ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 436 e-119
2dbj|AB045677.1| Oryza sativa (japonica cultivar-group) OsRFC2 mR... 436 e-119
3gb|AY105337.1| Zea mays PCO072101 mRNA sequence 333 3e-88
4ref|NM_102018.2| Arabidopsis thaliana EMB1968; ATP binding / ATP... 159 1e-35
5gb|BT010368.1| Arabidopsis thaliana At1g21690 mRNA, complete cds 159 1e-35
6gb|AY056210.1| Arabidopsis thaliana putative replication factor ... 159 1e-35
7gb|AY062637.1| Arabidopsis thaliana Similar replication factor C... 159 1e-35
8gb|AY084702.1| Arabidopsis thaliana clone 115488 mRNA, complete ... 159 1e-35
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
11emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 149 1e-32
12ref|NM_179364.1| Arabidopsis thaliana EMB1968; ATP binding / ATP... 78 3e-11
13gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete se... 66 1e-07
14gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 se... 66 1e-07
15ref|NM_104994.2| Arabidopsis thaliana ATP binding / ATPase/ DNA ... 48 0.026
16emb|BX813429.1|CNS0ADU1 Arabidopsis thaliana Full-length cDNA Co... 48 0.026
17emb|BX816906.1|CNS0AD5X Arabidopsis thaliana Full-length cDNA Co... 48 0.026
18gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16... 48 0.026
19dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 46 0.10
20gb|AE017221.1| Thermus thermophilus HB27, complete genome 46 0.10
21ref|XM_474873.1| Oryza sativa (japonica cultivar-group), predic... 44 0.41
22gb|CP000081.1| Leishmania major chromosome 35, complete sequence 44 0.41
23ref|XM_838337.1| Leishmania major strain Friedlin replication fa... 44 0.41
24ref|XM_817436.1| Trypanosoma brucei TREU927 hypothetical protein... 44 0.41
25gb|CP000088.1| Thermobifida fusca YX, complete genome 44 0.41
26emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4,... 44 0.41
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
28gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 1.6
29gb|DQ440403.1| Aedes aegypti clone AET-538 replication factor C ... 42 1.6
30gb|AF247499.1| Drosophila melanogaster replication factor C subu... 42 1.6
31gb|AE014075.1| Escherichia coli CFT073, complete genome 42 1.6
32gb|CP000243.1| Escherichia coli UTI89, complete genome 42 1.6
33gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 1.6
34emb|CR938510.1| Single read from an extremity of a full-length c... 42 1.6
35dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 1.6
36gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 1.6
37gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complet... 42 1.6
38gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 1.6
39emb|CR937009.1| uncultured archaeon fos0644c1 42 1.6
40dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 1.6
41gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 1.6
42gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes 42 1.6
43gb|CP000036.1| Shigella boydii Sb227, complete genome 42 1.6
44gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.6
45gb|AC159427.1| Trypanosoma brucei chromosome 8 clone RPCI93-27P2... 40 6.3
46gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 6.3
47gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete... 40 6.3
48gb|AE009952.1| Yersinia pestis KIM, complete genome 40 6.3
49ref|XM_805026.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
50ref|XM_814270.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
51gb|AY069598.1| Drosophila melanogaster LD35209 full insert cDNA 40 6.3
52emb|AL359095.17| Human DNA sequence from clone RP11-70J12 on chr... 40 6.3
53ref|XM_780852.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
54emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 6.3
55emb|AJ414154.1| Yersinia pestis strain CO92 complete genome; seg... 40 6.3
56gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
57gb|AY119188.1| Drosophila melanogaster SD11293 full insert cDNA 40 6.3
58dbj|AB225925.1| Aspergillus oryzae cDNA, contig sequence: AoEST2780 40 6.3
59ref|NM_169093.1| Drosophila melanogaster Xe7 CG2179-RA, transcri... 40 6.3
60dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 6.3
61ref|NM_141315.2| Drosophila melanogaster Xe7 CG2179-RB, transcri... 40 6.3
62ref|NM_135555.2| Drosophila melanogaster RfC3 CG5313-RA (RfC3), ... 40 6.3
63ref|NM_133017.2| Drosophila melanogaster CG8142-RA (CG8142), mRNA 40 6.3
64dbj|AK131773.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.3
65gb|AY058715.1| Drosophila melanogaster LD45348 full length cDNA 40 6.3
66gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.3
67dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
68dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
69gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, r... 40 6.3
70dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
71gb|AY103675.1| Zea mays PCO125717 mRNA sequence 40 6.3
72gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, r... 40 6.3
73gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37... 40 6.3
74gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 ... 40 6.3
75gb|BT001634.1| Drosophila melanogaster RE38701 full insert cDNA 40 6.3
76gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
77emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
78emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on ch... 40 6.3 
>dbj|AK103718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138A02, full
           insert sequence
          Length = 1385

