ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466311.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
3dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
4dbj|AK105793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
5gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence 62 1e-06
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
7dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
8gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 42 1.3
9ref|XM_641755.1| Dictyostelium discoideum hypothetical protein (... 42 1.3
10ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (... 42 1.3
11ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (... 42 1.3
12ref|XM_636081.1| Dictyostelium discoideum dynactin 150 kDa subun... 42 1.3
13ref|XM_635126.1| Dictyostelium discoideum hypothetical protein (... 42 1.3
14ref|XM_482924.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
15gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 42 1.3
16ref|XM_879641.1| PREDICTED: Bos taurus hypothetical protein LOC6... 42 1.3
17emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster fo... 42 1.3
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
20gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 42 1.3
21dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
23dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24dbj|AK109407.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
25dbj|AK109351.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
26dbj|AK098967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
27dbj|AK070299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
28emb|BX890548.9| Zebrafish DNA sequence from clone CH211-238E22 i... 42 1.3
29ref|XM_641233.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
30ref|XM_640759.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
31ref|XM_638837.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
32ref|XM_630257.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
33ref|XM_633911.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
34gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
35gb|AC116500.13| Mus musculus chromosome 5, clone RP24-297N9, com... 40 5.0
36gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, com... 40 5.0
37gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, co... 40 5.0
38gb|AC109501.21| Mus musculus chromosome 17, clone RP23-449E17, c... 40 5.0
39ref|XM_662640.1| Cryptosporidium hominis TU502 hypothetical prot... 40 5.0
40gb|AY907537.1| Uncultured bacterial symbiont of Discodermia diss... 40 5.0
41gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosom... 40 5.0
42dbj|BS000599.1| Pan troglodytes chromosome Y clone:PTB-225K16, c... 40 5.0
43gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 5.0
44gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.0
45dbj|AK160195.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 40 5.0
46gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.0
47tpg|BK001655.1| TPA: TPA_inf: Drosophila pseudoobscura troponin ... 40 5.0
48dbj|AK004687.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 5.0
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
50gb|AC004616.1| Homo sapiens X BAC GSHB-536K7 (Genome Systems Hum... 40 5.0
51gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 5.0
52gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complet... 40 5.0
53gb|AC011302.3|AC011302 Homo sapiens BAC clone RP11-333E9 from Y,... 40 5.0
54ref|XM_345406.2| PREDICTED: Rattus norvegicus similar to hypothe... 40 5.0
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.0
56gb|AC120123.19| Mus musculus chromosome 7, clone RP23-152B12, co... 40 5.0 
>ref|XM_466311.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1251

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 219 caccggcgtcgagtccaaggacgtccagctcggggactactccgcccgcctctacctgcc 278
           |||||||||| | |||  ||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 264 caccggcgtccactcccgggacgtccacctcggcgactactccgcgcgcctctacctgcc 323



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 312 tctacgtccacgggggcggcttcgtggcggagtccgtcgcgtcccc 357
           ||||||| ||||| ||||| ||||||||||||||||  ||||||||
Sbjct: 362 tctacgtgcacggcggcgggttcgtggcggagtccgcggcgtcccc 407
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 219      caccggcgtcgagtccaaggacgtccagctcggggactactccgcccgcctctacctgcc 278
                |||||||||| | |||  ||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 21607423 caccggcgtccactcccgggacgtccacctcggcgactactccgcgcgcctctacctgcc 21607482



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 312      tctacgtccacgggggcggcttcgtggcggagtccgtcgcgtcccc 357
                ||||||| ||||| ||||| ||||||||||||||||  ||||||||
Sbjct: 21607521 tctacgtgcacggcggcgggttcgtggcggagtccgcggcgtcccc 21607566
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 219   caccggcgtcgagtccaaggacgtccagctcggggactactccgcccgcctctacctgcc 278
             |||||||||| | |||  ||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 96373 caccggcgtccactcccgggacgtccacctcggcgactactccgcgcgcctctacctgcc 96432



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 312   tctacgtccacgggggcggcttcgtggcggagtccgtcgcgtcccc 357
             ||||||| ||||| ||||| ||||||||||||||||  ||||||||
Sbjct: 96471 tctacgtgcacggcggcgggttcgtggcggagtccgcggcgtcccc 96516
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>dbj|AK105793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H09, full
           insert sequence
          Length = 1251

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 219 caccggcgtcgagtccaaggacgtccagctcggggactactccgcccgcctctacctgcc 278
           |||||||||| | |||  ||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 264 caccggcgtccactcccgggacgtccacctcggcgactactccgcgcgcctctacctgcc 323



