>SPR2B_MOUSE (O70554) Small proline-rich protein 2B|
          Length = 98

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 11 PKPKTPDLCCDPIPPPK 61
          P+P  P +CC+P PPPK
Sbjct: 33 PEPCPPPVCCEPCPPPK 49



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 11 PKPKTPDLCCDPIPPP 58
          P+P  P +CC+P PPP
Sbjct: 51 PEPCPPPVCCEPCPPP 66

>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)|
          Length = 1758

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 450  DGRDGTAERKASRAFSGRPAEAYEQRMAERCGSVGEAGM 334
            DG  G    K  R F+G P E  E   A R G  G+AG+
Sbjct: 1002 DGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGL 1040

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 450  DGRDGTAERKASRAFSGRPAEAYEQRMAERCGSVGEAGM 334
            DG  G    K  R F+G P E  E   A R G  GE G+
Sbjct: 1004 DGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGL 1042

>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +2

Query: 323  LSSHIPASPTEPHLSAILCSYASAGLPEKALEAFRSAVPSLPSPISSMP 469
            LSS + ASPT P            G P       RSA PS+P P    P
Sbjct: 3501 LSSAVQASPTSP-----------GGSPSSPSSGQRSASPSVPGPTKPKP 3538

>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +2

Query: 335 IPASPTEPH---LSAILCSYASAGLP 403
           +P SP+ PH   LSA+LC  +S G P
Sbjct: 354 VPVSPSSPHAPDLSALLCRNSSLGSP 379

>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 447 GRDGTAERKASRAFSGRPAEAYEQRMAERCGSVGEAGM 334
           G++G   +      +GRP E  E  +A R GS G AG+
Sbjct: 844 GQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGL 881


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,844,524
Number of Sequences: 219361
Number of extensions: 422364
Number of successful extensions: 1906
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)