ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF469491.1| Triticum aestivum RUB1-conjugating enzyme mRNA, p... 525 e-146
2dbj|AK073821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3ref|XM_482060.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
4ref|XM_507579.1| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
5ref|XM_507208.2| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
6dbj|AK104511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
7dbj|AK104158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
8dbj|AK070541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
10dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
12dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
13gb|AY157723.1| Olea europaea RUB1 conjugating enzyme (ORCE) mRNA... 72 2e-09
14gb|AY591341.1| Zea mays putative RUB1 conjugating enzyme mRNA, c... 50 0.007
15gb|AY104531.1| Zea mays PCO100562 mRNA sequence 50 0.007
16gb|DQ200379.1| Solanum tuberosum clone 061E06 RUB1-conjugating e... 48 0.027
17ref|XM_865508.1| PREDICTED: Bos taurus similar to glycerol-3-pho... 48 0.027
18gb|BT012995.1| Lycopersicon esculentum clone 114216F, mRNA sequence 48 0.027
19gb|AY004247.1| Lycopersicon esculentum RUB1 conjugating enzyme (... 48 0.027
20gb|DQ241836.1| Solanum tuberosum clone 180F08 RUB1 conjugating e... 48 0.027
21ref|XM_481753.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
22dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
23dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
24dbj|AK109191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
25gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 44 0.42
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
27emb|BX682529.6| Zebrafish DNA sequence from clone CH211-194P13 i... 44 0.42
28gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 44 0.42
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
30emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial se... 44 0.42
31emb|AJ578520.1|EGU578520 Elaeis guineensis microsatellite DNA, c... 42 1.7
32emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 42 1.7
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-4... 42 1.7
35gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.6
36gb|AC154400.2| Mus musculus BAC clone RP23-163P4 from chromosome... 40 6.6
37gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-... 40 6.6
38ref|XM_609276.2| PREDICTED: Bos taurus similar to CG3493-PA (LOC... 40 6.6
39gb|DQ192664.1| Zea mays clone sad-By804 putative stearoyl-acyl-c... 40 6.6
40gb|DQ192663.1| Zea mays clone sad-B73 putative stearoyl-acyl-car... 40 6.6
41emb|CT009702.5| Mouse DNA sequence from clone RP23-140A15 on chr... 40 6.6
42gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome... 40 6.6
43emb|CR956379.5| Pig DNA sequence from clone CH242-196P11 on chro... 40 6.6
44gb|AC117680.7| Mus musculus chromosome 1, clone RP23-435M2, comp... 40 6.6
45gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08,... 40 6.6
46emb|AL389916.15| Human DNA sequence from clone RP11-470J18 on ch... 40 6.6
47emb|AL049612.11|HSJ182D15 Human DNA sequence from clone RP1-182D... 40 6.6
48gb|AF475116.1| Triticum aestivum ribosomal protein L30 mRNA, par... 40 6.6
49gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence 40 6.6
50emb|AL772227.5| Mouse DNA sequence from clone RP23-1O16 on chrom... 40 6.6
51gb|AC091826.3| Homo sapiens chromosome 5 clone CTC-498M16, compl... 40 6.6
52gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell... 40 6.6
53gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequ... 40 6.6
54gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequ... 40 6.6
55gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswel... 40 6.6
56gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, co... 40 6.6
57gb|AC087315.21| Homo sapiens 12p BAC RP11-626A3 (Roswell Park Ca... 40 6.6
58gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome... 40 6.6
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
60dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
61gb|AE004599.1| Pseudomonas aeruginosa PAO1, section 160 of 529 o... 40 6.6
62gb|AC079210.12| Homo sapiens chromosome 17, clone RP11-120M18, c... 40 6.6
63dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
64dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
65gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, compl... 40 6.6
66gb|AY104235.1| Zea mays PCO105183 mRNA sequence 40 6.6
67gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 ... 40 6.6
68gb|AC005799.1|AC005799 Homo sapiens chromosome 17, clone hRPK.62... 40 6.6
69gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, comple... 40 6.6
70emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chr... 40 6.6 
>gb|AF469491.1| Triticum aestivum RUB1-conjugating enzyme mRNA, partial cds
          Length = 783