 Score =  436 bits (220), Expect = e-119
 Identities = 297/323 (91%)
 Strand = Plus / Plus

                                                                       
Query: 148 gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaataccggccgaggcaggt 207
           ||||||||||||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 99  gatggcgccgctcgtgccgtcctcgcagccatgggtggagaaataccggccgaggcaggt 158

                                                                       
Query: 208 gaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctcgagaccgc 267
           |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 159 gaaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccaccaccctccagaccgc 218

                                                                       
Query: 268 cgacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgct 327
           |||| | |||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 219 cgaccttccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgct 278

                                                                       
Query: 328 cgccattgcctaccagctctacggcccagagctctacaaggcaagagttttggaacttaa 387
            |||||||| |||||||||||||| ||||||||||||||| |||||||| | ||||||||
Sbjct: 279 tgccattgcttaccagctctacggtccagagctctacaagtcaagagttctagaacttaa 338

                                                                       
Query: 388 tgccagtgatgaacggngaattaatgtggtgaggacaaagatcaaggattttgctgctgt 447
           ||| |||||||| ||  ||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 339 tgctagtgatgatcgtggaattaatgtggtgaggactaagatcaaggactttgctgctgt 398

                                  
Query: 448 ggctgttggttctgcacggaaag 470
            ||||||||||||||||| ||||
Sbjct: 399 tgctgttggttctgcacgaaaag 421
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>dbj|AB045677.1| Oryza sativa (japonica cultivar-group) OsRFC2 mRNA for replication
           factor C 37 kDa subunit, complete cds
          Length = 1379

 Score =  436 bits (220), Expect = e-119
 Identities = 297/323 (91%)
 Strand = Plus / Plus

                                                                       
Query: 148 gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaataccggccgaggcaggt 207
           ||||||||||||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 123 gatggcgccgctcgtgccgtcctcgcagccatgggtggagaaataccggccgaggcaggt 182

                                                                       
Query: 208 gaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctcgagaccgc 267
           |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 183 gaaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccaccaccctccagaccgc 242

                                                                       
Query: 268 cgacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgct 327
           |||| | |||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 243 cgaccttccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgct 302

                                                                       
Query: 328 cgccattgcctaccagctctacggcccagagctctacaaggcaagagttttggaacttaa 387
            |||||||| |||||||||||||| ||||||||||||||| |||||||| | ||||||||
Sbjct: 303 tgccattgcttaccagctctacggtccagagctctacaagtcaagagttctagaacttaa 362

                                                                       
Query: 388 tgccagtgatgaacggngaattaatgtggtgaggacaaagatcaaggattttgctgctgt 447
           ||| |||||||| ||  ||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 363 tgctagtgatgatcgtggaattaatgtggtgaggactaagatcaaggactttgctgctgt 422

                                  
Query: 448 ggctgttggttctgcacggaaag 470
            ||||||||||||||||| ||||
Sbjct: 423 tgctgttggttctgcacgaaaag 445
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>gb|AY105337.1| Zea mays PCO072101 mRNA sequence
          Length = 1550

 Score =  333 bits (168), Expect = 3e-88
 Identities = 284/323 (87%)
 Strand = Plus / Plus

                                                                       
Query: 148 gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaataccggccgaggcaggt 207
           |||||| ||||||||||||  ||| || ||||||||||||||||||||||||||||||||
Sbjct: 142 gatggccccgctcgtgccgatgtcgcagccatgggtggagaaataccggccgaggcaggt 201

                                                                       
Query: 208 gaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctcgagaccgc 267
            ||||| || || ||||||||||||||| | |||||||||| |||||||||| |||||||
Sbjct: 202 caaggatgtggctcaccaggaggaggtgattcgggtgctcaacaacaccctccagaccgc 261

                                                                       
Query: 268 cgacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgct 327
           |||| |||||||||||||||||||||| ||||| || ||||| ||||||||||| || ||
Sbjct: 262 cgacctgccgcacatgctgttctacggcccgccggggacgggaaagaccaccaccgcact 321

                                                                       
Query: 328 cgccattgcctaccagctctacggcccagagctctacaaggcaagagttttggaacttaa 387
            ||||| ||||||||||||||||| |||||||| || ||| |||| |||||||| || ||
Sbjct: 322 agccatcgcctaccagctctacggtccagagctgtataagtcaagggttttggagctcaa 381

                                                                       
Query: 388 tgccagtgatgaacggngaattaatgtggtgaggacaaagatcaaggattttgctgctgt 447
           ||| |||||||| ||  ||||||||||||||||||| || |||||| | |||||||||||
Sbjct: 382 tgctagtgatgatcgtggaattaatgtggtgaggacgaaaatcaagaactttgctgctgt 441

