ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 |||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||||| Sbjct: 74295 cttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacctg 74354 Query: 238 gctcaaggccctcgccttcgccacgcgcaaccgcgccgaccacccgcc 285 ||||||||| ||||||||||| |||| |||||| |||| | ||||||| Sbjct: 74355 gctcaaggcgctcgccttcgcgacgctcaaccgggccgcctacccgcc 74402 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 ||||||||||||||| || |||||| |||||| |||||||||||||| |||||||||||| Sbjct: 115761 cttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctg 115820 Query: 238 gctcaaggccctcgccttcgc 258 ||||||||| ||||||||||| Sbjct: 115821 gctcaaggcgctcgccttcgc 115841 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 179 ttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctgg 238 |||||| ||||||| || |||||| ||| | ||||| ||||||| ||||||||||||| Sbjct: 83549 ttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacctgg 83608 Query: 239 ctcaaggccctcgccttcgc 258 |||||||| || |||||||| Sbjct: 83609 ctcaaggcgcttgccttcgc 83628 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 84 tggagacgcggttcccgccgttccgtcttcggcagtacggcgggttctggct 135 ||||||| |||| ||||||||||| || || ||||||||||| |||||||| Sbjct: 83454 tggagacacggtgcccgccgttcccactgcgccagtacggcggcttctggct 83505 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 402 tgctcgccacgcacctgccctactccctcctgcc 435 |||||||||| ||| | ||||||||||||||||| Sbjct: 116054 tgctcgccactcacatcccctactccctcctgcc 116087
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 |||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||||| Sbjct: 100288 cttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacctg 100347 Query: 238 gctcaaggccctcgccttcgccacgcgcaaccgcgccgaccacccgcc 285 ||||||||| ||||||||||| |||| |||||| |||| | ||||||| Sbjct: 100348 gctcaaggcgctcgccttcgcgacgctcaaccgggccgcctacccgcc 100395 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 ||||||||||||||| || |||||| |||||| |||||||||||||| |||||||||||| Sbjct: 141754 cttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctg 141813 Query: 238 gctcaaggccctcgccttcgc 258 ||||||||| ||||||||||| Sbjct: 141814 gctcaaggcgctcgccttcgc 141834 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 179 ttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctgg 238 |||||| ||||||| || |||||| ||| | ||||| ||||||| ||||||||||||| Sbjct: 109542 ttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacctgg 109601 Query: 239 ctcaaggccctcgccttcgc 258 |||||||| || |||||||| Sbjct: 109602 ctcaaggcgcttgccttcgc 109621 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 84 tggagacgcggttcccgccgttccgtcttcggcagtacggcgggttctggct 135 ||||||| |||| ||||||||||| || || ||||||||||| |||||||| Sbjct: 109447 tggagacacggtgcccgccgttcccactgcgccagtacggcggcttctggct 109498 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 402 tgctcgccacgcacctgccctactccctcctgcc 435 |||||||||| ||| | ||||||||||||||||| Sbjct: 142047 tgctcgccactcacatcccctactccctcctgcc 142080
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 |||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||||| Sbjct: 17345364 cttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacctg 17345423 Query: 238 gctcaaggccctcgccttcgccacgcgcaaccgcgccgaccacccgcc 285 ||||||||| ||||||||||| |||| |||||| |||| | ||||||| Sbjct: 17345424 gctcaaggcgctcgccttcgcgacgctcaaccgggccgcctacccgcc 17345471 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 ||||||||||||||| || |||||| |||||| |||||||||||||| |||||||||||| Sbjct: 17386979 cttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctg 17387038 Query: 238 gctcaaggccctcgccttcgc 258 ||||||||| ||||||||||| Sbjct: 17387039 gctcaaggcgctcgccttcgc 17387059 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||||| ||| | ||||||||||||||||| |||||||||||||| |||||| Sbjct: 8623288 gacgtggtcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttc 8623229 Query: 257 gccacg 262 |||||| Sbjct: 8623228 gccacg 8623223 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 179 ttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctgg 238 |||||| ||||||| || |||||| ||| | ||||| ||||||| ||||||||||||| Sbjct: 17354618 ttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacctgg 17354677 Query: 239 ctcaaggccctcgccttcgc 258 |||||||| || |||||||| Sbjct: 17354678 ctcaaggcgcttgccttcgc 17354697 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 1892892 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 1892841 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 84 tggagacgcggttcccgccgttccgtcttcggcagtacggcgggttctggct 135 ||||||| |||| ||||||||||| || || ||||||||||| |||||||| Sbjct: 17354523 tggagacacggtgcccgccgttcccactgcgccagtacggcggcttctggct 17354574 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 212 agcttccccaagtgcggcaccacctggctcaaggccctcgcctt 255 ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 14537144 agctttcctaagtgtggtaccacctggctcaaagccctcgcctt 14537101 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 402 tgctcgccacgcacctgccctactccctcctgcc 435 |||||||||| ||| | ||||||||||||||||| Sbjct: 17387272 tgctcgccactcacatcccctactccctcctgcc 17387305 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||| |||| ||||||||||||||| ||||| Sbjct: 1914513 cttccctaagtccggcaccacctggcttaaggc 1914481 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 ||||||||||| | ||||||| ||||||||||| Sbjct: 1895026 cttccccaagtccagcaccacttggctcaaggc 1894994 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaa 243 |||||| || ||||||||||| ||||||||| ||| |||| Sbjct: 1911107 tcctcgtcaccttccccaagtccggcaccacttggatcaa 1911068
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 |||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||||| Sbjct: 230 cttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacctg 289 Query: 238 gctcaaggccctcgccttcgccacgcgcaaccgcgccgaccacccgcc 285 ||||||||| ||||||||||| |||| |||||| |||| | ||||||| Sbjct: 290 gctcaaggcgctcgccttcgcgacgctcaaccgggccgcctacccgcc 337
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 |||||||||| ||||||| |||||| |||||| ||||||||||||| |||||||||||| Sbjct: 17439223 cttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacctg 17439282 Query: 238 gctcaaggccctcgccttcgccacgcgcaaccgcgccgaccacccgcc 285 ||||||||| ||||||||||| |||| |||||| |||| | ||||||| Sbjct: 17439283 gctcaaggcgctcgccttcgcgacgctcaaccgggccgcctacccgcc 17439330 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 ||||||||||||||| || |||||| |||||| |||||||||||||| |||||||||||| Sbjct: 17480689 cttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctg 17480748 Query: 238 gctcaaggccctcgccttcgc 258 ||||||||| ||||||||||| Sbjct: 17480749 gctcaaggcgctcgccttcgc 17480769 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||||| ||| | ||||||||||||||||| |||||||||||||| |||||| Sbjct: 8694051 gacgtggtcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttc 8693992 Query: 257 gccacg 262 |||||| Sbjct: 8693991 gccacg 8693986 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 179 ttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctgg 238 |||||| ||||||| || |||||| ||| | ||||| ||||||| ||||||||||||| Sbjct: 17448477 ttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacctgg 17448536 Query: 239 ctcaaggccctcgccttcgc 258 |||||||| || |||||||| Sbjct: 17448537 ctcaaggcgcttgccttcgc 17448556 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 1890613 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 1890562 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 84 tggagacgcggttcccgccgttccgtcttcggcagtacggcgggttctggct 135 ||||||| |||| ||||||||||| || || ||||||||||| |||||||| Sbjct: 17448382 tggagacacggtgcccgccgttcccactgcgccagtacggcggcttctggct 17448433 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 212 agcttccccaagtgcggcaccacctggctcaaggccctcgcctt 255 ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 14619145 agctttcctaagtgtggtaccacctggctcaaagccctcgcctt 14619102 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 402 tgctcgccacgcacctgccctactccctcctgcc 435 |||||||||| ||| | ||||||||||||||||| Sbjct: 17480982 tgctcgccactcacatcccctactccctcctgcc 17481015 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||| |||| ||||||||||||||| ||||| Sbjct: 1912234 cttccctaagtccggcaccacctggcttaaggc 1912202 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 ||||||||||| | ||||||| ||||||||||| Sbjct: 1892747 cttccccaagtccagcaccacttggctcaaggc 1892715 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaa 243 |||||| || ||||||||||| ||||||||| ||| |||| Sbjct: 1908828 tcctcgtcaccttccccaagtccggcaccacttggatcaa 1908789
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 178 cttcgagccgaggccgtcggacgtcgtcctcggcagcttccccaagtgcggcaccacctg 237 ||||||||||||||| || |||||| |||||| |||||||||||||| |||||||||||| Sbjct: 205 cttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctg 264 Query: 238 gctcaaggccctcgccttcgc 258 ||||||||| ||||||||||| Sbjct: 265 gctcaaggcgctcgccttcgc 285 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 402 tgctcgccacgcacctgccctactccctcctgcc 435 |||||||||| ||| | ||||||||||||||||| Sbjct: 498 tgctcgccactcacatcccctactccctcctgcc 531