 Score =  525 bits (265), Expect = e-146
 Identities = 320/333 (96%), Gaps = 4/333 (1%)
 Strand = Plus / Plus

                                                                       
Query: 157 gggccgctgaaagatgataaacctttttaagatcaaggggcagaagaaggaagaggcagc 216
           ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 120 gggccgccggaagatgataaacctttttaagatcaaggggcagaagaaggaagaggcggc 179

                                                                       
Query: 217 caactcaaatggggggcctcctgttaagaagcaaagtccaggggaattacgtctccataa 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caactcaaatggggggcctcctgttaagaagcaaagtccaggggaattacgtctccataa 239

                                                                       
Query: 277 agatattgctgagcttaaccttccaaagacaactaaaatttccttcccaaatggaaagga 336
           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 agatattgctgagcttaacctaccaaagacaactaaaatttccttcccaaacggaaagga 299

                                                                       
Query: 337 tgatctcatgaactttgaagctactctacggcctgacgaaggatactatctaggtgggtc 396
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 300 tgatctcatgaactttgaagctactctacgacctgacgaaggatactatctaggtgggtc 359

                                                                       
Query: 397 attcactttcaccttccaagtatctccttcctaccctcacgaggctcc-aaggtcaagtg 455
           ||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct: 360 attcactttcaccttccaagtttctccttcctaccctcatgaggcaccgaaggtcaagtg 419

                                            
Query: 456 c-agactaagg-ttaccatccc-atattgacct 485
           | ||||||||| |||||||||| ||||||||||
Sbjct: 420 caagactaaggtttaccatcccaatattgacct 452



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 46 ggttcgcgcctccccgccggtcgccgcccgcc 77
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggttcgcgcctccccgccggtcgccgcccgcc 32
to top
>dbj|AK073821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069E18, full
           insert sequence
          Length = 898

 Score =  218 bits (110), Expect = 1e-53
 Identities = 250/294 (85%), Gaps = 2/294 (0%)
 Strand = Plus / Plus

                                                                       
Query: 176 aacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggcct 235
           ||||| |||||||| ||||| ||||||||||||||||| || ||  |||||||| | |||
Sbjct: 147 aacctctttaagataaagggacagaagaaggaagaggcggcaaatacaaatgggagacct 206

                                                                       
Query: 236 cctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagcttaac 295
           |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 207 cctgctaagaagcaaagtccaggagaattacgtctccataaagacattgctgagcttaat 266

                                                                       
Query: 296 cttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttgaa 355
           |||||||||| ||| || ||| | || || ||||||||||||||||| |||||| |||| 
Sbjct: 267 cttccaaagaaaaccaacattacttttcctaatggaaaggatgatctgatgaacattgag 326

                                                                       
Query: 356 gctactctacggcctgacgaaggatactatctaggtgggtcattcactttcaccttccaa 415
             |||||| ||||||||||||||||||||| | |||||  | ||   |||||| || |||
Sbjct: 327 attactcttcggcctgacgaaggatactatgtgggtggagcttttgttttcactttacaa 386

                                                                 
Query: 416 gtatctccttcctaccctcacgaggc-tccaaggtcaagtgca-gactaaggtt 467
           ||  ||||| | |||||||||||| |  ||||||||||||||| ||||||||||
Sbjct: 387 gttcctcctacttaccctcacgagccgcccaaggtcaagtgcacgactaaggtt 440
to top
>ref|XM_482060.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1033

 Score =  159 bits (80), Expect = 1e-35
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 113 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 172

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 173 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcacaaagatattgctgaactta 232

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           ||||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 233 accttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 292

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 293 aagttactattcgacctgatgagggatactatgtaggtgg 332
to top
>ref|XM_507579.1| PREDICTED Oryza sativa (japonica cultivar-group), P0690C12.28 mRNA
          Length = 1130

 Score =  159 bits (80), Expect = 1e-35
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 128 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 187

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 188 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcacaaagatattgctgaactta 247

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           ||||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 248 accttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 307