                                  
Query: 448 ggctgttggttctgcacggaaag 470
            ||||||||| ||||||||||||
Sbjct: 442 tgctgttggtactgcacggaaag 464
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>ref|NM_102018.2| Arabidopsis thaliana EMB1968; ATP binding / ATPase/ DNA binding /
           nucleoside-triphosphatase/ nucleotide binding AT1G21690
           (EMB1968) transcript variant AT1G21690.1 mRNA, complete
           cds
          Length = 1294

 Score =  159 bits (80), Expect = 1e-35
 Identities = 235/287 (81%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 53  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 112

                                                                       
Query: 230 gaggtggtccgggtgctcaccaacaccctcgagaccgccgacttgccgcacatgctgttc 289
           |||||||| || || ||||||||||| ||| |||| || ||||  ||||||||||| |||
Sbjct: 113 gaggtggttcgtgtcctcaccaacactctccagactgctgactgcccgcacatgctcttc 172

                                                                       
Query: 290 tacggtccgcctggcacggggaagaccaccactgcgctcgccattgcctaccagctctac 349
           || || || || ||||| || || ||||| ||||| || ||||| ||  |||||||||  
Sbjct: 173 tatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctcttt 232

                                                                       
Query: 350 ggcccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaatt 409
           || || || || |||||| | || || ||||| |||||||| ||||||||  |  | |||
Sbjct: 233 ggacctgaactatacaagtctagggtgttggagcttaatgcaagtgatgacagaggtatt 292

                                                          
Query: 410 aatgtggtgaggacaaagatcaaggattttgctgctgtggctgttgg 456
           ||||| ||  |||| ||||||||||||||||||||||| ||||||||
Sbjct: 293 aatgttgttcggactaagatcaaggattttgctgctgttgctgttgg 339
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>gb|BT010368.1| Arabidopsis thaliana At1g21690 mRNA, complete cds
          Length = 1020

 Score =  159 bits (80), Expect = 1e-35
 Identities = 235/287 (81%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 22  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 81

                                                                       
Query: 230 gaggtggtccgggtgctcaccaacaccctcgagaccgccgacttgccgcacatgctgttc 289
           |||||||| || || ||||||||||| ||| |||| || ||||  ||||||||||| |||
Sbjct: 82  gaggtggttcgtgtcctcaccaacactctccagactgctgactgcccgcacatgctcttc 141

                                                                       
Query: 290 tacggtccgcctggcacggggaagaccaccactgcgctcgccattgcctaccagctctac 349
           || || || || ||||| || || ||||| ||||| || ||||| ||  |||||||||  
Sbjct: 142 tatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctcttt 201

                                                                       
Query: 350 ggcccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaatt 409
           || || || || |||||| | || || ||||| |||||||| ||||||||  |  | |||
Sbjct: 202 ggacctgaactatacaagtctagggtgttggagcttaatgcaagtgatgacagaggtatt 261

                                                          
Query: 410 aatgtggtgaggacaaagatcaaggattttgctgctgtggctgttgg 456
           ||||| ||  |||| ||||||||||||||||||||||| ||||||||
Sbjct: 262 aatgttgttcggactaagatcaaggattttgctgctgttgctgttgg 308
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>gb|AY056210.1| Arabidopsis thaliana putative replication factor (At1g21690) mRNA,
           complete cds
          Length = 1313

 Score =  159 bits (80), Expect = 1e-35
 Identities = 235/287 (81%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 53  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 112

                                                                       
Query: 230 gaggtggtccgggtgctcaccaacaccctcgagaccgccgacttgccgcacatgctgttc 289
           |||||||| || || ||||||||||| ||| |||| || ||||  ||||||||||| |||
Sbjct: 113 gaggtggttcgtgtcctcaccaacactctccagactgctgactgcccgcacatgctcttc 172

                                                                       
Query: 290 tacggtccgcctggcacggggaagaccaccactgcgctcgccattgcctaccagctctac 349
           || || || || ||||| || || ||||| ||||| || ||||| ||  |||||||||  
Sbjct: 173 tatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctcttt 232

                                                                       
Query: 350 ggcccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaatt 409
           || || || || |||||| | || || ||||| |||||||| ||||||||  |  | |||
Sbjct: 233 ggacctgaactatacaagtctagggtgttggagcttaatgcaagtgatgacagaggtatt 292

                                                          
Query: 410 aatgtggtgaggacaaagatcaaggattttgctgctgtggctgttgg 456
           ||||| ||  |||| ||||||||||||||||||||||| ||||||||
Sbjct: 293 aatgttgttcggactaagatcaaggattttgctgctgttgctgttgg 339
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>gb|AY062637.1| Arabidopsis thaliana Similar replication factor C, 37-kDa subunit
           (At1g21690; F8K7.11) mRNA, complete cds
          Length = 1214

 Score =  159 bits (80), Expect = 1e-35
 Identities = 235/287 (81%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 53  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 112