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 91.7 bits (46), Expect = 2e-15 Identities = 108/126 (85%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcc-acg 262 |||||| |||||||||||||| |||||||| |||||||||||| |||||||||||| || Sbjct: 58708 tcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgccgccg 58767 Query: 263 cgcaaccgcgccgaccacccgccgggcggcctcgaccacccgctccgccgccgcaacccc 322 || |||||||| | |||||||| || | |||||||||||||||||| |||||||| Sbjct: 58768 cg-aaccgcgcggcgcacccgccctccgacgccgaccacccgctccgccgtcgcaacccg 58826 Query: 323 cacgac 328 |||||| Sbjct: 58827 cacgac 58832 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 393 cgccgcgcgtgctcgccacgcacctgccctactccctcctgcc 435 ||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 58921 cgccgcgcgtgctcgccacccacctaccctactccctgctgcc 58963
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 91.7 bits (46), Expect = 2e-15 Identities = 108/126 (85%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcc-acg 262 |||||| |||||||||||||| |||||||| |||||||||||| |||||||||||| || Sbjct: 21712688 tcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgccgccg 21712747 Query: 263 cgcaaccgcgccgaccacccgccgggcggcctcgaccacccgctccgccgccgcaacccc 322 || |||||||| | |||||||| || | |||||||||||||||||| |||||||| Sbjct: 21712748 cg-aaccgcgcggcgcacccgccctccgacgccgaccacccgctccgccgtcgcaacccg 21712806 Query: 323 cacgac 328 |||||| Sbjct: 21712807 cacgac 21712812 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 393 cgccgcgcgtgctcgccacgcacctgccctactccctcctgcc 435 ||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 21712901 cgccgcgcgtgctcgccacccacctaccctactccctgctgcc 21712943
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol 3-sulfotransferase (OSJNBb0038H12.7), mRNA Length = 1005 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 184 gacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttc 243 Query: 257 gccac 261 ||||| Sbjct: 244 gccac 248
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 274 gacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttc 333 Query: 257 gccac 261 ||||| Sbjct: 334 gccac 338
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 19396 gacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttc 19455 Query: 257 gccac 261 ||||| Sbjct: 19456 gccac 19460
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 5904487 gacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttc 5904428 Query: 257 gccac 261 ||||| Sbjct: 5904427 gccac 5904423 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgggccacgcgctggcggcg 385 |||||||||||||||||||| Sbjct: 5938575 tgggccacgcgctggcggcg 5938594
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 2550952 gacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttc 2550893 Query: 257 gccac 261 ||||| Sbjct: 2550892 gccac 2550888 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 216 tccccaagtgcggcaccacctggctcaaggccctcgccttcgcc 259 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2542870 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 2542827 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2406825 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccac 2406782 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccacg 262 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 24853002 cccaagtgcggcaccacgtggctcaaggccctggccttcgccacg 24852958 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||| | ||||| |||||||||||||||||| ||||||||||| || |||||| Sbjct: 24791822 gacgtggtccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttc 24791881 Query: 257 gcc 259 ||| Sbjct: 24791882 gcc 24791884
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 115932 gacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttc 115873 Query: 257 gccac 261 ||||| Sbjct: 115872 gccac 115868 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 216 tccccaagtgcggcaccacctggctcaaggccctcgccttcgcc 259 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107850 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 107807
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 292 gacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttc 351 Query: 257 gccac 261 ||||| Sbjct: 352 gccac 356
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 5905673 gacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttc 5905614 Query: 257 gccac 261 ||||| Sbjct: 5905613 gccac 5905609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgggccacgcgctggcggcg 385 |||||||||||||||||||| Sbjct: 5939761 tgggccacgcgctggcggcg 5939780