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 308 aagttactattcgacctgatgagggatactatgtaggtgg 347
to top
>ref|XM_507208.2| PREDICTED Oryza sativa (japonica cultivar-group), P0690C12.28 mRNA
          Length = 1195

 Score =  159 bits (80), Expect = 1e-35
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 155 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 214

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 215 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcacaaagatattgctgaactta 274

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           ||||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 275 accttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 334

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 335 aagttactattcgacctgatgagggatactatgtaggtgg 374
to top
>dbj|AK104511.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H10, full
           insert sequence
          Length = 1130

 Score =  159 bits (80), Expect = 1e-35
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 128 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 187

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 188 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcacaaagatattgctgaactta 247

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           ||||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 248 accttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 307

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 308 aagttactattcgacctgatgagggatactatttaggtgg 347
to top
>dbj|AK104158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H05, full
           insert sequence
          Length = 1033

 Score =  159 bits (80), Expect = 1e-35
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 113 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 172

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| ||| ||||||||||||| ||||
Sbjct: 173 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcattaagatattgctgaactta 232

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           ||||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 233 accttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 292

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 293 aagttactattcgacctgatgagggatactatgtaggtgg 332
to top
>dbj|AK070541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056A05, full
           insert sequence
          Length = 1195

 Score =  151 bits (76), Expect = 3e-33
 Identities = 184/220 (83%)
 Strand = Plus / Plus

                                                                       
Query: 174 taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
           |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 155 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 214

                                                                       
Query: 234 ctcctgttaagaagcaaagtccaggggaattacgtctccataaagatattgctgagctta 293
           ||||||  || ||||||||||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 215 ctcctgccaaaaagcaaagtccaggggagttgcgtcttcacaaagatattgctgaactta 274

                                                                       
Query: 294 accttccaaagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttg 353
           | ||||| ||| | |||| |||||| || || ||||| ||||||||| | ||||||||||
Sbjct: 275 aacttcctaagtcgactagaatttcttttcctaatggcaaggatgatttgatgaactttg 334

                                                   
Query: 354 aagctactctacggcctgacgaaggatactatctaggtgg 393
           ||| |||| | || ||||| || ||||||||| |||||||
Sbjct: 335 aagttactattcgacctgatgagggatactatgtaggtgg 374
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  119 bits (60), Expect = 9e-24
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                           
Query: 167     aagatgataaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaat 226
               |||||| | ||||| |||||||| ||||| ||||||||||||||||| || ||  |||||
Sbjct: 9306859 aagatgttgaacctctttaagataaagggacagaagaaggaagaggcggcaaatacaaat 9306918

                                                                   
Query: 227     ggggggcctcctgttaagaagcaaagtccaggggaattacgtctccataaag 278
               ||| | ||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 9306919 gggagacctcctgctaagaagcaaagtccaggagaattacgtctccataaag 9306970



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                           
Query: 281     attgctgagcttaaccttccaaagacaactaaaatttccttcccaaatggaaaggatgat 340
               |||||||||||||| |||||||||| ||| || ||| | || || |||||||||||||||
Sbjct: 9307836 attgctgagcttaatcttccaaagaaaaccaacattacttttcctaatggaaaggatgat 9307895

                                                            
Query: 341     ctcatgaactttgaagctactctacggcctgacgaaggatactat 385
               || |||||| ||||   |||||| |||||||||||||||||||||
Sbjct: 9307896 ctgatgaacattgagattactcttcggcctgacgaaggatactat 9307940
to top
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1742_G01
          Length = 154912

 Score =  119 bits (60), Expect = 9e-24
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                          
Query: 167    aagatgataaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaat 226
              |||||| | ||||| |||||||| ||||| ||||||||||||||||| || ||  |||||
Sbjct: 132150 aagatgttgaacctctttaagataaagggacagaagaaggaagaggcggcaaatacaaat 132209

                                                                  
Query: 227    ggggggcctcctgttaagaagcaaagtccaggggaattacgtctccataaag 278
              ||| | ||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 132210 gggagacctcctgctaagaagcaaagtccaggagaattacgtctccataaag 132261