                                                                       
Query: 230 gaggtggtccgggtgctcaccaacaccctcgagaccgccgacttgccgcacatgctgttc 289
           |||||||| || || ||||||||||| ||| |||| || ||||  ||||||||||| |||
Sbjct: 113 gaggtggttcgtgtcctcaccaacactctccagactgctgactgcccgcacatgctcttc 172

                                                                       
Query: 290 tacggtccgcctggcacggggaagaccaccactgcgctcgccattgcctaccagctctac 349
           || || || || ||||| || || ||||| ||||| || ||||| ||  |||||||||  
Sbjct: 173 tatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctcttt 232

                                                                       
Query: 350 ggcccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaatt 409
           || || || || |||||| | || || ||||| |||||||| ||||||||  |  | |||
Sbjct: 233 ggacctgaactatacaagtctagggtgttggagcttaatgcaagtgatgacagaggtatt 292

                                                          
Query: 410 aatgtggtgaggacaaagatcaaggattttgctgctgtggctgttgg 456
           ||||| ||  |||| ||||||||||||||||||||||| ||||||||
Sbjct: 293 aatgttgttcggactaagatcaaggattttgctgctgttgctgttgg 339
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>gb|AY084702.1| Arabidopsis thaliana clone 115488 mRNA, complete sequence
          Length = 1184

 Score =  159 bits (80), Expect = 1e-35
 Identities = 235/287 (81%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 52  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 111

                                                                       
Query: 230 gaggtggtccgggtgctcaccaacaccctcgagaccgccgacttgccgcacatgctgttc 289
           |||||||| || || ||||||||||| ||| |||| || ||||  ||||||||||| |||
Sbjct: 112 gaggtggttcgtgtcctcaccaacactctccagactgctgactgcccgcacatgctcttc 171

                                                                       
Query: 290 tacggtccgcctggcacggggaagaccaccactgcgctcgccattgcctaccagctctac 349
           || || || || ||||| || || ||||| ||||| || ||||| ||  |||||||||  
Sbjct: 172 tatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctcttt 231

                                                                       
Query: 350 ggcccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaatt 409
           || || || || |||||| | || || ||||| |||||||| ||||||||  |  | |||
Sbjct: 232 ggacctgaactatacaagtctagggtgttggagcttaatgcaagtgatgacagaggtatt 291

                                                          
Query: 410 aatgtggtgaggacaaagatcaaggattttgctgctgtggctgttgg 456
           ||||| ||  |||| ||||||||||||||||||||||| ||||||||
Sbjct: 292 aatgttgttcggactaagatcaaggattttgctgctgttgctgttgg 338
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  149 bits (75), Expect = 1e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                           
Query: 353     ccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaattaat 412
               ||||||||||||||| |||||||| | ||||||||||| |||||||| ||  ||||||||
Sbjct: 3873889 ccagagctctacaagtcaagagttctagaacttaatgctagtgatgatcgtggaattaat 3873948

                                                                         
Query: 413     gtggtgaggacaaagatcaaggattttgctgctgtggctgttggttctgcacggaaag 470
               ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 3873949 gtggtgaggactaagatcaaggactttgctgctgttgctgttggttctgcacgaaaag 3874006



 Score =  133 bits (67), Expect = 6e-28
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                           
Query: 193     ccggccgaggcaggtgaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaa 252
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 3872663 ccggccgaggcaggtgaaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccac 3872722

                                  
Query: 253     caccctcgagaccgccgac 271
               ||||||| |||||||||||
Sbjct: 3872723 caccctccagaccgccgac 3872741



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                           
Query: 275     ccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctcgccatt 334
               |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 3872838 ccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgcttgccatt 3872897

                                
Query: 335     gcctaccagctctacgg 351
               || ||||||||||||||
Sbjct: 3872898 gcttaccagctctacgg 3872914



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 148     gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaata 192
               ||||||||||||||||||| | || || |||||||||||||||||
Sbjct: 3872494 gatggcgccgctcgtgccgtcctcgcagccatgggtggagaaata 3872538



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      aaggaggagagatggcgccg 157
                ||||||||||||||||||||
Sbjct: 22490927 aaggaggagagatggcgccg 22490908
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  149 bits (75), Expect = 1e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                           
Query: 353     ccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaattaat 412
               ||||||||||||||| |||||||| | ||||||||||| |||||||| ||  ||||||||
Sbjct: 3873863 ccagagctctacaagtcaagagttctagaacttaatgctagtgatgatcgtggaattaat 3873922

                                                                         
Query: 413     gtggtgaggacaaagatcaaggattttgctgctgtggctgttggttctgcacggaaag 470
               ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 3873923 gtggtgaggactaagatcaaggactttgctgctgttgctgttggttctgcacgaaaag 3873980



 Score =  133 bits (67), Expect = 6e-28
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                           
Query: 193     ccggccgaggcaggtgaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaa 252
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 3872637 ccggccgaggcaggtgaaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccac 3872696