>ref|NM_186313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 209 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccac 166
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109833 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccac 109790
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||||| ||| | ||||||||||||||||| |||||||||||||| |||||| Sbjct: 34454 gacgtggtcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttc 34395 Query: 257 gccacg 262 |||||| Sbjct: 34394 gccacg 34389
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccacg 262 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 36634 cccaagtgcggcaccacgtggctcaaggccctggccttcgccacg 36590
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 218 cccaagtgcggcaccacctggctcaaggccctcgccttcgccacg 262 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 87453 cccaagtgcggcaccacgtggctcaaggccctggccttcgccacg 87409 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||| | ||||| |||||||||||||||||| ||||||||||| || |||||| Sbjct: 26273 gacgtggtccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttc 26332 Query: 257 gcc 259 ||| Sbjct: 26333 gcc 26335
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 221 aagtgcggcaccacctggctcaaggccctcgccttcgcc 259 |||||||||||||||||||||||||| |||||||||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 9822641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 1822184 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 1822133 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaagg 245 ||||||||||| ||||||||| |||||||||| Sbjct: 1830756 cttccccaagtccggcaccacttggctcaagg 1830725 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaag 244 |||||| |||| ||||||||||||||||||| Sbjct: 1842486 cttccctaagtccggcaccacctggctcaag 1842456
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 ||||| ||||| | ||||| |||||||||||||||||| ||||||||||| || |||||| Sbjct: 295 gacgtggtccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttc 354 Query: 257 gcc 259 ||| Sbjct: 355 gcc 357
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 221 aagtgcggcaccacctggctcaaggccctcgccttcgcc 259 |||||||||||||||||||||||||| |||||||||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 308
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 221 aagtgcggcaccacctggctcaaggccctcgccttcgcc 259 |||||||||||||||||||||||||| |||||||||||| Sbjct: 9822564 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 9822526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 1822162 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 1822111 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaagg 245 ||||||||||| ||||||||| |||||||||| Sbjct: 1830734 cttccccaagtccggcaccacttggctcaagg 1830703 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaag 244 |||||| |||| ||||||||||||||||||| Sbjct: 1842464 cttccctaagtccggcaccacctggctcaag 1842434
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 221 aagtgcggcaccacctggctcaaggccctcgccttcgcc 259 |||||||||||||||||||||||||| |||||||||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 109829
>ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| |||||||||||||||||||||||||| ||| ||||||||| Sbjct: 209 tcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgcca 265
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| |||||||||||||||||||||||||| ||| ||||||||| Sbjct: 25557991 tcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgcca 25557935 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcg 257 |||||| || || ||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 25560359 tcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcg 25560306 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 25528307 tcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttcgcca 25528251 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 278 cacccgccgggcggcctcgaccacccgctccgccgccgcaacccccacgac 328 |||||||||| ||| |||||||||||||||||||| |||||| |||||| Sbjct: 8458960 cacccgccggcgagccccgaccacccgctccgccgcctcaacccgcacgac 8459010 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||||| |||||| Sbjct: 8468887 cgaccacccgctccgccgcctcaacccgcacgac 8468854 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 8468988 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttc 8468929 Query: 257 gccac 261 ||||| Sbjct: 8468928 gccac 8468924 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 230 accacctggctcaaggccctcgccttcgccac 261 ||||| ||||||||||||||||| |||||||| Sbjct: 10720099 accacgtggctcaaggccctcgcgttcgccac 10720068 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaaccc 321 |||||||||||||||||||| |||||| Sbjct: 12060036 cgaccacccgctccgccgcctcaaccc 12060062 Score = 46.1 bits (23), Expect = 0.098 Identities = 53/63 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 8458879 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttc 8458938 Query: 257 gcc 259 ||| Sbjct: 8458939 gcc 8458941 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||| | |||||| Sbjct: 10720034 cgaccacccgctccgccgcctcaactcgcacgac 10720001