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                          
Query: 281    attgctgagcttaaccttccaaagacaactaaaatttccttcccaaatggaaaggatgat 340
              |||||||||||||| |||||||||| ||| || ||| | || || |||||||||||||||
Sbjct: 133127 attgctgagcttaatcttccaaagaaaaccaacattacttttcctaatggaaaggatgat 133186

                                                           
Query: 341    ctcatgaactttgaagctactctacggcctgacgaaggatactat 385
              || |||||| ||||   |||||| |||||||||||||||||||||
Sbjct: 133187 ctgatgaacattgagattactcttcggcctgacgaaggatactat 133231
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                            
Query: 277      agatattgctgagcttaaccttccaaagacaactaaaatttccttcccaaatggaaagga 336
                |||||||||||| ||||||||||| ||| | |||| |||||| || || ||||| |||||
Sbjct: 17507656 agatattgctgaacttaaccttcctaagtcgactagaatttcttttcctaatggcaagga 17507597

                                                                 
Query: 337      tgatctcatgaactttgaagctactctacggcctgacgaaggatactat 385
                |||| | ||||||||||||| |||| | || ||||| || |||||||||
Sbjct: 17507596 tgatttgatgaactttgaagttactattcgacctgatgagggatactat 17507548



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                            
Query: 174      taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
                |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 17507961 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 17507902

                                                     
Query: 234      ctcctgttaagaagcaaagtccaggggaattacgtct 270
                ||||||  || ||||||||||||||||| || |||||
Sbjct: 17507901 ctcctgccaaaaagcaaagtccaggggagttgcgtct 17507865



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 52       cgcctccccgccggtcgccgcccgccg 78
                |||||| ||||||||||||||||||||
Sbjct: 15220084 cgcctcgccgccggtcgccgcccgccg 15220110
to top
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0690C12
          Length = 139693

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                          
Query: 277    agatattgctgagcttaaccttccaaagacaactaaaatttccttcccaaatggaaagga 336
              |||||||||||| ||||||||||| ||| | |||| |||||| || || ||||| |||||
Sbjct: 118501 agatattgctgaacttaaccttcctaagtcgactagaatttcttttcctaatggcaagga 118442

                                                               
Query: 337    tgatctcatgaactttgaagctactctacggcctgacgaaggatactat 385
              |||| | ||||||||||||| |||| | || ||||| || |||||||||
Sbjct: 118441 tgatttgatgaactttgaagttactattcgacctgatgagggatactat 118393



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                          
Query: 174    taaacctttttaagatcaaggggcagaagaaggaagaggcagccaactcaaatggggggc 233
              |||||||| ||||||| ||||| || ||||||||||| ||||||||  |||||||   ||
Sbjct: 118806 taaaccttattaagataaagggtcaaaagaaggaagatgcagccaatgcaaatggaaagc 118747

                                                   
Query: 234    ctcctgttaagaagcaaagtccaggggaattacgtct 270
              ||||||  || ||||||||||||||||| || |||||
Sbjct: 118746 ctcctgccaaaaagcaaagtccaggggagttgcgtct 118710
to top
>gb|AY157723.1| Olea europaea RUB1 conjugating enzyme (ORCE) mRNA, complete cds
          Length = 906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 atttccttcccaaatggaaaggatgatctcatgaactttgaagctactctacggcctgac 373
           ||||| ||||| |||||||| |||||||| ||||||||||||| |||  | |||||||| 
Sbjct: 253 atttcattccctaatggaaaagatgatcttatgaactttgaagttaccattcggcctgat 312

                               
Query: 374 gaaggatactatctaggtgg 393
           |||||||| || ||||||||
Sbjct: 313 gaaggatattacctaggtgg 332
to top
>gb|AY591341.1| Zea mays putative RUB1 conjugating enzyme mRNA, complete cds
          Length = 996

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 266 cgtctccataaagatattgctgagcttaaccttccaaagacaactaaaatttccttccca 325
           ||||| ||||||||||||  |||||| ||||| || ||||| ||   |||||| || || 
Sbjct: 292 cgtctgcataaagatattagtgagctcaacctgccgaagaccacatcaatttcttttccc 351

