctacggatttgttaccttccgggactcggatgcggcg 345
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 385 gttccgggaggcggaggcggcgcgccggg 413 |||||||||||||||||||| |||||||| Sbjct: 3470484 gttccgggaggcggaggcgg-gcgccggg 3470511 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccg 332 |||||||||||||||||||| Sbjct: 1342233 cggcgacatcctggaggccg 1342252
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tccgggaggcggaggcggcgc 407 ||||||||||||||||||||| Sbjct: 7922068 tccgggaggcggaggcggcgc 7922088 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10679502 ggcggcggcgtcgtcgtcgccggc 10679479 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10677857 ggcggcggcgtcgtcgtcgccggc 10677880
>ref|NM_188362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 602 tggcggcggcgtcgtcgtcg 583
>ref|XM_483799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1135 gtgatggcggcggcgtcgtggtcg 1112
>ref|XM_480184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 581 gatggcggcggcgtcggcgtcgtcggcg 554
>ref|XM_474133.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 1114 tggcggcggcgccgtcgtcgatggcgtc 1087
>ref|XM_467899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 130 gcggcgtcgtcgtcgacggc 149
>ref|XM_466699.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cggcgcgccgggcggtggag 421 |||||||||||||||||||| Sbjct: 968 cggcgcgccgggcggtggag 949
>ref|XM_450076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 387 gcgtcgtcgtcgacggcgtc 406
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 accgcctcaccggccgctccaagg 368 |||||| ||||||||||||||||| Sbjct: 176942 accgccccaccggccgctccaagg 176919
>ref|NM_196041.1| Oryza sativa (japonica cultivar-group) putative receptor kinase-like protein (OSJNBa0073L01.5), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 136 ggcggcggcgtcgtcgtcgccggc 159
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggtcgcggttcggcgacacg 235 |||||||||||||||||||| Sbjct: 1671653 ggtcgcggttcggcgacacg 1671634
>ref|XM_469284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 243 ggcggcggcgtcgtcgtcgtcgtcgtct 216
>ref|XM_479245.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 cgttccgggaggcggaggcggcgc 407 ||||||||| |||||||||||||| Sbjct: 439 cgttccgggcggcggaggcggcgc 416
>ref|XM_472973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 38 tggcggcggcgtcgtcgtcg 57
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 9033 ggcggcggcgtcgtcgtcgccggc 9010 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 7388 ggcggcggcgtcgtcgtcgccggc 7411
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 attaaccagccagttcaacc 74 |||||||||||||||||||| Sbjct: 154785 attaaccagccagttcaacc 154766
>ref|XM_323942.1| Neurospora crassa OR74A hypothetical protein (NCU04587.1) partial mRNA Length = 4749 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 4049 gcggcggcgtcgtcgtcgac 4030
>ref|XM_417367.1| PREDICTED: Gallus gallus similar to embryonic poly(A) binding protein (LOC419189), mRNA Length = 2079 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 caccggccgctccaagggct 371 |||||||||||||||||||| Sbjct: 789 caccggccgctccaagggct 808
>ref|XM_422088.1| PREDICTED: Gallus gallus similar to LOC398645 protein (LOC424239), mRNA Length = 1346 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gctccggcagcacttcgagcagtacggc 316 |||||||||| |||||||||||| |||| Sbjct: 222 gctccggcagtacttcgagcagttcggc 249
>ref|XM_953195.1| Neurospora crassa OR74A hypothetical protein (NCU04587.1) partial mRNA Length = 4749 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 4049 gcggcggcgtcgtcgtcgac 4030
>gb|AY579411.1| Oryza sativa (japonica cultivar-group) RING/C3HC4/PHD zinc finger-like protein mRNA, complete cds Length = 1670 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 117 gcggcgtcgtcgtcgacggc 136
>ref|XM_503723.1| Yarrowia lipolytica CLIB122, YALI0E09174g predicted mRNA Length = 762 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 accggccgctccaagggctacggattcg 380 |||||||| || |||||||||||||||| Sbjct: 121 accggccgttcaaagggctacggattcg 148
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ggaggcggcgcgccgggcgg 416 |||||||||||||||||||| Sbjct: 1343287 ggaggcggcgcgccgggcgg 1343306
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 83491 gcggcggcgtcgtcgtcgac 83510
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggcgtcgtcgtcgacggcg 205 |||||||||||||||||||| Sbjct: 77965 cggcgtcgtcgtcgacggcg 77946
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 171199 tggcggcggcgtcgtcgtcg 171180
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gggaggcggaggcggcgcgc 409 |||||||||||||||||||| Sbjct: 26216 gggaggcggaggcggcgcgc 26197
