ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56a03 |
|---|---|
| Clone Library Name | barley_pub |
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 31.2 bits (69), Expect = 0.64 Identities = 25/92 (27%), Positives = 36/92 (39%) Frame = +1 Query: 22 SPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPLMSPPAA 201 +P +T A + SSS+ S +S+S+ ++++ P SPP Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSS-----------SPPPASPPASSPPRV 125 Query: 202 AGLDPGTGVESKDVQLGDYSARLYLPPAAGKG 297 L DV YSARL LP G G Sbjct: 126 LELPGVPAAAFSDVLNFIYSARLALPGGGGDG 157
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 19 RSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERP 180 RSP + + ++SSS+ +S +S+S++NT + D A D R +S V P Sbjct: 267 RSPSGSGSRSRSSSSDSIS-SSSSSSNTDSSDSSSTASDDSPARSVQSAAVPAP 319
>LIPS_PIG (Q68J42) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 764 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 278 PRPQA--RASSL*FYVHGGGFVAESVAS 355 PRPQ R+ SL ++HGGGFVA++ S Sbjct: 334 PRPQQAPRSRSLVVHIHGGGFVAQTSKS 361
>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)| (NY-REN-62 antigen) Length = 1674 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +1 Query: 22 SPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPLMSP-PA 198 SP S+P + + V + + S NT+ DK D + V++S R R +++P PA Sbjct: 1271 SPPSSPPSRPRNELNVFNRLTVSQGNTSVQQDKSDESDSSLSEVHRSSR--RGIINPFPA 1328 Query: 199 AAGL 210 + G+ Sbjct: 1329 SKGI 1332
>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1068 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 278 PRPQA--RASSL*FYVHGGGFVAESVAS 355 PRPQ R+ +L ++HGGGFVA++ S Sbjct: 633 PRPQQAPRSRALVVHIHGGGFVAQTSKS 660
>SGK2_HUMAN (Q9HBY8) Serine/threonine-protein kinase Sgk2 (EC 2.7.11.1)| (Serum/glucocorticoid-regulated kinase 2) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +1 Query: 1 HKYSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADD 114 H Y + SP TP+ S +NG +++ ++N N D Sbjct: 57 HCYRMNSSPAGTPSPQPSRANGNINLGPSANPNAQPTD 94
>KAD_PSESM (Q886R8) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 215 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +1 Query: 106 ADDDKEVAHDYGIVRVYK-SGRVERPLMSPPAAAGLDPGTG---VESKD 240 A DD+E+ RV++ SGR+ + +PP G+D TG V+ KD Sbjct: 110 AVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGVDDVTGESLVQRKD 158
>LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1076 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = +2 Query: 278 PRPQA--RASSL*FYVHGGGFVAESVAS 355 PRPQ R+ SL + HGGGFVA++ S Sbjct: 635 PRPQQAPRSRSLIVHFHGGGFVAQTSRS 662
>CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1| Length = 492 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +1 Query: 13 RHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDK 120 +HR R P + +++NG S +SNS+ N D ++ Sbjct: 101 QHRPSRPIPIASDNNNNGSTSSSSNSSNNNNNDANR 136
>ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (ATP-binding| cassette transporter 2) (ATP-binding cassette 2) Length = 2434 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +1 Query: 4 KYSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPL 183 +Y+ R P+ P + + + V +AS D D ++ + +VYKS ++ R L Sbjct: 2011 QYNFLRQPQRLPVSTKPVEDDV-DVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRIL 2069 Query: 184 MSPPAAAGLDPG 219 G+ PG Sbjct: 2070 AVDRLCLGVRPG 2081
>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding| cassette transporter 2) (ATP-binding cassette 2) Length = 2434 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +1 Query: 4 KYSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPL 183 +Y+ R P+ P + + + V +AS D D ++ + +VYKS ++ R L Sbjct: 2011 QYNFLRQPQRLPVSTKPVEDDV-DVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRIL 2069 Query: 184 MSPPAAAGLDPG 219 G+ PG Sbjct: 2070 AVDRLCLGVRPG 2081
>LIPS_SPETR (Q9R101) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 763 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = +2 Query: 278 PRPQ--ARASSL*FYVHGGGFVAESVAS 355 PRPQ +R+ SL HGGGFVA++ S Sbjct: 334 PRPQQTSRSRSLVVXFHGGGFVAQTSKS 361
>AES_ECOLI (P23872) Acetyl esterase (EC 3.1.1.-)| Length = 319 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 275 CPRPQARASSL*FYVHGGGFV 337 CP+P + A+ FY+HGGGF+ Sbjct: 78 CPQPDSPATL--FYLHGGGFI 96
>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad| development protein 2) Length = 2032 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/53 (24%), Positives = 31/53 (58%) Frame = +1 Query: 10 SRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGR 168 + H++ + +++ SSS+ S +S+ +++ DDD+ AH++ R K+ + Sbjct: 1121 AEHQNDMNYSSSSSSSSSSSSSSSSSDSSSFEDDDDENNAHNHDQKRTRKTSQ 1173