                                  
Query: 253     caccctcgagaccgccgac 271
               ||||||| |||||||||||
Sbjct: 3872697 caccctccagaccgccgac 3872715



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                           
Query: 275     ccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctcgccatt 334
               |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 3872812 ccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgcttgccatt 3872871

                                
Query: 335     gcctaccagctctacgg 351
               || ||||||||||||||
Sbjct: 3872872 gcttaccagctctacgg 3872888



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 148     gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaata 192
               ||||||||||||||||||| | || || |||||||||||||||||
Sbjct: 3872468 gatggcgccgctcgtgccgtcctcgcagccatgggtggagaaata 3872512



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      aaggaggagagatggcgccg 157
                ||||||||||||||||||||
Sbjct: 22419272 aaggaggagagatggcgccg 22419253
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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152090

 Score =  149 bits (75), Expect = 1e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                         
Query: 353   ccagagctctacaaggcaagagttttggaacttaatgccagtgatgaacggngaattaat 412
             ||||||||||||||| |||||||| | ||||||||||| |||||||| ||  ||||||||
Sbjct: 35865 ccagagctctacaagtcaagagttctagaacttaatgctagtgatgatcgtggaattaat 35924

                                                                       
Query: 413   gtggtgaggacaaagatcaaggattttgctgctgtggctgttggttctgcacggaaag 470
             ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 35925 gtggtgaggactaagatcaaggactttgctgctgttgctgttggttctgcacgaaaag 35982



 Score =  133 bits (67), Expect = 6e-28
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                         
Query: 193   ccggccgaggcaggtgaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaa 252
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 34639 ccggccgaggcaggtgaaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccac 34698

                                
Query: 253   caccctcgagaccgccgac 271
             ||||||| |||||||||||
Sbjct: 34699 caccctccagaccgccgac 34717



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                         
Query: 275   ccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctcgccatt 334
             |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 34814 ccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgcttgccatt 34873

                              
Query: 335   gcctaccagctctacgg 351
             || ||||||||||||||
Sbjct: 34874 gcttaccagctctacgg 34890



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 148   gatggcgccgctcgtgccgccgtcacaaccatgggtggagaaata 192
             ||||||||||||||||||| | || || |||||||||||||||||
Sbjct: 34470 gatggcgccgctcgtgccgtcctcgcagccatgggtggagaaata 34514
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>ref|NM_179364.1| Arabidopsis thaliana EMB1968; ATP binding / ATPase/ DNA binding /
           nucleoside-triphosphatase/ nucleotide binding AT1G21690
           (EMB1968) transcript variant AT1G21690.2 mRNA, complete
           cds
          Length = 1258

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 146/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 275 ccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctcgccatt 334
           ||||||||||| ||||| || || || ||||| || || ||||| ||||| || ||||| 
Sbjct: 122 ccgcacatgctcttctatggaccaccaggcactggaaaaaccactactgctcttgccatc 181

                                                                       
Query: 335 gcctaccagctctacggcccagagctctacaaggcaagagttttggaacttaatgccagt 394
           ||  |||||||||  || || || || |||||| | || || ||||| |||||||| |||
Sbjct: 182 gctcaccagctctttggacctgaactatacaagtctagggtgttggagcttaatgcaagt 241

                                                                       
Query: 395 gatgaacggngaattaatgtggtgaggacaaagatcaaggattttgctgctgtggctgtt 454
           |||||  |  | |||||||| ||  |||| ||||||||||||||||||||||| ||||||
Sbjct: 242 gatgacagaggtattaatgttgttcggactaagatcaaggattttgctgctgttgctgtt 301

             
Query: 455 gg 456
           ||
Sbjct: 302 gg 303



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcacaaccatgggtggagaaataccggccgaggcaggtgaaggacgtcgcgcaccaggag 229
           ||||| |||||||| |||||||||||||||| |||||| |||||||| || |||||||| 
Sbjct: 53  tcacagccatgggttgagaaataccggccgaagcaggttaaggacgtggctcaccaggaa 112

                 
Query: 230 gaggtg 235
           ||||||
Sbjct: 113 gaggtg 118
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>gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete sequence
          Length = 133358

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 374    gttttggaacttaatgccagtgatgaacggngaattaatgtggtgaggacaaagatcaag 433
              ||||||||||||||||| |||||||| ||  | |||||||| ||  |||| |||||||| 
Sbjct: 132567 gttttggaacttaatgctagtgatgatcgtggtattaatgttgttcggactaagatcaaa 132508

                                  
Query: 434    gattttgctgctgtggctgt 453
              ||||| |||||||| |||||
Sbjct: 132507 gatttcgctgctgtcgctgt 132488
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>gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 sequence, complete sequence
          Length = 98581