                                        
Query: 326 aatggaaaggatgatctcatgaactttga 354
           ||||| ||||||||||| ||||| |||||
Sbjct: 352 aatggcaaggatgatctgatgaattttga 380
to top
>gb|AY104531.1| Zea mays PCO100562 mRNA sequence
          Length = 985

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 266 cgtctccataaagatattgctgagcttaaccttccaaagacaactaaaatttccttccca 325
           ||||| ||||||||||||  |||||| ||||| || ||||| ||   |||||| || || 
Sbjct: 292 cgtcttcataaagatattagtgagctcaacctgccgaagaccacatcaatttcttttccc 351

                                        
Query: 326 aatggaaaggatgatctcatgaactttga 354
           ||||| ||||||||||| ||||| |||||
Sbjct: 352 aatggcaaggatgatctgatgaattttga 380
to top
>gb|DQ200379.1| Solanum tuberosum clone 061E06 RUB1-conjugating enzyme-like protein
           mRNA, complete cds
          Length = 913

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 111/140 (79%)
 Strand = Plus / Plus

                                                                       
Query: 242 aagaagcaaagtccaggggaattacgtctccataaagatattgctgagcttaaccttcca 301
           ||||| ||||||||||| || || ||||| |||||||||||   |||||| || || || 
Sbjct: 188 aagaaacaaagtccaggagagttgcgtcttcataaagatataagtgagctaaatctaccc 247

                                                                       
Query: 302 aagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttgaagctact 361
           || |||  ||  || || || || |||||||| ||||| ||||||||||||||||  || 
Sbjct: 248 aaaacatgtagcatatcatttcccaatggaaaagatgacctcatgaactttgaagtcacc 307

                               
Query: 362 ctacggcctgacgaaggata 381
            | |||||||| ||||||||
Sbjct: 308 attcggcctgatgaaggata 327
to top
>ref|XM_865508.1| PREDICTED: Bos taurus similar to glycerol-3-phosphate dehydrogenase
           1-like (LOC614138), mRNA
          Length = 1167

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 396 cattcactttcaccttccaagtat 419
           ||||||||||||||||||||||||
Sbjct: 31  cattcactttcaccttccaagtat 8
to top
>gb|BT012995.1| Lycopersicon esculentum clone 114216F, mRNA sequence
          Length = 861

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 326 aatggaaaggatgatctcatgaactttgaagctactctacggcctgacgaaggata 381
           |||||||| ||||| ||||||||||||||||  ||  | |||||||| ||||||||
Sbjct: 295 aatggaaaagatgacctcatgaactttgaagtcaccattcggcctgatgaaggata 350
to top
>gb|AY004247.1| Lycopersicon esculentum RUB1 conjugating enzyme (RCE1) mRNA,
           partial cds
          Length = 594

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 326 aatggaaaggatgatctcatgaactttgaagctactctacggcctgacgaaggata 381
           |||||||| ||||| ||||||||||||||||  ||  | |||||||| ||||||||
Sbjct: 70  aatggaaaagatgacctcatgaactttgaagtcaccattcggcctgatgaaggata 125
to top
>gb|DQ241836.1| Solanum tuberosum clone 180F08 RUB1 conjugating enzyme-like mRNA,
           complete cds
          Length = 868

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 111/140 (79%)
 Strand = Plus / Plus

                                                                       
Query: 242 aagaagcaaagtccaggggaattacgtctccataaagatattgctgagcttaaccttcca 301
           ||||| ||||||||||| || || ||||| |||||||||||   |||||| || || || 
Sbjct: 193 aagaaacaaagtccaggagagttgcgtcttcataaagatataagtgagctaaatctaccc 252

                                                                       
Query: 302 aagacaactaaaatttccttcccaaatggaaaggatgatctcatgaactttgaagctact 361
           || |||  ||  || || || || |||||||| ||||| ||||||||||||||||  || 
Sbjct: 253 aaaacatgtagcatatcatttcccaatggaaaagatgacctcatgaactttgaagtcacc 312