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| |||||||||||||||||||||||||| ||| ||||||||| Sbjct: 44682 tcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgcca 44626 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcg 257 |||||| || || ||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 47050 tcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcg 46997 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 14998 tcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttcgcca 14942
>ref|NM_183698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 234 cttccccaagtgtggcaccacctggctcaaggc 266
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 247 cttccccaagtgtggcaccacctggctcaaggc 279
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 11687227 cttccccaagtgtggcaccacctggctcaaggc 11687195
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 126351 cttccccaagtgtggcaccacctggctcaaggc 126319
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 26395 cttccccaagtgtggcaccacctggctcaaggc 26363
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgcca 260 |||||| || || ||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 159623 tcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttcgcca 159567
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||||||||| |||||||||||||||||||| Sbjct: 306 cttccccaagtgtggcaccacctggctcaaggc 338
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 24548 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 24497 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||| |||| ||||||||||||||| ||||| Sbjct: 46169 cttccctaagtccggcaccacctggcttaaggc 46137 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 ||||||||||| | ||||||| ||||||||||| Sbjct: 26682 cttccccaagtccagcaccacttggctcaaggc 26650 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaa 243 |||||| || ||||||||||| ||||||||| ||| |||| Sbjct: 42763 tcctcgtcaccttccccaagtccggcaccacttggatcaa 42724
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 110722 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 110671 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 |||||| |||| ||||||||||||||| ||||| Sbjct: 132343 cttccctaagtccggcaccacctggcttaaggc 132311 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaaggc 246 ||||||||||| | ||||||| ||||||||||| Sbjct: 112856 cttccccaagtccagcaccacttggctcaaggc 112824 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 204 tcctcggcagcttccccaagtgcggcaccacctggctcaa 243 |||||| || ||||||||||| ||||||||| ||| |||| Sbjct: 128937 tcctcgtcaccttccccaagtccggcaccacttggatcaa 128898
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 16902 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 16851 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaagg 245 ||||||||||| ||||||||| |||||||||| Sbjct: 25474 cttccccaagtccggcaccacttggctcaagg 25443 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 214 cttccccaagtgcggcaccacctggctcaag 244 |||||| |||| ||||||||||||||||||| Sbjct: 37204 cttccctaagtccggcaccacctggctcaag 37174
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 195 cggacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggc 246 |||||||| || ||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 18298 cggacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggc 18349 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 214 cttccccaagtgcggcaccacctggctcaagg 245 ||||||||||| ||||||||| |||||||||| Sbjct: 9726 cttccccaagtccggcaccacttggctcaagg 9757
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 278 cacccgccgggcggcctcgaccacccgctccgccgccgcaacccccacgac 328 |||||||||| ||| |||||||||||||||||||| |||||| |||||| Sbjct: 391 cacccgccggcgagccccgaccacccgctccgccgcctcaacccgcacgac 441 Score = 46.1 bits (23), Expect = 0.098 Identities = 53/63 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 310 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttc 369 Query: 257 gcc 259 ||| Sbjct: 370 gcc 372
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 211 cagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 |||| ||||||||||||||||||| ||||||| |||||| | |||||||| Sbjct: 7945095 cagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccac 7945145