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 377   ttggaacttaatgccagtgatgaacggngaattaatgtggtgaggacaaagatcaaggat 436
             ||||| |||||||| ||||||||  |  | |||||||| ||  |||| ||||||||||||
Sbjct: 45871 ttggagcttaatgcaagtgatgacagaggtattaatgttgttcggactaagatcaaggat 45930

                                 
Query: 437   tttgctgctgtggctgttgg 456
             ||||||||||| ||||||||
Sbjct: 45931 tttgctgctgttgctgttgg 45950



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 193   ccggccgaggcaggtgaaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaa 252
             |||||||| |||||| |||||||| || |||||||| |||||||| || || ||||||||
Sbjct: 45047 ccggccgaagcaggttaaggacgtggctcaccaggaagaggtggttcgtgtcctcaccaa 45106

                         
Query: 253   caccctcgagac 264
             ||| ||| ||||
Sbjct: 45107 cactctccagac 45118
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>ref|NM_104994.2| Arabidopsis thaliana ATP binding / ATPase/ DNA binding /
           nucleoside-triphosphatase/ nucleotide binding AT1G63160
           mRNA, complete cds
          Length = 1248

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 174 aaccatgggtggagaaataccggccgag 201
           |||||||||||||||||||| |||||||
Sbjct: 86  aaccatgggtggagaaatacaggccgag 113
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>emb|BX813429.1|CNS0ADU1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB17ZA06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1224

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 174 aaccatgggtggagaaataccggccgag 201
           |||||||||||||||||||| |||||||
Sbjct: 86  aaccatgggtggagaaatacaggccgag 113
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>emb|BX816906.1|CNS0AD5X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH75ZF09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1175

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 174 aaccatgggtggagaaataccggccgag 201
           |||||||||||||||||||| |||||||
Sbjct: 66  aaccatgggtggagaaatacaggccgag 93
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>gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16M19 genomic sequence, complete
             sequence
          Length = 100512

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 174   aaccatgggtggagaaataccggccgag 201
             |||||||||||||||||||| |||||||
Sbjct: 74955 aaccatgggtggagaaatacaggccgag 74928
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 221     caccaggaggaggtggtccgggtgctc 247
               |||||||||||||||| ||||||||||
Sbjct: 1067013 caccaggaggaggtggaccgggtgctc 1066987
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 221    caccaggaggaggtggtccgggtgctc 247
              |||||||||||||||| ||||||||||
Sbjct: 739991 caccaggaggaggtggaccgggtgctc 739965
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>ref|XM_474873.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2859

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 229 ggaggtggtccgggtgctcacc 250
           ||||||||||||||||||||||
Sbjct: 624 ggaggtggtccgggtgctcacc 645
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 288     tctacggtccgcctggcacggggaagaccaccac 321
               |||||||||||||||| || |||||||| |||||
Sbjct: 1337191 tctacggtccgcctggtaccgggaagacgaccac 1337158
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>ref|XM_838337.1| Leishmania major strain Friedlin replication factor C, subunit 3
           (LMJ_1254) partial mRNA
          Length = 1095

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 288 tctacggtccgcctggcacggggaagaccaccac 321
           |||||||||||||||| || |||||||| |||||
Sbjct: 164 tctacggtccgcctggtaccgggaagacgaccac 197
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>ref|XM_817436.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.4890)
            partial mRNA
          Length = 2169

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 291  acggtccgcctggcacggggaa 312
            ||||||||||||||||||||||
Sbjct: 1208 acggtccgcctggcacggggaa 1229
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 293     ggtccgcctggcacggggaagaccac 318
               |||||||| |||||||||||||||||
Sbjct: 2441728 ggtccgcccggcacggggaagaccac 2441703
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>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11,
              complete sequence
          Length = 149085

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 229    ggaggtggtccgggtgctcacc 250
              ||||||||||||||||||||||
Sbjct: 113008 ggaggtggtccgggtgctcacc 113029
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 229     ggaggtggtccgggtgctcacc 250
               ||||||||||||||||||||||
Sbjct: 7466655 ggaggtggtccgggtgctcacc 7466676
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3789986 cttaatgccagtgatgaacgg 3789966
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>gb|DQ440403.1| Aedes aegypti clone AET-538 replication factor C mRNA, partial cds
          Length = 1074