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 3205 tggcggcggcgtcgtcgtcg 3186
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 131958 tggcggcggcgtcgtcgtcg 131939
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 caccggccgctccaagggct 371 |||||||||||||||||||| Sbjct: 4701661 caccggccgctccaagggct 4701680
>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete sequence Length = 179199 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 4231 ggcggcggcgtcgtcgtcgccggc 4208 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 2586 ggcggcggcgtcgtcgtcgccggc 2609
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ctgagggcggcgcgccggaa 55 |||||||||||||||||||| Sbjct: 1831162 ctgagggcggcgcgccggaa 1831143
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgac 201 ||||||| |||||||||||||||| Sbjct: 91798 gatggcgacggcgtcgtcgtcgac 91821
>dbj|AK165039.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130314D17 product:unclassifiable, full insert sequence Length = 5546 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 attaaccagccagttcaacc 74 |||||||||||||||||||| Sbjct: 1064 attaaccagccagttcaacc 1083
>dbj|AK172625.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830221A19 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccg 348 |||||||||||||||||| ||||| Sbjct: 286 ggaggccgtggtcatcaccgaccg 309
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 33172677 tggcggcggcgccgtcgtcgatggcgtc 33172704 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 24415547 tggcggcggcgtcgtcgtcg 24415528 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 24006226 tggcggcggcgtcgtcgtcg 24006207 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gggaggcggaggcggcgcgc 409 |||||||||||||||||||| Sbjct: 21504127 gggaggcggaggcggcgcgc 21504108
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 25664713 gcggcggcggcgtcgtcgacggcg 25664690
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 49661 ggcggcggcgtcgtcgtcgtcgtcgtct 49688
>gb|AY826937.1| Heterocapsa triquetra clone HTU14 unknown protein mRNA, partial cds Length = 461 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 191 ggcggcggcgtcgtcgtcgccggc 168
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgagcagtacggcgacatc 322 |||||||||||||||||||| Sbjct: 3158578 tcgagcagtacggcgacatc 3158597
>emb|BX930757.1| Gallus gallus finished cDNA, clone ChEST967p13 Length = 1203 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gctccggcagcacttcgagcagtacggc 316 |||||||||| |||||||||||| |||| Sbjct: 196 gctccggcagtacttcgagcagttcggc 223
>ref|XM_573113.1| PREDICTED: Rattus norvegicus similar to novel protein (LOC497926), mRNA Length = 2580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcg 406 |||||||||||||||||||| Sbjct: 627 tccgggaggcggaggcggcg 608
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_F01 Length = 120026 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ccgggaggcggaggcggcgc 407 |||||||||||||||||||| Sbjct: 62611 ccgggaggcggaggcggcgc 62592
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 cgttccgggaggcggaggcggcgc 407 ||||||||| |||||||||||||| Sbjct: 29504 cgttccgggcggcggaggcggcgc 29481
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 70675 tggcggcggcgtcgtcgtcg 70694
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 7471 tggcggcggcgtcgtcgtcg 7452
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 60422 tggcggcggcgtcgtcgtcg 60403
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||| || |||||||||||||| Sbjct: 124603 gatggcggcgacggcgtcgtcgacggcg 124576
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 147428 gcggcgtcgtcgtcgacggc 147447
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 69795 gcgtcgtcgtcgacggcgtc 69776
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcga 200 |||||||||||||||||||| Sbjct: 97316 ggcggcggcgtcgtcgtcga 97297
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 aggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| |||||| Sbjct: 51363 aggcggaggcggcgcgcggggcgg 51386
>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519B12 Length = 147542 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 aggcggaggcggcgcgccgggcgg 416 ||||||||||||||||| |||||| Sbjct: 116275 aggcggaggcggcgcgcggggcgg 116298
>gb|AE005020.1| Halobacterium sp. NRC-1 section 51 of 170 of the complete genome Length = 9823 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcggcgtcgtcgtcgacggcgtc 207 ||||||| |||||||||||||||| Sbjct: 861 ggcggcgacgtcgtcgacggcgtc 838
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cggcgcgccgggcggtggag 421 |||||||||||||||||||| Sbjct: 141757 cggcgcgccgggcggtggag 141776