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 312 tctacgtccacgggggcggcttcgtggcggagtccgtcgcgtcccc 357
           ||||||| ||||| ||||| ||||||||||||||||  ||||||||
Sbjct: 362 tctacgtgcacggcggcgggttcgtggcggagtccgcggcgtcccc 407
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>gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence
          Length = 1271

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 223 ggcgtcgagtccaaggacgtccagctcggggactactccgcccgcctctacctgccccc 281
           |||||| |||||||||||||||| |||||   ||||||||| || ||||||||||||||
Sbjct: 219 ggcgtccagtccaaggacgtccacctcggctcctactccgcgcggctctacctgccccc 277



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 314 tacgtccacgggggcggcttcgtggcggagtccgtcgcgtcccccaacggccaccgcttc 373
           ||||||||||| |||||||||||||| ||||||| ||| || ||||||  ||||| ||||
Sbjct: 315 tacgtccacggcggcggcttcgtggccgagtccgccgcctcgcccaactaccacctcttc 374

             
Query: 374 ct 375
           ||
Sbjct: 375 ct 376
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 154      tacaagagcggccgcgtcgagcg 176
                |||||||||||||||||||||||
Sbjct: 17417920 tacaagagcggccgcgtcgagcg 17417942
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 154    tacaagagcggccgcgtcgagcg 176
              |||||||||||||||||||||||
Sbjct: 141833 tacaagagcggccgcgtcgagcg 141855
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      caccgcagccgacgacgacaa 119
               |||||||||||||||||||||
Sbjct: 1690396 caccgcagccgacgacgacaa 1690376
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>ref|XM_641755.1| Dictyostelium discoideum hypothetical protein (DDB0189933), partial
            mRNA
          Length = 6945

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   tccaactccaacaccaacacc 102
            |||||||||||||||||||||
Sbjct: 1755 tccaactccaacaccaacacc 1775
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>ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (DDB0168059), partial
            mRNA
          Length = 6147

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   tccaactccaacaccaacacc 102
            |||||||||||||||||||||
Sbjct: 1149 tccaactccaacaccaacacc 1169
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>ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (DDB0217329), partial
            mRNA
          Length = 6147

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   tccaactccaacaccaacacc 102
            |||||||||||||||||||||
Sbjct: 1149 tccaactccaacaccaacacc 1169
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>ref|XM_636081.1| Dictyostelium discoideum dynactin 150 kDa subunit (DDB0220487),
           partial mRNA
          Length = 4620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  tccaactccaacaccaacacc 102
           |||||||||||||||||||||
Sbjct: 819 tccaactccaacaccaacacc 839
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>ref|XM_635126.1| Dictyostelium discoideum hypothetical protein (DDB0218405), partial
            mRNA
          Length = 2475

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   tccaactccaacaccaacacc 102
            |||||||||||||||||||||
Sbjct: 2387 tccaactccaacaccaacacc 2407
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>ref|XM_482924.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tctacaagagcggccgcgtcg 172
           |||||||||||||||||||||
Sbjct: 110 tctacaagagcggccgcgtcg 130
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      caccgcagccgacgacgacaa 119
               |||||||||||||||||||||
Sbjct: 1691241 caccgcagccgacgacgacaa 1691221
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>ref|XM_879641.1| PREDICTED: Bos taurus hypothetical protein LOC615326 (LOC615326),
           mRNA
          Length = 1044

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 186 gtctcctcccgcggcggccggcctg 210
           ||||||||||||||| |||||||||
Sbjct: 645 gtctcctcccgcggccgccggcctg 669
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>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis
          Length = 74787

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ccgcggcggccggcctggacc 214
            |||||||||||||||||||||
Sbjct: 6355 ccgcggcggccggcctggacc 6335
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 152      tctacaagagcggccgcgtcg 172
                |||||||||||||||||||||
Sbjct: 23396769 tctacaagagcggccgcgtcg 23396749
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 211     gaccccggcaccggcgtcgagtccaaggacgtc 243
               ||||||| ||||||||||  |||||||||||||
Sbjct: 5846633 gaccccgccaccggcgtcacgtccaaggacgtc 5846665



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 153     ctacaagagcggccgcgtcgagcg 176
               ||||||| ||||||||||||||||
Sbjct: 5846575 ctacaagggcggccgcgtcgagcg 5846598
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>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     tccaactccaacaccaacacc 102
              |||||||||||||||||||||
Sbjct: 306686 tccaactccaacaccaacacc 306706
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>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   tctacaagagcggccgcgtcg 172
             |||||||||||||||||||||
Sbjct: 78606 tctacaagagcggccgcgtcg 78586
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>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 211    gaccccggcaccggcgtcgagtccaaggacgtc 243
              ||||||| ||||||||||  |||||||||||||
Sbjct: 162162 gaccccgccaccggcgtcacgtccaaggacgtc 162194