                               
Query: 362 ctacggcctgacgaaggata 381
            | |||||||| ||||||||
Sbjct: 313 attcggcctgatgaaggata 332
to top
>ref|XM_481753.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 904

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 cgcctccccgccggtcgccgcccgccg 78
          |||||| ||||||||||||||||||||
Sbjct: 18 cgcctcgccgccggtcgccgcccgccg 44
to top
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0062G05
          Length = 152802

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 52   cgcctccccgccggtcgccgcccgccg 78
            |||||| ||||||||||||||||||||
Sbjct: 5715 cgcctcgccgccggtcgccgcccgccg 5741
to top
>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702G08
          Length = 144596

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 52    cgcctccccgccggtcgccgcccgccg 78
             |||||| ||||||||||||||||||||
Sbjct: 67909 cgcctcgccgccggtcgccgcccgccg 67935
to top
>dbj|AK109191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B04,
          full insert sequence
          Length = 904

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 cgcctccccgccggtcgccgcccgccg 78
          |||||| ||||||||||||||||||||
Sbjct: 18 cgcctcgccgccggtcgccgcccgccg 44
to top
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     gcgcctccccgccggtcgccgc 72
              ||||||||||||||||||||||
Sbjct: 145566 gcgcctccccgccggtcgccgc 145545
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 54       cctccccgccggtcgccgcccg 75
                ||||||||||||||||||||||
Sbjct: 15512596 cctccccgccggtcgccgcccg 15512575
to top
>emb|BX682529.6| Zebrafish DNA sequence from clone CH211-194P13 in linkage group 19,
             complete sequence
          Length = 176981

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 307   aactaaaatttccttcccaaat 328
             ||||||||||||||||||||||
Sbjct: 61176 aactaaaatttccttcccaaat 61155
to top
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     gcgcctccccgccggtcgccgc 72
              ||||||||||||||||||||||
Sbjct: 109617 gcgcctccccgccggtcgccgc 109596
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 54       cctccccgccggtcgccgcccg 75
                ||||||||||||||||||||||
Sbjct: 15466878 cctccccgccggtcgccgcccg 15466857
to top
>emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0076H14
            of library OSJNBa from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 53315

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 54   cctccccgccggtcgccgcccg 75
            ||||||||||||||||||||||
Sbjct: 6433 cctccccgccggtcgccgcccg 6412
to top
>emb|AJ578520.1|EGU578520 Elaeis guineensis microsatellite DNA, clone mEgCIR0409
          Length = 887

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 ggcagaagaaggaagaggcag 215
           |||||||||||||||||||||
Sbjct: 151 ggcagaagaaggaagaggcag 171
to top
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    ctccccgccggtcgccgcccg 75
             |||||||||||||||||||||
Sbjct: 19760 ctccccgccggtcgccgcccg 19780
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 55       ctccccgccggtcgccgcccg 75
                |||||||||||||||||||||
Sbjct: 24022781 ctccccgccggtcgccgcccg 24022801
to top
>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197369

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 306    caactaaaatttccttcccaa 326
              |||||||||||||||||||||
Sbjct: 126107 caactaaaatttccttcccaa 126087
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 72      cccgccgaggatcagggccggccg 95
               |||||||||||||||| |||||||
Sbjct: 3292400 cccgccgaggatcaggaccggccg 3292423
to top
>gb|AC154400.2| Mus musculus BAC clone RP23-163P4 from chromosome 16, complete sequence
          Length = 180951

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggatgatctcatgaactttg 353
             ||||||||||||||||||||
Sbjct: 57333 ggatgatctcatgaactttg 57352
to top
>gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-C22301, CT7-374D15,
             proximal part, complete sequence
          Length = 300285

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   ttcactttcaccttccaagt 417
             ||||||||||||||||||||
Sbjct: 40606 ttcactttcaccttccaagt 40625
to top
>ref|XM_609276.2| PREDICTED: Bos taurus similar to CG3493-PA (LOC530799), mRNA
          Length = 3282

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  ctccaaggtcaagtgcagac 460
            ||||||||||||||||||||
Sbjct: 1078 ctccaaggtcaagtgcagac 1059
to top
>gb|DQ192664.1| Zea mays clone sad-By804 putative stearoyl-acyl-carrier protein
           desaturase gene, complete cds
          Length = 4095