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 6802 gcggcgtcgtcgtcgacggc 6821
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 153928 gtgatggcggcggcgtcgtggtcg 153951
>dbj|AK109443.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A03, full insert sequence Length = 1649 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1110 gtgatggcggcggcgtcgtggtcg 1087
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 39906 gtgatggcggcggcgtcgtggtcg 39929
>dbj|AK120849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F02, full insert sequence Length = 3155 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 173 tggcggcggcgtcgtcgtcg 192
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 98224 gatggcggcggcgtcggcgtcgtcggcg 98251
>emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD basal apparatus-protein Length = 2767 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 gaggcggaggcggcgcgccg 411 |||||||||||||||||||| Sbjct: 1830 gaggcggaggcggcgcgccg 1849
>dbj|AK108144.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E12, full insert sequence Length = 1223 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 581 gatggcggcggcgtcggcgtcgtcggcg 554
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agcagtacggcgacatcctg 325 |||||||||||||||||||| Sbjct: 2847821 agcagtacggcgacatcctg 2847802
>dbj|AK067456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107I10, full insert sequence Length = 1735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 130 gcggcgtcgtcgtcgacggc 149
>dbj|AK063515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G07, full insert sequence Length = 2418 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1713 gtgatggcggcggcgtcgtggtcg 1690
>dbj|AK059022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B05, full insert sequence Length = 1579 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 387 gcgtcgtcgtcgacggcgtc 406
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 cgttccgggaggcggaggcggcgc 407 ||||||||| |||||||||||||| Sbjct: 146734 cgttccgggcggcggaggcggcgc 146711
>gb|AY738476.1| Gemmata sp. Wa1-1 unknown gene Length = 366 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 338 atcacggaccgcctcaccggccgctccaagggctacggattcgt 381 |||| ||||||| |||||||||||| ||||||| ||| ||||| Sbjct: 214 atcatggaccgcgacaccggccgctcgaagggcttcgggttcgt 257
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 63156 tggcggcggcgccgtcgtcgatggcgtc 63183
>dbj|AP001150.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778O17, complete sequence Length = 157282 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tccgggaggcggaggcggcg 406 |||||||||||||||||||| Sbjct: 106116 tccgggaggcggaggcggcg 106097
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggaggcggcgcgccgggcgg 416 |||||||||||||||||||| Sbjct: 3754020 ggaggcggcgcgccgggcgg 3754001
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cggcgtcgtcgtcgacggcg 205 |||||||||||||||||||| Sbjct: 1291107 cggcgtcgtcgtcgacggcg 1291126
>gb|AF068186.1|AF068186 Spodoptera exigua nucleopolyhedrovirus DNA polymerase (dpol) gene, partial cds Length = 1910 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgac 201 ||||||| |||||||||||||||| Sbjct: 1078 gatggcgacggcgtcgtcgtcgac 1101
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 25592889 gcggcggcggcgtcgtcgacggcg 25592866
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 31951 gcggcggcggcgtcgtcgacggcg 31928
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 8961 gcggcggcggcgtcgtcgacggcg 8984
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 55326 tggcggcggcgccgtcgtcgatggcgtc 55353
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 8869 tggcggcggcgtcgtcgtcg 8850
>gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, complete sequence Length = 92948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 tccaagggctacggattcgt 381 |||||||||||||||||||| Sbjct: 65077 tccaagggctacggattcgt 65058
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 353 accggccgctccaagggctacggattcg 380 |||||||| || |||||||||||||||| Sbjct: 1097594 accggccgttcaaagggctacggattcg 1097567
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gtgacgttccgggaggcgga 399 |||||||||||||||||||| Sbjct: 419403 gtgacgttccgggaggcgga 419384 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,770,956 Number of Sequences: 3902068 Number of extensions: 2770956 Number of successful extensions: 120125 Number of sequences better than 10.0: 218 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113972 Number of HSP's gapped (non-prelim): 6082 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