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 153    ctacaagagcggccgcgtcgagcg 176
              ||||||| ||||||||||||||||
Sbjct: 162104 ctacaagggcggccgcgtcgagcg 162127
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 211   gaccccggcaccggcgtcgagtccaaggacgtc 243
             ||||||| ||||||||||  |||||||||||||
Sbjct: 47408 gaccccgccaccggcgtcacgtccaaggacgtc 47440



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   ctacaagagcggccgcgtcgagcg 176
             ||||||| ||||||||||||||||
Sbjct: 47350 ctacaagggcggccgcgtcgagcg 47373
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>dbj|AK109407.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C01, full
           insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 211 gaccccggcaccggcgtcgagtccaaggacgtc 243
           ||||||| ||||||||||  |||||||||||||
Sbjct: 207 gaccccgccaccggcgtcacgtccaaggacgtc 239



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ctacaagagcggccgcgtcgagcg 176
           ||||||| ||||||||||||||||
Sbjct: 149 ctacaagggcggccgcgtcgagcg 172
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>dbj|AK109351.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G08, full
           insert sequence
          Length = 1265

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 211 gaccccggcaccggcgtcgagtccaaggacgtc 243
           ||||||| ||||||||||  |||||||||||||
Sbjct: 202 gaccccgccaccggcgtcacgtccaaggacgtc 234



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ctacaagagcggccgcgtcgagcg 176
           ||||||| ||||||||||||||||
Sbjct: 144 ctacaagggcggccgcgtcgagcg 167
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>dbj|AK098967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084E12, full
           insert sequence
          Length = 1264

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 211 gaccccggcaccggcgtcgagtccaaggacgtc 243
           ||||||| ||||||||||  |||||||||||||
Sbjct: 205 gaccccgccaccggcgtcacgtccaaggacgtc 237



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ctacaagagcggccgcgtcgagcg 176
           ||||||| ||||||||||||||||
Sbjct: 147 ctacaagggcggccgcgtcgagcg 170
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>dbj|AK070299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F19, full
           insert sequence
          Length = 1315

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 211 gaccccggcaccggcgtcgagtccaaggacgtc 243
           ||||||| ||||||||||  |||||||||||||
Sbjct: 256 gaccccgccaccggcgtcacgtccaaggacgtc 288



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ctacaagagcggccgcgtcgagcg 176
           ||||||| ||||||||||||||||
Sbjct: 198 ctacaagggcggccgcgtcgagcg 221
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>emb|BX890548.9| Zebrafish DNA sequence from clone CH211-238E22 in linkage group 4,
             complete sequence
          Length = 155985

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   tgtgattctacgtccacgggg 326
             |||||||||||||||||||||
Sbjct: 44887 tgtgattctacgtccacgggg 44867
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>ref|XM_641233.1| Dictyostelium discoideum hypothetical protein (DDB0190597), partial
           mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ccaactccaacaccaacacc 102
           ||||||||||||||||||||
Sbjct: 445 ccaactccaacaccaacacc 464
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>ref|XM_640759.1| Dictyostelium discoideum hypothetical protein (DDB0190154), partial
           mRNA
          Length = 1164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ccaactccaacaccaacacc 102
           ||||||||||||||||||||
Sbjct: 379 ccaactccaacaccaacacc 398
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>ref|XM_638837.1| Dictyostelium discoideum hypothetical protein (DDB0217482), partial
            mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tccaactccaacaccaacac 101
            ||||||||||||||||||||
Sbjct: 1416 tccaactccaacaccaacac 1435
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>ref|XM_630257.1| Dictyostelium discoideum hypothetical protein (DDB0189251), partial
            mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ccaactccaacaccaacacc 102
            ||||||||||||||||||||
Sbjct: 1714 ccaactccaacaccaacacc 1733
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>ref|XM_633911.1| Dictyostelium discoideum hypothetical protein (DDB0185553), partial
           mRNA
          Length = 2850

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ccaactccaacaccaacacc 102
           ||||||||||||||||||||
Sbjct: 199 ccaactccaacaccaacacc 218
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>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0009N21, complete sequence
          Length = 164925

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  ccgcagccgacgacgacaag 120
            ||||||||||||||||||||
Sbjct: 8884 ccgcagccgacgacgacaag 8865
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>gb|AC116500.13| Mus musculus chromosome 5, clone RP24-297N9, complete sequence
          Length = 177689

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    ccaactccaacaccaacaccgcag 106
             ||||| ||||||||||||||||||
Sbjct: 56459 ccaacaccaacaccaacaccgcag 56482
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>gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, complete sequence
          Length = 168027

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gcaagctccctgtgattcta 315
             ||||||||||||||||||||
Sbjct: 13951 gcaagctccctgtgattcta 13970
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>gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, complete sequence
          Length = 173078

