| Clone Name | bast56b01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FTSK_BRAJA (Q89WR2) DNA translocase ftsK | 30 | 1.9 | 2 | GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog | 28 | 5.5 |
|---|
>FTSK_BRAJA (Q89WR2) DNA translocase ftsK| Length = 825 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +2 Query: 71 PAVLYPPPASVFVTAMSVVSFASLASAGL 157 PAV++ PP ++ T + V+ FA++A+ L Sbjct: 156 PAVIFGPPGMIYRTVLGVILFAAMAATFL 184
>GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog| Length = 917 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 8 RADPEANDRERD*EMWPPSLLP 73 R D E +RERD E PP LLP Sbjct: 13 RNDSEEEERERDEEQEPPPLLP 34 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,877,904 Number of Sequences: 219361 Number of extensions: 288119 Number of successful extensions: 1234 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1231 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)