| Clone Name | bast56a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506892.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.33 mRNA Length = 1753 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 219 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 278 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 279 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 338 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 339 ccggcgtgcctccgccg 355
>ref|XM_467115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1702 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 128 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 187 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 188 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 247 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 248 ccggcgtgcctccgccg 264
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 26515898 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 26515839 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 26515838 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 26515779 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 26515778 ccggcgtgcctccgccg 26515762 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 33927777 ggcgccggcgccggcggacg 33927796 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 catggcgccggcgccggcgg 251 |||||||||||||||||||| Sbjct: 20796308 catggcgccggcgccggcgg 20796289
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 115814 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 115755 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 115754 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 115695 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 115694 ccggcgtgcctccgccg 115678
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 58279 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 58220 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 58219 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 58160 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 58159 ccggcgtgcctccgccg 58143
>dbj|AK101947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D02, full insert sequence Length = 1701 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 127 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 186 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 187 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 246 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 247 ccggcgtgcctccgccg 263
>dbj|AK060657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A05, full insert sequence Length = 1753 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 218 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 277 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| || Sbjct: 278 taccggtacctccggccgcgcctccgcggcctgcggctcgaccgcctcacgtcccgcctc 337 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 338 ccggcgtgcctccgccg 354
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 121 bits (61), Expect = 2e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 281 aaggggcggaccaactccatcctgctccccatcctcggcgtcctcttcgcctacctgctc 340 |||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 221650 aaggggaggagcaactccatcctgctccccatcctcgggatccttctcgtctacctgctg 221591 Query: 341 taccgctacctccgcccgcgcctccgcggcctccgcctcgaccgcctcccgttccgcgtc 400 ||||| |||||||| |||||||||||||| || || ||||||||||| ||| |||| || Sbjct: 221590 taccggtacctccggccgcgcctccgcgggctgcgggtcgaccgcctcacgtcccgcctc 221531 Query: 401 ccggactgcctccgccg 417 |||| ||||||||||| Sbjct: 221530 ccggcgtgcctccgccg 221514
>ref|XM_550002.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 313 cctcggcgtcctcttcgcctacctgctctacc 344 ||||||| |||||| ||||||||||||||||| Sbjct: 369 cctcggcatcctctacgcctacctgctctacc 400
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 313 cctcggcgtcctcttcgcctacctgctctacc 344 ||||||| |||||| ||||||||||||||||| Sbjct: 1569252 cctcggcatcctctacgcctacctgctctacc 1569221 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 19844350 gcgccggcggacggggtggc 19844369
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 313 cctcggcgtcctcttcgcctacctgctctacc 344 ||||||| |||||| ||||||||||||||||| Sbjct: 6483 cctcggcatcctctacgcctacctgctctacc 6452
>gb|BC030191.1| Homo sapiens cDNA clone IMAGE:5199055, partial cds Length = 656 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacggg 256 |||||||||||||||||||||| Sbjct: 623 ggcgccggcgccggcggacggg 602
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 cgcctccgcggcctccgcctcg 380 |||||||||||||||||||||| Sbjct: 5148551 cgcctccgcggcctccgcctcg 5148572
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 ccacgagcccccaccaccaccg 191 |||||||||||||||||||||| Sbjct: 12527 ccacgagcccccaccaccaccg 12548
>gb|AC007356.8|AC007356 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR24H09, complete sequence Length = 189557 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 ccacgagcccccaccaccaccg 191 |||||||||||||||||||||| Sbjct: 107604 ccacgagcccccaccaccaccg 107625
>ref|NM_196747.1| Oryza sativa (japonica cultivar-group) contains similarity to anion transporter (OSJNBa0076M18.1), mRNA Length = 1584 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 97 ctccccatcctcggcctcctcttcg 121
