| Clone Name | bast56c01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PHF8_MOUSE (Q80TJ7) PHD finger protein 8 | 29 | 3.0 | 2 | FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 ac... | 29 | 3.9 | 3 | HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li... | 28 | 6.7 |
|---|
>PHF8_MOUSE (Q80TJ7) PHD finger protein 8| Length = 1023 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 5 QTRPDQTNQRRTAPHPSHQTSSQPDSKRAPE 97 Q RP +N T P P+ T+ QPD+ +P+ Sbjct: 904 QPRPQDSNPIMTMPAPTVATTPQPDTSSSPQ 934
>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)| Length = 1194 Score = 28.9 bits (63), Expect = 3.9 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -3 Query: 179 AEPRPPEEDTSRWCCCS 129 +EP PPE D SR C CS Sbjct: 743 SEPSPPEVDVSRQCVCS 759
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 28.1 bits (61), Expect = 6.7 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = +2 Query: 5 QTRPDQTNQRRTAPHPSHQTSSQPDSKRAP 94 ++ P+Q+ Q++ AP PS +P K P Sbjct: 1336 ESGPEQSKQKKVAPRPSIPVKQKPKEKEKP 1365 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.124 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,878,452 Number of Sequences: 219361 Number of extensions: 382102 Number of successful extensions: 1010 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1006 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)