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Frame = +1 Query: 31 STPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKS-GRVERPLMSPPAAAG 207 +T ATA SS++ S++S+S++++++ + + D Y+S R +R PP A Sbjct: 330 TTAATASSSASSS-SLSSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTSYPPRRAT 388 Query: 208 LD--PGTGVESKDVQLGDYSARLYLPP 282 + PG + S YLPP Sbjct: 389 REEPPGAPFAENTAERFPPSYTSYLPP 415
>ABRU_DROME (Q24174) Protein abrupt (Protein clueless)| Length = 904 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = +1 Query: 1 HKYSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERP 180 +K S + SP T A +SSN SNSN ++++ ++ + G + + P Sbjct: 238 NKISSYLSPNQTSAACNNSSN------SNSNNHSSSHNNSSSNNISGSLNSSLNSPFSAP 291 Query: 181 LMSPPAAA 204 + PP A Sbjct: 292 QIPPPVTA 299
>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A| (Retinoblastoma-binding protein 2) (RBBP-2) Length = 1722 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 37 PATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPLMSPPAAAGLDP 216 P+ QS+ N VVS S+S T DD+E D I Y G + S +++ L+P Sbjct: 1314 PSFQQSAFNRVVSSVSSSPRQTMDYDDEETDSDEDIRETY--GYDMKDTASVKSSSSLEP 1371
>YNH8_YEAST (P53939) Hypothetical 45.9 kDa protein in TPM1-MKS1 intergenic| region Length = 407 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 9/41 (21%) Frame = +1 Query: 40 ATAQSSSNGVVSMASNSNTNTAAD---------DDKEVAHD 135 +T+ S+SN + +NSNTN+ +D DD + HD Sbjct: 39 STSNSNSNSNTNSNTNSNTNSNSDTKIPIVQISDDSHITHD 79
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 4/46 (8%) Frame = +1 Query: 4 KYSRHRSP----RSTPATAQSSSNGVVSMASNSNTNTAADDDKEVA 129 KY R P R TPA++ SSS+ S +S+S++++++D D V+ Sbjct: 1306 KYVPQRKPQTSRRHTPASSSSSSS---SSSSSSSSSSSSDSDMTVS 1348
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 76 MASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPLMSPPAAAGLD 213 +ASN+ + A+D+ E D I +Y L++PP A +D Sbjct: 309 VASNALCDAASDEVGESLADIDIYNIYAPNCQSEKLVTPPIAPSID 354
>SYL_RHILO (Q98EU7) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 875 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +1 Query: 37 PATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPLMSPPAAAGLDP 216 PA A S G V A++ +D +++ + I R+Y+ V ++ A DP Sbjct: 701 PAAADSGEAGAVRKATHKILKAVGEDIEKLGFNRAIARIYELANVLTTPLNQVAEGKADP 760
>KAD_PSEAE (Q9HXV4) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 215 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Frame = +1 Query: 25 PRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYK-SGRVERPLMSPPAA 201 PR+ P GV + A DD+E+ RV+ SGRV +PP Sbjct: 87 PRTIPQAEALKDAGVTI----DHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKV 142 Query: 202 AGLDPGTGVE 231 AG D TG E Sbjct: 143 AGKDDVTGEE 152
>ORC2_DROME (Q24168) Origin recognition complex subunit 2 (DmORC2)| Length = 618 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 37 PATAQSSSNGVVSMASNSNTNTAADDD 117 P+ +SSS+ S A NS+ N AADD+ Sbjct: 213 PSDEESSSSSSSSDAGNSSDNDAADDE 239
>LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 759 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = +2 Query: 278 PRPQA--RASSL*FYVHGGGFVAESVAS 355 PRP R+ +L ++HGGGFVA++ S Sbjct: 333 PRPHQAPRSRALVVHIHGGGFVAQTSKS 360
>TOP2A_PIG (O46374) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase| II, alpha isozyme) Length = 1533 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = +1 Query: 4 KYSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVRVYKSGRVERPL 183 K R R P ST + S+ ++S A S DD + D + KSGR ++P+ Sbjct: 1463 KGRRKRKP-STSDDSDSNFEKMISKAVTSKKPKGESDDFHLDLDLAVASRAKSGRTKKPI 1521
>TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) (PKU-beta) Length = 766 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 251 PSWTSLDSTPVPGSRPAA 198 PSW+ L ++P PGS AA Sbjct: 14 PSWSQLSTSPTPGSAAAA 31
>GLUQ_IDILO (Q5QVQ6) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 283 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +1 Query: 7 YSRHRSPRSTPATAQSSSNGVVSMASNSNTNTAADDDKEVAHDYGIVR 150 Y R+R PRSTP + +N V ++ D V+ D+ + R Sbjct: 114 YCRNRQPRSTPYALRFINNNPVDTFNDRAHGLLEDHSASVSEDFVLKR 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.307 0.125 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,282,987 Number of Sequences: 219361 Number of extensions: 509231 Number of successful extensions: 1913 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1909 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)