>gb|BT016257.1| Zea mays clone Contig90 mRNA sequence Length = 1558 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ccggcgccggcggacggggtg 259 ||||||||||||||||||||| Sbjct: 553 ccggcgccggcggacggggtg 573
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 112883 ccgcccgcgcctccgccgcctccgc 112907
>gb|AC132470.3| Mus musculus BAC clone RP23-96F5 from chromosome 14, complete sequence Length = 206002 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 caaaaaacaagtagccaggca 111 ||||||||||||||||||||| Sbjct: 14995 caaaaaacaagtagccaggca 15015
>emb|AL031295.1|HS886K2 Human DNA sequence from clone RP5-886K2 on chromosome 1p35.1-36.12 Contains a neuronal thread protein (AD7C-NTP) pseudogene, the TCEB3 gene for transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A), two novel genes, a novel gene (HT014), the LYPLA2 gene for lysophospholipase II, the GALE gene for UDP-galactose-4-epimerase and the HMGCL gene for 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria), complete sequence Length = 124001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ctccccatcctcggcgtcctc 325 ||||||||||||||||||||| Sbjct: 91063 ctccccatcctcggcgtcctc 91043
>gb|DQ447934.1| Physalacria bambusae isolate AFTOL-ID 515 RNA polymerase II largest subunit (rpb1) gene, partial cds Length = 1371 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ccatcctgctccccatcctcg 317 ||||||||||||||||||||| Sbjct: 820 ccatcctgctccccatcctcg 800
>gb|BC070458.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, mRNA (cDNA clone MGC:96425 IMAGE:30603578), complete cds Length = 2052 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 52 ccgcccgcgcctccgccgcctccgc 76
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 cgcgcctccgcggcctccgcctcgaccgcctcc 389 ||||||||||| ||||||||||| |||||||| Sbjct: 3272334 cgcgcctccgccgcctccgcctccgccgcctcc 3272302
>dbj|AK170057.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630013G24 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 2098 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 54 ccgcccgcgcctccgccgcctccgc 78
>dbj|AK169007.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920073K22 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 1618 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 58 ccgcccgcgcctccgccgcctccgc 82
>dbj|AK084801.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330045B02 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 2113 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 69 ccgcccgcgcctccgccgcctccgc 93
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 241 ggcgccggcggacggggtggcctcggacg 269 ||||||||||||| |||||| |||||||| Sbjct: 107706 ggcgccggcggactgggtggactcggacg 107678 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 806798 ggcgccggcgccggcggacg 806779
>dbj|AK039491.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330050B22 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 2100 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 56 ccgcccgcgcctccgccgcctccgc 80
>dbj|AK004710.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200011K07 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 1355 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 64 ccgcccgcgcctccgccgcctccgc 88
>dbj|AK075813.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010007A20 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 1628 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 69 ccgcccgcgcctccgccgcctccgc 93
>dbj|AK075800.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810054L20 product:solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2, full insert sequence Length = 1630 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 69 ccgcccgcgcctccgccgcctccgc 93
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 4302459 ctccccatcctcggcctcctcttcg 4302483
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 15721681 ctccccatcctcggcctcctcttcg 15721705
>gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0076M18, complete sequence Length = 132647 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 16641 ctccccatcctcggcctcctcttcg 16665
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 caaaaaacaagtagccaggca 111 ||||||||||||||||||||| Sbjct: 63071 caaaaaacaagtagccaggca 63051
>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence Length = 166978 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gccagagccgcaggcaggcgc 217 ||||||||||||||||||||| Sbjct: 156672 gccagagccgcaggcaggcgc 156652
>ref|NM_210728.1| Eremothecium gossypii AFL176Cp (AFL176C), mRNA Length = 1815 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 ggcgccggcggacggggtggcctcggacg 269 ||||||||||||| |||||| |||||||| Sbjct: 510 ggcgccggcggactgggtggactcggacg 538
>dbj|AK072242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169G24, full insert sequence Length = 2513 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 494 ctccccatcctcggcctcctcttcg 518
>gb|AY109640.1| Zea mays CL1711_1 mRNA sequence Length = 1547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ccggcgccggcggacggggtg 259 ||||||||||||||||||||| Sbjct: 570 ccggcgccggcggacggggtg 590