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 176 ccatgggtggagaaataccggccga 200
           |||||||| ||||||||||||||||
Sbjct: 100 ccatgggtcgagaaataccggccga 124
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>gb|AF247499.1| Drosophila melanogaster replication factor C subunit 3 mRNA,
           complete cds
          Length = 1148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 273 tgccgcacatgctgttctacggtccgcctggcacggg 309
           |||||||  ||||||||||||| || |||||||||||
Sbjct: 194 tgccgcatttgctgttctacggaccacctggcacggg 230
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 4250672 cttaatgccagtgatgaacgg 4250652
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 4078202 cttaatgccagtgatgaacgg 4078182
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3817693 cttaatgccagtgatgaacgg 3817673
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>emb|CR938510.1| Single read from an extremity of a full-length cDNA clone made from
           Aedes aegypti total adult females. 5-prime end of clone
           KW0AAA1YK14AAM1 from strain Liverpool of Aedes aegypti
           (yellow fever mosquito)
          Length = 582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 176 ccatgggtggagaaataccggccga 200
           |||||||| ||||||||||||||||
Sbjct: 248 ccatgggtcgagaaataccggccga 272
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3820745 cttaatgccagtgatgaacgg 3820765
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3985271 cttaatgccagtgatgaacgg 3985291
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>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence
          Length = 203755

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 435    attttgctgctgtggctgttg 455
              |||||||||||||||||||||
Sbjct: 101856 attttgctgctgtggctgttg 101836
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 4632515 cttaatgccagtgatgaacgg 4632495
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>emb|CR937009.1| uncultured archaeon fos0644c1
          Length = 39253

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 292  cggtccgcctggcacggggaagacc 316
            |||||||||||||||||| ||||||
Sbjct: 1657 cggtccgcctggcacgggaaagacc 1633
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 4563532 cttaatgccagtgatgaacgg 4563512
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3813196 cttaatgccagtgatgaacgg 3813176
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>gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes
          Length = 136254

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 383  cttaatgccagtgatgaacgg 403
            |||||||||||||||||||||
Sbjct: 9062 cttaatgccagtgatgaacgg 9042
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3749955 cttaatgccagtgatgaacgg 3749975
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 383     cttaatgccagtgatgaacgg 403
               |||||||||||||||||||||
Sbjct: 3947431 cttaatgccagtgatgaacgg 3947451
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>gb|AC159427.1| Trypanosoma brucei chromosome 8 clone RPCI93-27P2, complete sequence
          Length = 146393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 439    tgctgctgtggctgttggttctgc 462
              |||| |||||||||||||||||||
Sbjct: 140398 tgcttctgtggctgttggttctgc 140421
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>gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 section 10 of 16 of the
              complete genome
          Length = 290294

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    tttggaacttaatgccagtg 395
              ||||||||||||||||||||
Sbjct: 213116 tttggaacttaatgccagtg 213097
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>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence
          Length = 179428

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 282    tgctgttctacggtccgcctggcacggg 309
              ||||||||||||| || |||||||||||
Sbjct: 169747 tgctgttctacggaccacctggcacggg 169720
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     tttggaacttaatgccagtg 395
               ||||||||||||||||||||
Sbjct: 1475516 tttggaacttaatgccagtg 1475497
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>ref|XM_805026.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510525.120) partial mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacggtccgcctggcacggg 309
           ||||||||||||||||||||
Sbjct: 955 tacggtccgcctggcacggg 974
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>ref|XM_814270.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511817.190) partial mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacggtccgcctggcacggg 309
           ||||||||||||||||||||
Sbjct: 955 tacggtccgcctggcacggg 974
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>gb|AY069598.1| Drosophila melanogaster LD35209 full insert cDNA
          Length = 1174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 tgggtggagaaataccggcc 198
           ||||||||||||||||||||
Sbjct: 110 tgggtggagaaataccggcc 129
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>emb|AL359095.17| Human DNA sequence from clone RP11-70J12 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 32415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   ttaatgtggtgaggacaaag 427
             ||||||||||||||||||||
Sbjct: 23113 ttaatgtggtgaggacaaag 23094
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>ref|XM_780852.1| PREDICTED: Strongylocentrotus purpuratus similar to AT rich
            interactive domain 1B (SWI1-like) isoform 3 (LOC580818),
            mRNA
          Length = 7347

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 436  ttttgctgctgtggctgttggttc 459
            ||||||||||| ||||||||||||
Sbjct: 1385 ttttgctgctgcggctgttggttc 1362
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     tttggaacttaatgccagtg 395
               ||||||||||||||||||||
Sbjct: 3390151 tttggaacttaatgccagtg 3390170
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>emb|AJ414154.1| Yersinia pestis strain CO92 complete genome; segment 14/20
          Length = 204050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   tttggaacttaatgccagtg 395
             ||||||||||||||||||||
Sbjct: 74419 tttggaacttaatgccagtg 74438
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     ccactgcgctcgccattgcc 337
               ||||||||||||||||||||
Sbjct: 4786203 ccactgcgctcgccattgcc 4786222
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>gb|AY119188.1| Drosophila melanogaster SD11293 full insert cDNA
          Length = 1136

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 282 tgctgttctacggtccgcctggcacggg 309
           ||||||||||||| || |||||||||||
Sbjct: 194 tgctgttctacggaccacctggcacggg 221
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>dbj|AB225925.1| Aspergillus oryzae cDNA, contig sequence: AoEST2780
          Length = 1448