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 278 cacccgccgggcggcctcgaccacccgctccgccgccgcaacccccacgac 328 |||||||||| ||| |||||||||||||||||||| |||||| |||||| Sbjct: 74677 cacccgccggcgagccccgaccacccgctccgccgcctcaacccgcacgac 74727 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||||| |||||| Sbjct: 84604 cgaccacccgctccgccgcctcaacccgcacgac 84571 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 84705 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttc 84646 Query: 257 gccac 261 ||||| Sbjct: 84645 gccac 84641 Score = 46.1 bits (23), Expect = 0.098 Identities = 53/63 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 74596 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttc 74655 Query: 257 gcc 259 ||| Sbjct: 74656 gcc 74658
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 211 cagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 |||| ||||||||||||||||||| ||||||| |||||| | |||||||| Sbjct: 52613 cagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccac 52663
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 211 cagcttccccaagtgcggcaccacctggctcaaggccctcgccttcgccac 261 |||| ||||||||||||||||||| ||||||| |||||| | |||||||| Sbjct: 296 cagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccac 346
>ref|XM_480894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||||| |||||| Sbjct: 363 cgaccacccgctccgccgcctcaacccgcacgac 396 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 262 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttc 321 Query: 257 gccac 261 ||||| Sbjct: 322 gccac 326
>dbj|AK099021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F24, full insert sequence Length = 1209 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||||| |||||| Sbjct: 362 cgaccacccgctccgccgcctcaacccgcacgac 395 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 261 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttc 320 Query: 257 gccac 261 ||||| Sbjct: 321 gccac 325
>dbj|AK061204.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B05, full insert sequence Length = 1234 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||||| |||||| Sbjct: 360 cgaccacccgctccgccgcctcaacccgcacgac 393 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| |||| ||||||||| || || || ||||||||||| ||||| ||| Sbjct: 259 gacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttc 318 Query: 257 gccac 261 ||||| Sbjct: 319 gccac 323
>ref|XM_481221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 accacctggctcaaggccctcgccttcgccac 261 ||||| ||||||||||||||||| |||||||| Sbjct: 304 accacgtggctcaaggccctcgcgttcgccac 335 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||| | |||||| Sbjct: 369 cgaccacccgctccgccgcctcaactcgcacgac 402
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0027D12 map near 50283S, complete sequence Length = 128988 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 212 agcttccccaagtgcggcaccacctggctcaaggccctcgcctt 255 ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 36557 agctttcctaagtgtggtaccacctggctcaaagccctcgcctt 36514
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 230 accacctggctcaaggccctcgccttcgccac 261 ||||| ||||||||||||||||| |||||||| Sbjct: 17231 accacgtggctcaaggccctcgcgttcgccac 17200 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 295 cgaccacccgctccgccgccgcaacccccacgac 328 |||||||||||||||||||| |||| | |||||| Sbjct: 17166 cgaccacccgctccgccgcctcaactcgcacgac 17133
>dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G02, full insert sequence Length = 1103 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 212 agcttccccaagtgcggcaccacctggctcaaggccctcgcctt 255 ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 170 agctttcctaagtgtggtaccacctggctcaaagccctcgcctt 213
>ref|XM_481385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaaccc 321 |||||||||||||||||||| |||||| Sbjct: 345 cgaccacccgctccgccgcctcaaccc 371
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaaccc 321 |||||||||||||||||||| |||||| Sbjct: 111531 cgaccacccgctccgccgcctcaaccc 111557
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaaccc 321 |||||||||||||||||||| |||||| Sbjct: 57170 cgaccacccgctccgccgcctcaaccc 57196
>dbj|AK058698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C01, full insert sequence Length = 1315 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 cgaccacccgctccgccgccgcaaccc 321 |||||||||||||||||||| |||||| Sbjct: 410 cgaccacccgctccgccgcctcaaccc 436