>ref|NM_023055.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 2 (Slc9a3r2), transcript variant A, mRNA Length = 2085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 41 ccgcccgcgcctccgccgcctccgc 65
>dbj|AB026490.1| Mus musculus gene for mSlc9a3r2/E3karp/Sip-1/Tka-1/Octs2 and mNthl1, complete cds and partial sequence Length = 13852 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 2362 ccgcccgcgcctccgccgcctccgc 2386
>gb|U95180.1|ZMU95180 Zea mays endosperm specific protein mRNA, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ccggcgccggcggacggggtg 259 ||||||||||||||||||||| Sbjct: 570 ccggcgccggcggacggggtg 590
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 15729922 ctccccatcctcggcctcctcttcg 15729946
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 4302446 ctccccatcctcggcctcctcttcg 4302470
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ctccccatcctcggcgtcctcttcg 329 ||||||||||||||| ||||||||| Sbjct: 149252 ctccccatcctcggcctcctcttcg 149228
>dbj|AB026489.1| Mus musculus mRNA for mSlc9a3r2/E3karp/Sip-1/Tka-1/Octs2, complete cds Length = 2085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcctccgc 376 |||||||||||||||| |||||||| Sbjct: 41 ccgcccgcgcctccgccgcctccgc 65
>ref|NM_128608.1| Arabidopsis thaliana ATP binding AT2G30560 mRNA, complete cds Length = 516 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcccccaccaccaccgcttt 195 |||||||||||||||||||| Sbjct: 144 gcccccaccaccaccgcttt 125
>ref|XM_482991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 453 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 243 gcgccggcggacggggtggc 224
>ref|XM_468270.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 270 ggcgccggcgccggcggacg 289
>ref|XM_466164.1| Oryza sativa (japonica cultivar-group), mRNA Length = 838 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 catggcgccggcgccggcgg 251 |||||||||||||||||||| Sbjct: 668 catggcgccggcgccggcgg 649
>ref|NM_193283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 210 gcgccggcggacggggtggc 191
>ref|XM_469637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1057 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 540 ggcgccggcgccggcggacg 521
>ref|XM_469505.1| Oryza sativa (japonica cultivar-group), mRNA Length = 255 Score = 40.1 bits (20), Expect = 5.7 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Minus Query: 354 gcccgcgcctccgcggcctccgcctcgaccgcctcccgttcc 395 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 146 gcccgcgcctccgc---ctccgcctcggcctcctcccgttcc 108
>ref|XM_478476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1621 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atggcgccggcgccggcgga 252 |||||||||||||||||||| Sbjct: 1042 atggcgccggcgccggcgga 1023
>ref|XM_472211.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 717 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tggcgccggcgccggcggacgggg 257 |||||||||||||||||| ||||| Sbjct: 81 tggcgccggcgccggcggccgggg 104
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 120301 gcgccggcggacggggtggc 120282
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 12672 gcgccggcggacggggtggc 12653
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 40.1 bits (20), Expect = 5.7 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Minus Query: 354 gcccgcgcctccgcggcctccgcctcgaccgcctcccgttcc 395 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 57855 gcccgcgcctccgc---ctccgcctcggcctcctcccgttcc 57817
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 32449 gcctccgcggcctccgcctc 32468
>ref|XM_369005.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00239.4) partial mRNA Length = 4203 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggcgccggcggacggggtgg 260 |||||||||||||||||||| Sbjct: 3243 ggcgccggcggacggggtgg 3224
>ref|XM_429371.1| PREDICTED: Gallus gallus LOC415912 (LOC415912), mRNA Length = 861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcc 371 |||||||||||||||||||| Sbjct: 586 ccgcccgcgcctccgcggcc 605
>ref|NM_029786.1| Mus musculus protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (Pomgnt1), transcript variant 2, mRNA Length = 2612 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 26 gcctccgcggcctccgcctc 7
>gb|BC052706.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:64707 IMAGE:5702150), complete cds Length = 4306 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 57 gcctccgcggcctccgcctc 38
>gb|BC054800.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:65691 IMAGE:6850337), complete cds Length = 4332 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 74 gcctccgcggcctccgcctc 55
>ref|XM_603731.2| PREDICTED: Bos taurus similar to transcriptional repressor NAC1 (LOC525378), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 40 gcctccgcggcctccgcctc 21
>ref|NM_052876.2| Homo sapiens BTB (POZ) domain containing 14B (BTBD14B), mRNA Length = 4556 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 46 gcctccgcggcctccgcctc 27
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tcgcctacctgctctaccgc 346 |||||||||||||||||||| Sbjct: 360177 tcgcctacctgctctaccgc 360158