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 55  ctccccgccggtcgccgcccgccg 78
           |||||||||| |||||||||||||
Sbjct: 539 ctccccgccgctcgccgcccgccg 562
to top
>gb|DQ192663.1| Zea mays clone sad-B73 putative stearoyl-acyl-carrier protein
           desaturase gene, complete cds
          Length = 4095

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 55  ctccccgccggtcgccgcccgccg 78
           |||||||||| |||||||||||||
Sbjct: 539 ctccccgccgctcgccgcccgccg 562
to top
>emb|CT009702.5| Mouse DNA sequence from clone RP23-140A15 on chromosome 16, complete
             sequence
          Length = 230233

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ggatgatctcatgaactttg 353
             ||||||||||||||||||||
Sbjct: 47396 ggatgatctcatgaactttg 47377
to top
>gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome 12, complete sequence
          Length = 194104

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    ttccttcccaaatggaaagg 335
              ||||||||||||||||||||
Sbjct: 182769 ttccttcccaaatggaaagg 182788
to top
>emb|CR956379.5| Pig DNA sequence from clone CH242-196P11 on chromosome 7, complete
              sequence
          Length = 200057

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    taagaagcaaagtccagggg 260
              ||||||||||||||||||||
Sbjct: 154652 taagaagcaaagtccagggg 154633
to top
>gb|AC117680.7| Mus musculus chromosome 1, clone RP23-435M2, complete sequence
          Length = 202195

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ggatgatctcatgaactttg 353
              ||||||||||||||||||||
Sbjct: 169303 ggatgatctcatgaactttg 169322
to top
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence
          Length = 110038

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tcactttcaccttccaagta 418
             ||||||||||||||||||||
Sbjct: 42907 tcactttcaccttccaagta 42888
to top
>emb|AL389916.15| Human DNA sequence from clone RP11-470J18 on chromosome 10, complete
             sequence
          Length = 68567

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   cagaagaaggaagaggcagc 216
             ||||||||||||||||||||
Sbjct: 65579 cagaagaaggaagaggcagc 65598
to top
>emb|AL049612.11|HSJ182D15 Human DNA sequence from clone RP1-182D15 on chromosome 6q26-27 Contains
             the 3' end of the gene for hypothetical protein FLJ13162
             and a novel gene, complete sequence
          Length = 79576

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   ggggcagaagaaggaagaggcagc 216
             ||||||||||| ||||||||||||
Sbjct: 44937 ggggcagaagagggaagaggcagc 44914
to top
>gb|AF475116.1| Triticum aestivum ribosomal protein L30 mRNA, partial cds
          Length = 228

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 58 cccgccggtcgccgcccgccgagg 81
          ||||||| ||||||||||||||||
Sbjct: 9  cccgccgctcgccgcccgccgagg 32
to top
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence
          Length = 185644

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   gcagaagaaggaagaggcag 215
             ||||||||||||||||||||
Sbjct: 84667 gcagaagaaggaagaggcag 84686
to top
>emb|AL772227.5| Mouse DNA sequence from clone RP23-1O16 on chromosome 11 Contains two
              novel genes, the 5' end of the gene for a novel protein
              similar to human Class V ATPase type 10B (ATP10B)
              (9030605H24Rik) and the 3' end of a novel gene, complete
              sequence
          Length = 178001

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    ccaaagacaactaaaatttc 318
              ||||||||||||||||||||
Sbjct: 153479 ccaaagacaactaaaatttc 153460
to top
>gb|AC091826.3| Homo sapiens chromosome 5 clone CTC-498M16, complete sequence
          Length = 133498

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   gaagaaggaagaggcagcca 218
             ||||||||||||||||||||
Sbjct: 24106 gaagaaggaagaggcagcca 24125
to top
>gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 154234

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    ggggcagaagaaggaagaggcagc 216
              ||||||||||| ||||||||||||
Sbjct: 123775 ggggcagaagagggaagaggcagc 123752
to top
>gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequence
          Length = 38754