>ref|XM_516826.1| PREDICTED: Pan troglodytes similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 36 (LOC460791), mRNA Length = 1564 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 199 gcctcgaccaccccctccgccgccgc 174
>gb|AF217190.1| Homo sapiens MLEL1 protein (MLEL1) mRNA, complete cds Length = 3600 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 217 gcctcgaccaccccctccgccgccgc 192
>gb|AC134026.2| Homo sapiens 3 BAC RP11-316N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 56614 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 44237 gcctcgaccaccccctccgccgccgc 44262
>gb|BC036035.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 36, mRNA (cDNA clone MGC:33187 IMAGE:5273384), complete cds Length = 3502 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 189 gcctcgaccaccccctccgccgccgc 164
>emb|AJ577133.1|HSA577133 Homo sapiens mRNA for putative DExH/D RNA helicase (RHAU gene), nuclear isoform Length = 3027 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 144 gcctcgaccaccccctccgccgccgc 119
>emb|AJ577134.1|HSA577134 Homo sapiens mRNA for putative DExH/D RNA helicase (RHAU gene), cytoplasmic isoform Length = 2985 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 144 gcctcgaccaccccctccgccgccgc 119
>ref|NM_020865.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 36 (DHX36), mRNA Length = 3600 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 gcctcgaccacccgctccgccgccgc 316 ||||||||||||| |||||||||||| Sbjct: 217 gcctcgaccaccccctccgccgccgc 192
>ref|XM_316311.2| Anopheles gambiae str. PEST ENSANGP00000020538 (ENSANGG00000018049), partial mRNA Length = 2031 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ttctggctgctggagaagttc 148 ||||||||||||||||||||| Sbjct: 1537 ttctggctgctggagaagttc 1557
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tggagaagttcttggagggc 157 |||||||||||||||||||| Sbjct: 46518 tggagaagttcttggagggc 46537
>ref|NM_114377.1| Arabidopsis thaliana sulfotransferase AT3G45080 mRNA, complete cds Length = 990 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 214 ttccctaaatgcggcaccacttggctcaaggc 245
>ref|NM_114376.2| Arabidopsis thaliana sulfotransferase AT3G45070 mRNA, complete cds Length = 1067 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 199 ttccctaaatgcggcaccacttggctcaaggc 230
>ref|XM_468248.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4176 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 ccacccgctccgccgccgcaacccccac 325 |||||| |||||||||||| |||||||| Sbjct: 2185 ccaccccctccgccgccgccacccccac 2212
>ref|NM_195283.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0040E17.29), mRNA Length = 1764 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgggccacgcgctggcggcg 385 |||||||||||||||||||| Sbjct: 602 tgggccacgcgctggcggcg 621
>gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility locus class III regions Hsc70t gene, partial cds; smRNP, G7A, NG23, MutS homolog, CLCP, NG24, NG25, and NG26 genes, complete cds; and unknown genes Length = 135545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccgacatcacctcgcttcca 82 |||||||||||||||||||| Sbjct: 129426 ccgacatcacctcgcttcca 129445
>gb|BT015730.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 990 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 214 ttccctaaatgcggcaccacttggctcaaggc 245
>gb|BT014993.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 1053 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 222 ttccctaaatgcggcaccacttggctcaaggc 253
>gb|AY659030.1| Synthetic construct Peudomonas aeruginosa clone FLH035688.01F PA5382 gene, partial cds Length = 894 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ctggagctgcagttcgcggtttcc 364 ||||||| |||||||||||||||| Sbjct: 238 ctggagcagcagttcgcggtttcc 261
>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence Length = 64153 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 accacccgctccgccgccgc 316 |||||||||||||||||||| Sbjct: 5817 accacccgctccgccgccgc 5798
>gb|BT011733.1| Arabidopsis thaliana At3g45070 gene, complete cds Length = 972 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 199 ttccctaaatgcggcaccacttggctcaaggc 230
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gggccacgcgctggcggcgc 386 |||||||||||||||||||| Sbjct: 2217872 gggccacgcgctggcggcgc 2217891
>ref|NM_001030759.1| Gallus gallus similar to Putative MAP kinase activating protein C22orf5 (LOC418027), mRNA Length = 3566 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aacccccacgacatcgtcca 336 |||||||||||||||||||| Sbjct: 1229 aacccccacgacatcgtcca 1248