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 29912090 ggcgccggcgccggcggacg 29912071 Score = 40.1 bits (20), Expect = 5.7 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 354 gcccgcgcctccgcggcctccgcctcgaccgcctcccgttcc 395 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 28355187 gcccgcgcctccgc---ctccgcctcggcctcctcccgttcc 28355225
>gb|BC055396.1| Homo sapiens BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:61553 IMAGE:6142288), complete cds Length = 4499 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 37 gcctccgcggcctccgcctc 18
>ref|XM_842665.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0735) partial mRNA Length = 2274 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tcgcctacctgctctaccgc 346 |||||||||||||||||||| Sbjct: 2186 tcgcctacctgctctaccgc 2167
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 98516 ggcgccggcgccggcggacg 98535
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 tcccggactgcctccgccgt 418 |||||||||||||||||||| Sbjct: 1718234 tcccggactgcctccgccgt 1718215
>gb|AC012184.7| Homo sapiens chromosome 16 clone RP11-529K1, complete sequence Length = 196010 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccaaagcaagggcctttgcc 153 |||||||||||||||||||| Sbjct: 122127 ccaaagcaagggcctttgcc 122108
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 309 ccatcctcggcgtcctcttcgcctacctgctc 340 ||||||||||||| || |||| |||||||||| Sbjct: 1511727 ccatcctcggcgtgctgttcgtctacctgctc 1511696
>gb|AC023049.14| Homo sapiens 3 BAC RP11-468F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117951 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 caaaaaacaagtagccaggcaagg 114 |||||||||| ||||||||||||| Sbjct: 66545 caaaaaacaaatagccaggcaagg 66522
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tggcgccggcgccggcggacgggg 257 |||||||||||||||||| ||||| Sbjct: 59986 tggcgccggcgccggcggccgggg 60009
>gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic sequence, complete sequence Length = 104861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcccccaccaccaccgcttt 195 |||||||||||||||||||| Sbjct: 35886 gcccccaccaccaccgcttt 35905
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 88981 gcgccggcggacggggtggc 88962
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 78031 ggcgccggcgccggcggacg 78012
>dbj|AK002638.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610016I07 product:RIKEN cDNA 0610016I07 gene, full insert sequence Length = 2612 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 26 gcctccgcggcctccgcctc 7
>dbj|AK012935.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810049M13 product:NAC-1 PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 2887 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 57 gcctccgcggcctccgcctc 38
>gb|AC005546.1|AC005546 Homo sapiens chromosome 19, cosmid R29425, complete sequence Length = 41172 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 25995 gcctccgcggcctccgcctc 25976
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 tcgcctacctgctctaccgctacc 350 ||||| |||||||||||||||||| Sbjct: 2069707 tcgccgacctgctctaccgctacc 2069730
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tggcgccggcgccggcggacgggg 257 |||||||||||||||||| ||||| Sbjct: 18479359 tggcgccggcgccggcggccgggg 18479382
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 7350497 gcgccggcggacggggtggc 7350516
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 23752141 gcgccggcggacggggtggc 23752122
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cttcgcctacctgctctacc 344 |||||||||||||||||||| Sbjct: 22527142 cttcgcctacctgctctacc 22527161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atggcgccggcgccggcgga 252 |||||||||||||||||||| Sbjct: 20471198 atggcgccggcgccggcgga 20471179
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 10438266 gcgccggcggacggggtggc 10438285
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 30003512 ggcgccggcgccggcggacg 30003493 Score = 40.1 bits (20), Expect = 5.7 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 354 gcccgcgcctccgcggcctccgcctcgaccgcctcccgttcc 395 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 28446511 gcccgcgcctccgc---ctccgcctcggcctcctcccgttcc 28446549
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccaaagcaagggcctttgcc 153 |||||||||||||||||||| Sbjct: 10783 ccaaagcaagggcctttgcc 10802
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 cctccgcggcctccgcctcg 380 |||||||||||||||||||| Sbjct: 141995 cctccgcggcctccgcctcg 142014
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 67308 gcgccggcggacggggtggc 67327
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 cggcctccgcctcgaccgcctccc 390 ||||||||||||||||||| |||| Sbjct: 6905055 cggcctccgcctcgaccgcgtccc 6905078
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ccgcggcctccgcctcgacc 383 |||||||||||||||||||| Sbjct: 2259898 ccgcggcctccgcctcgacc 2259879
>gb|AF388182.1| Rhodococcus sp. Q15 putative transporter, alkane-1-monooxygenase (alkB2), rubredoxin 3 (rubA3), rubredoxin 4 (rubA4), and putative regulator genes, complete cds Length = 4145 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 298 catcctgctccccatcctcggcgtcctcttcg 329 |||||||||||| ||||||| |||| |||||| Sbjct: 1919 catcctgctcccgatcctcgacgtcttcttcg 1950