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   atcaaggggcagaagaagga 207
             ||||||||||||||||||||
Sbjct: 36086 atcaaggggcagaagaagga 36067
to top
>gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequence
          Length = 40824

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  atcaaggggcagaagaagga 207
            ||||||||||||||||||||
Sbjct: 7394 atcaaggggcagaagaagga 7413
to top
>gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 170466

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 193  ggggcagaagaaggaagaggcagc 216
            ||||||||||| ||||||||||||
Sbjct: 6594 ggggcagaagagggaagaggcagc 6571
to top
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence
          Length = 193681

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    gcagaagaaggaagaggcag 215
              ||||||||||||||||||||
Sbjct: 160198 gcagaagaaggaagaggcag 160217
to top
>gb|AC087315.21| Homo sapiens 12p BAC RP11-626A3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154443

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    gaagaaggaagaggcagcca 218
              ||||||||||||||||||||
Sbjct: 102595 gaagaaggaagaggcagcca 102614
to top
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence
          Length = 202807

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   caaggggcagaagaaggaag 209
             ||||||||||||||||||||
Sbjct: 87290 caaggggcagaagaaggaag 87309
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      ctccccgccggtcgccgccc 74
               ||||||||||||||||||||
Sbjct: 3503035 ctccccgccggtcgccgccc 3503016
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 334      ggatgatctcatgaactttg 353
                ||||||||||||||||||||
Sbjct: 15474678 ggatgatctcatgaactttg 15474697
to top
>gb|AE004599.1| Pseudomonas aeruginosa PAO1, section 160 of 529 of the complete
            genome
          Length = 10134

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   ccgccggtcgccgcccgccg 78
            ||||||||||||||||||||
Sbjct: 2332 ccgccggtcgccgcccgccg 2351
to top
>gb|AC079210.12| Homo sapiens chromosome 17, clone RP11-120M18, complete sequence
          Length = 191681

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   gaagcaaagtccaggggaat 263
             ||||||||||||||||||||
Sbjct: 31334 gaagcaaagtccaggggaat 31353
to top
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0033B09
          Length = 143545

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ctccccgccggtcgccgccc 74
              ||||||||||||||||||||
Sbjct: 119739 ctccccgccggtcgccgccc 119720
to top
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1111C09
          Length = 156393

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggatgatctcatgaactttg 353
             ||||||||||||||||||||
Sbjct: 32187 ggatgatctcatgaactttg 32206
to top
>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence
          Length = 179735

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    ttccttcccaaatggaaagg 335
              ||||||||||||||||||||
Sbjct: 168400 ttccttcccaaatggaaagg 168381
to top
>gb|AY104235.1| Zea mays PCO105183 mRNA sequence
          Length = 1780

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 55  ctccccgccggtcgccgcccgccg 78
           |||||||||| |||||||||||||
Sbjct: 295 ctccccgccgctcgccgcccgccg 318
to top
>gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 of 83 of the complete
             sequence
          Length = 312072

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   ggggcagaagaaggaagaggcagc 216
             ||||||||||| ||||||||||||
Sbjct: 64666 ggggcagaagagggaagaggcagc 64643
to top
>gb|AC005799.1|AC005799 Homo sapiens chromosome 17, clone hRPK.62_F_10, complete sequence
          Length = 154902

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   gaagcaaagtccaggggaat 263
             ||||||||||||||||||||
Sbjct: 76529 gaagcaaagtccaggggaat 76510
to top
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   agaagaaggaagaggcagcc 217
             ||||||||||||||||||||
Sbjct: 79853 agaagaaggaagaggcagcc 79872
to top
>emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chromosome X, complete
              sequence
          Length = 226657

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ttcactttcaccttccaagt 417
              ||||||||||||||||||||
Sbjct: 133653 ttcactttcaccttccaagt 133672


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,559,480
Number of Sequences: 3902068
Number of extensions: 3559480
Number of successful extensions: 73767
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73439
Number of HSP's gapped (non-prelim): 327
length of query: 485
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 463
effective length of database: 17,147,199,772
effective search space: 7939153494436
effective search space used: 7939153494436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top