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gcaagctccctgtgattcta 315
              ||||||||||||||||||||
Sbjct: 164307 gcaagctccctgtgattcta 164326
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>gb|AC109501.21| Mus musculus chromosome 17, clone RP23-449E17, complete sequence
          Length = 187144

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cacagcccagagcagcagca 61
              ||||||||||||||||||||
Sbjct: 176482 cacagcccagagcagcagca 176501
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>ref|XM_662640.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10070)
            partial mRNA
          Length = 7941

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ccaactccaacaccaacacc 102
            ||||||||||||||||||||
Sbjct: 7582 ccaactccaacaccaacacc 7601
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>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide
             synthesis gene cluster, partial sequence
          Length = 124311

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   cgtggcggagtccgtcgcgt 353
             ||||||||||||||||||||
Sbjct: 21356 cgtggcggagtccgtcgcgt 21375
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>gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosome 17, complete sequence
          Length = 206481

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cacagcccagagcagcagca 61
              ||||||||||||||||||||
Sbjct: 107703 cacagcccagagcagcagca 107722
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>dbj|BS000599.1| Pan troglodytes chromosome Y clone:PTB-225K16, complete sequences
          Length = 105000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gcaagctccctgtgattcta 315
             ||||||||||||||||||||
Sbjct: 57373 gcaagctccctgtgattcta 57392
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 296      gcaagctccctgtgattcta 315
                ||||||||||||||||||||
Sbjct: 22369232 gcaagctccctgtgattcta 22369213
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ccaactccaacaccaacacc 102
              ||||||||||||||||||||
Sbjct: 112817 ccaactccaacaccaacacc 112836
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>dbj|AK160195.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510005J23 product:peroxisome biogenesis
           factor 7, full insert sequence
          Length = 1852

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 ggcgcacgactacggcatcg 145
           ||||||||||||||||||||
Sbjct: 157 ggcgcacgactacggcatcg 176
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 207     cctggaccccggcaccggcgtcgagtcc 234
               ||||| |||||||||| |||||||||||
Sbjct: 5412198 cctggcccccggcacctgcgtcgagtcc 5412171
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>tpg|BK001655.1| TPA: TPA_inf: Drosophila pseudoobscura troponin I (TpnI) gene,
            complete cds, alternatively spliced
          Length = 12917

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ccaactccaacaccaacacc 102
            ||||||||||||||||||||
Sbjct: 4723 ccaactccaacaccaacacc 4742
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>dbj|AK004687.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200010C05 product:peroxisome biogenesis
           factor 7, full insert sequence
          Length = 1441

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 ggcgcacgactacggcatcg 145
           ||||||||||||||||||||
Sbjct: 179 ggcgcacgactacggcatcg 198
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 101     ccgcagccgacgacgacaag 120
               ||||||||||||||||||||
Sbjct: 9132229 ccgcagccgacgacgacaag 9132210
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>gb|AC004616.1| Homo sapiens X BAC GSHB-536K7 (Genome Systems Human BAC library)
             complete sequence
          Length = 149752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gcaagctccctgtgattcta 315
             ||||||||||||||||||||
Sbjct: 39044 gcaagctccctgtgattcta 39025
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tccaactccaacaccaacac 101
              ||||||||||||||||||||
Sbjct: 190486 tccaactccaacaccaacac 190505
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>gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complete sequence
          Length = 135506

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   ggcaagctccctgtgattct 314
             ||||||||||||||||||||
Sbjct: 29990 ggcaagctccctgtgattct 30009
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>gb|AC011302.3|AC011302 Homo sapiens BAC clone RP11-333E9 from Y, complete sequence
          Length = 178137

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gcaagctccctgtgattcta 315
             ||||||||||||||||||||
Sbjct: 68679 gcaagctccctgtgattcta 68698
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>ref|XM_345406.2| PREDICTED: Rattus norvegicus similar to hypothetical protein
            LOC143458 (predicted) (LOC366138), mRNA
          Length = 1240

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   cagccacagcccagagcagc 57
            ||||||||||||||||||||
Sbjct: 987  cagccacagcccagagcagc 1006
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     cggcctggaccccggcaccg 223
               ||||||||||||||||||||
Sbjct: 3027291 cggcctggaccccggcaccg 3027272
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>gb|AC120123.19| Mus musculus chromosome 7, clone RP23-152B12, complete sequence
          Length = 229054

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ccaacaccaacaccgcagcc 108
             ||||||||||||||||||||
Sbjct: 69629 ccaacaccaacaccgcagcc 69610


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,396,198
Number of Sequences: 3902068
Number of extensions: 2396198
Number of successful extensions: 53924
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53372
Number of HSP's gapped (non-prelim): 549
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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