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 282 tgctgttctacggtccgcctggcacggggaagacca 317
           |||||||||||||||| ||||| || || |||||||
Sbjct: 317 tgctgttctacggtcctcctggtactggtaagacca 352
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>ref|NM_169093.1| Drosophila melanogaster Xe7 CG2179-RA, transcript variant A (Xe7),
            mRNA
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  ttgctgctgtggctgttggt 457
            ||||||||||||||||||||
Sbjct: 2763 ttgctgctgtggctgttggt 2744
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 282    tgctgttctacggtccgcctggcacggggaagacca 317
              |||||||||||||||| ||||| || || |||||||
Sbjct: 282835 tgctgttctacggtcctcctggtactggtaagacca 282800
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>ref|NM_141315.2| Drosophila melanogaster Xe7 CG2179-RB, transcript variant B (Xe7),
            mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  ttgctgctgtggctgttggt 457
            ||||||||||||||||||||
Sbjct: 2108 ttgctgctgtggctgttggt 2089
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>ref|NM_135555.2| Drosophila melanogaster RfC3 CG5313-RA (RfC3), mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 282 tgctgttctacggtccgcctggcacggg 309
           ||||||||||||| || |||||||||||
Sbjct: 194 tgctgttctacggaccacctggcacggg 221
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>ref|NM_133017.2| Drosophila melanogaster CG8142-RA (CG8142), mRNA
          Length = 1190

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 tgggtggagaaataccggcc 198
           ||||||||||||||||||||
Sbjct: 145 tgggtggagaaataccggcc 164
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>dbj|AK131773.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700103L20 product:unclassifiable, full
           insert sequence
          Length = 1251

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 gcaccaggaggaggtggtcc 239
           ||||||||||||||||||||
Sbjct: 225 gcaccaggaggaggtggtcc 244
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>gb|AY058715.1| Drosophila melanogaster LD45348 full length cDNA
          Length = 1634

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  ttgctgctgtggctgttggt 457
            ||||||||||||||||||||
Sbjct: 1434 ttgctgctgtggctgttggt 1415
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 292     cggtccgcctggcacggggaagac 315
               |||||||||||||||||| |||||
Sbjct: 2080264 cggtccgcctggcacgggtaagac 2080287
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 71       gccgccgcccgccggtcgcc 90
                ||||||||||||||||||||
Sbjct: 17183020 gccgccgcccgccggtcgcc 17183001
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 71       gccgccgcccgccggtcgcc 90
                ||||||||||||||||||||
Sbjct: 10664345 gccgccgcccgccggtcgcc 10664326
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>gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, region 83A-83B, BAC clone
             BACR03P13, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   ttgctgctgtggctgttggt 457
             ||||||||||||||||||||
Sbjct: 94930 ttgctgctgtggctgttggt 94949
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>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036B02
          Length = 168253

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    gccgccgcccgccggtcgcc 90
             ||||||||||||||||||||
Sbjct: 17408 gccgccgcccgccggtcgcc 17389
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>gb|AY103675.1| Zea mays PCO125717 mRNA sequence
          Length = 1581

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 65 aaccgagccgccgcccgccg 84
          ||||||||||||||||||||
Sbjct: 62 aaccgagccgccgcccgccg 43
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>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones
             DS00953 and BACR48K04, complete sequence
          Length = 161754

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 282   tgctgttctacggtccgcctggcacggg 309
             ||||||||||||| || |||||||||||
Sbjct: 79363 tgctgttctacggaccacctggcacggg 79390
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>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete
              sequence
          Length = 269102

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 282    tgctgttctacggtccgcctggcacggg 309
              ||||||||||||| || |||||||||||
Sbjct: 181631 tgctgttctacggaccacctggcacggg 181658
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>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete
              sequence
          Length = 326091

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    ttgctgctgtggctgttggt 457
              ||||||||||||||||||||
Sbjct: 255001 ttgctgctgtggctgttggt 255020
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>gb|BT001634.1| Drosophila melanogaster RE38701 full insert cDNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  ttgctgctgtggctgttggt 457
            ||||||||||||||||||||
Sbjct: 2845 ttgctgctgtggctgttggt 2826
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 71       gccgccgcccgccggtcgcc 90
                ||||||||||||||||||||
Sbjct: 17278206 gccgccgcccgccggtcgcc 17278187
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>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183414

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aaggaggagagatggcgccg 157
             ||||||||||||||||||||
Sbjct: 16607 aaggaggagagatggcgccg 16626
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>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete
              sequence
          Length = 202342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    gcaccaggaggaggtggtcc 239
              ||||||||||||||||||||
Sbjct: 116536 gcaccaggaggaggtggtcc 116555


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,541,862
Number of Sequences: 3902068
Number of extensions: 3541862
Number of successful extensions: 110860
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109799
Number of HSP's gapped (non-prelim): 1055
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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