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 41341 gcgccggcggacggggtggc 41322
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 159737 gcgccggcggacggggtggc 159718
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 14880 gcgccggcggacggggtggc 14899
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cttcgcctacctgctctacc 344 |||||||||||||||||||| Sbjct: 70630 cttcgcctacctgctctacc 70649
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atggcgccggcgccggcgga 252 |||||||||||||||||||| Sbjct: 52308 atggcgccggcgccggcgga 52289
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_E08 Length = 119926 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cttcgcctacctgctctacc 344 |||||||||||||||||||| Sbjct: 7524 cttcgcctacctgctctacc 7543
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 86740 ggcgccggcgccggcggacg 86759
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 catggcgccggcgccggcgg 251 |||||||||||||||||||| Sbjct: 38769 catggcgccggcgccggcgg 38750
>dbj|AK109058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E12, full insert sequence Length = 1621 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atggcgccggcgccggcgga 252 |||||||||||||||||||| Sbjct: 1042 atggcgccggcgccggcgga 1023
>ref|XM_308050.2| Anopheles gambiae str. PEST ENSANGP00000019435 (ENSANGG00000016946), partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tcctcggcgtcctcttcgcc 331 |||||||||||||||||||| Sbjct: 128 tcctcggcgtcctcttcgcc 109
>dbj|AK103076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118E02, full insert sequence Length = 1068 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tggcgccggcgccggcggacgggg 257 |||||||||||||||||| ||||| Sbjct: 223 tggcgccggcgccggcggccgggg 246
>ref|NM_211106.1| Eremothecium gossypii AFR205Cp (AFR205C), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 159 ggcgccggcgccggcggacg 178
>dbj|AK068443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153J23, full insert sequence Length = 772 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgccggcggacg 254 |||||||||||||||||||| Sbjct: 273 ggcgccggcgccggcggacg 254
>gb|BC048157.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:61327 IMAGE:5697941), complete cds Length = 4299 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 47 gcctccgcggcctccgcctc 28
>dbj|AK063102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C10, full insert sequence Length = 838 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 catggcgccggcgccggcgg 251 |||||||||||||||||||| Sbjct: 668 catggcgccggcgccggcgg 649
>emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395L14. Contains (part of) up to six novel genes or pseudogenes, the gene for a novel forkhead protein similar to FOXD4 (forkhead box D4, FREAC5), the gene for a novel phosphoglucomutase like protein, a pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His) box (S.cerevisiae CHL1-like helicase), an RPL23A (60S ribosomal protein L23A) pseudogene, the RABL2A gene for RAB-like 2A, the gene for a novel protein similar to small nuclear ribonucleoprotein polypeptide A' (SNRPA1) and the 3' part of the gene for a novel protein similar to acrosin (ACR). Contains ESTs, STSs, GSSs and nine putative CpG islands, complete sequence Length = 176734 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 ccgctacctccgcccgcgcctccg 366 |||| ||||||||||||||||||| Sbjct: 89702 ccgccacctccgcccgcgcctccg 89679
>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene cluster, complete sequence Length = 37948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tccgcggcctccgcctcgac 382 |||||||||||||||||||| Sbjct: 16004 tccgcggcctccgcctcgac 16023
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gcgccggcggacggggtggc 261 |||||||||||||||||||| Sbjct: 7420583 gcgccggcggacggggtggc 7420602
>ref|NM_025788.2| Mus musculus BTB (POZ) domain containing 14B (Btbd14b), mRNA Length = 4299 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 47 gcctccgcggcctccgcctc 28
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcccgcgcctccgcggcc 371 |||||||||||||||||||| Sbjct: 3504261 ccgcccgcgcctccgcggcc 3504280 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 ctccgcctcgaccgcctcccgttccgcg 398 ||||||||||||| |||||||| ||||| Sbjct: 1925301 ctccgcctcgacctcctcccgtgccgcg 1925328
>emb|X87543.1|HSNLM36S H.sapiens genomic DNA (chromosome 3; clone NLM36S) Length = 435 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 129 gcctccgcggcctccgcctc 110
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 158155 gcctccgcggcctccgcctc 158174
>emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on chromosome 4, complete sequence Length = 64760 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcctccgcggcctccgcctc 379 |||||||||||||||||||| Sbjct: 50606 gcctccgcggcctccgcctc 50587 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,876,919 Number of Sequences: 3902068 Number of extensions: 2876919 Number of successful extensions: 75568 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 72753 Number of HSP's gapped (non-prelim): 2815 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)