>emb|AL353992.1|ATF14D17 Arabidopsis thaliana DNA chromosome 3, BAC clone F14D17 Length = 89214 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 81207 ttccctaaatgcggcaccacttggctcaaggc 81176 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 78866 ttccctaaatgcggcaccacttggctcaaggc 78835
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 4259 ttccctaaatgcggcaccacttggctcaaggc 4228 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 215 ttccccaagtgcggcaccacctggctcaaggc 246 ||||| || ||||||||||| ||||||||||| Sbjct: 1918 ttccctaaatgcggcaccacttggctcaaggc 1887
>emb|AJ851700.1| Gallus gallus mRNA for hypothetical protein, clone 19d11 Length = 3566 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aacccccacgacatcgtcca 336 |||||||||||||||||||| Sbjct: 1229 aacccccacgacatcgtcca 1248
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tgggccacgcgctggcggcg 385 |||||||||||||||||||| Sbjct: 127738 tgggccacgcgctggcggcg 127719
>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete Sequence, complete sequence Length = 221899 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccgacatcacctcgcttcca 82 |||||||||||||||||||| Sbjct: 215288 ccgacatcacctcgcttcca 215307
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ggccacgcgctggcggcgct 387 |||||||||||||||||||| Sbjct: 2918770 ggccacgcgctggcggcgct 2918751
>gb|AE005762.1| Caulobacter crescentus CB15 section 88 of 359 of the complete genome Length = 5616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cccgccgggcggcctcgacc 299 |||||||||||||||||||| Sbjct: 3456 cccgccgggcggcctcgacc 3437
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 tcgaccacccgctccgccgccgca 317 |||||||||||| ||||||||||| Sbjct: 3206225 tcgaccacccgcgccgccgccgca 3206202
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gcgcaaccgcgccgaccacc 281 |||||||||||||||||||| Sbjct: 1555580 gcgcaaccgcgccgaccacc 1555599
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 ccacccgctccgccgccgcaacccccac 325 |||||| |||||||||||| |||||||| Sbjct: 33810265 ccaccccctccgccgccgccacccccac 33810238 Score = 40.1 bits (20), Expect = 6.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| || | | ||||||| |||| | || ||||||||||| ||||||||| Sbjct: 27987091 gacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 27987032
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cacccgctccgccgccgcaa 318 |||||||||||||||||||| Sbjct: 135240 cacccgctccgccgccgcaa 135221
>gb|AE004951.1| Pseudomonas aeruginosa PAO1, section 512 of 529 of the complete genome Length = 11555 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ctggagctgcagttcgcggtttcc 364 ||||||| |||||||||||||||| Sbjct: 757 ctggagcagcagttcgcggtttcc 734
>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence Length = 144092 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gacatcacctcgcttccatt 84 |||||||||||||||||||| Sbjct: 107999 gacatcacctcgcttccatt 107980
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 acccgccgggcggcctcgac 298 |||||||||||||||||||| Sbjct: 3322032 acccgccgggcggcctcgac 3322051
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 40.1 bits (20), Expect = 6.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| || | | ||||||| |||| | || ||||||||||| ||||||||| Sbjct: 30753 gacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 40.1 bits (20), Expect = 6.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 197 gacgtcgtcctcggcagcttccccaagtgcggcaccacctggctcaaggccctcgccttc 256 |||||| |||||| || | | ||||||| |||| | || ||||||||||| ||||||||| Sbjct: 114543 gacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 114484
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 ccacccgctccgccgccgcaacccccac 325 |||||| |||||||||||| |||||||| Sbjct: 26843 ccaccccctccgccgccgccacccccac 26816
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 catcgtccactacctggagc 347 |||||||||||||||||||| Sbjct: 383514 catcgtccactacctggagc 383533
>emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chromosome 17, complete sequence Length = 190041 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccgacatcacctcgcttcca 82 |||||||||||||||||||| Sbjct: 42666 ccgacatcacctcgcttcca 42685
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgggcggcctcgaccacccgctcc 308 |||||||||||||||||| ||||| Sbjct: 3406099 cgggcggcctcgaccacctgctcc 3406122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,950,494 Number of Sequences: 3902068 Number of extensions: 2950494 Number of successful extensions: 64573 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62268 Number of HSP's gapped (non-prelim): 2305 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
