ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast56a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110012.1| Zea mays CL907_1 mRNA sequence Length = 2928 Score = 141 bits (71), Expect = 2e-30 Identities = 80/83 (96%) Strand = Plus / Plus Query: 32 atggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacaag 91 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1735 atggagccgatcgtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacagg 1794 Query: 92 ctcctcaagccgcacttccggaa 114 ||||||||||||||||||||||| Sbjct: 1795 ctcctcaagccgcacttccggaa 1817 Score = 67.9 bits (34), Expect = 2e-08 Identities = 145/182 (79%) Strand = Plus / Plus Query: 201 acgaggtcaacttcttcgccagcaagtacggcatggagatgtcatccaaggcatacgctt 260 ||||||||| | |||| ||||||||||| |||||||||||| |||||||| ||| Sbjct: 1904 acgaggtcacgtacttccccagcaagtacaacatggagatgtcctccaaggcgtacaaag 1963 Query: 261 cctataacttcaccgagctcgctttccccaacgaactcatcaagcgaggcgtggcgagag 320 ||| |||||||| || || ||| | |||||||| ||||||||| |||| |||| | || Sbjct: 1964 cctggaacttcacggaccttgctcttcccaacgatctcatcaagagaggtctggcaaaag 2023 Query: 321 gcgacacgaagaagcatgaggagctggagctgctgataaaggactacccgtatgcggtgg 380 | || | ||||||| ||| | |||||||| |||||||||||||||||| ||||||| Sbjct: 2024 gagatccaaagaagccagagacggtggagctggcgataaaggactacccgtacgcggtgg 2083 Query: 381 ac 382 || Sbjct: 2084 ac 2085
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacaa 90 |||||||||| | ||||||||| |||||||||||||||||||| |||||| | ||||| Sbjct: 3645 gatggagccgttcgtgatcgcgacgaaccggcagctgagcgtgacgcacccggtgcacaa 3704 Query: 91 gctcct 96 |||||| Sbjct: 3705 gctcct 3710
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacaa 90 |||||||||| | ||||||||| |||||||||||||||||||| |||||| | ||||| Sbjct: 1578 gatggagccgttcgtgatcgcgacgaaccggcagctgagcgtgacgcacccggtgcacaa 1637 Query: 91 gctcct 96 |||||| Sbjct: 1638 gctcct 1643
>ref|XM_462649.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 63.9 bits (32), Expect = 4e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 7 ccactggctggggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagct 66 ||||||| || ||||||||||| ||||||||| | | ||||||||| |||||||| | Sbjct: 1674 ccactggttgaggacgcacgcgtgcatggagccgttcatcatcgcggcgcaccggcagat 1733 Query: 67 gagcgtgctgcacccaatccacaagctcctcaagccgcac 106 ||||| | ||||||| ||| |||||| |||||||||||| Sbjct: 1734 gagcgcgatgcaccccatcttcaagctgctcaagccgcac 1773
>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full insert sequence Length = 2282 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 7 ccactggctggggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagct 66 |||||||||| ||||||||||| |||||||| | | |||||||||| ||||||| Sbjct: 1054 ccactggctgttcacgcacgcgacagtggagccgttcatcatcgcggcgaggaggcagct 1113 Query: 67 gagcgtgctgcacccaatccacaagctcctcaagccgcacttc 109 ||||| | ||||||| |||||||||||||| | ||||||||| Sbjct: 1114 gagcgcgatgcacccgatccacaagctcctggacccgcacttc 1156
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 18 ggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgc 77 ||||||||||| ||||||||| | | ||||||||| |||||||| |||||| | ||| Sbjct: 22282617 ggacgcacgcgtgcatggagccgttcatcatcgcggcgcaccggcagatgagcgcgatgc 22282676 Query: 78 acccaatccacaagctcctcaagccgcac 106 |||| ||| |||||| |||||||||||| Sbjct: 22282677 accccatcttcaagctgctcaagccgcac 22282705
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcct 96 ||||||||| |||||||||||||||||||| |||||| | ||||||||||| Sbjct: 1060 gtgatcgcgacgaaccggcagctgagcgtgacgcacccggtgcacaagctcct 1112
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 18 ggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgc 77 ||||||||||| ||||||||| | | ||||||||| |||||||| |||||| | ||| Sbjct: 33519 ggacgcacgcgtgcatggagccgttcatcatcgcggcgcaccggcagatgagcgcgatgc 33578 Query: 78 acccaatccacaagctcctcaagccgcac 106 |||| ||| |||||| |||||||||||| Sbjct: 33579 accccatcttcaagctgctcaagccgcac 33607
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 341 gagctggagctgctgataaaggactacccgta 372 ||||||||||||||||| |||||||||||||| Sbjct: 136747 gagctggagctgctgatcaaggactacccgta 136778 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 accggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcact 107 |||||||||| |||||| |||||| ||||||||||||||| | ||||||| Sbjct: 136499 accggcagctcagcgtggcgcaccctatccacaagctcctccacccgcact 136549
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 341 gagctggagctgctgataaaggactacccgta 372 ||||||||||||||||| |||||||||||||| Sbjct: 20829686 gagctggagctgctgatcaaggactacccgta 20829717 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 accggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcact 107 |||||||||| |||||| |||||| ||||||||||||||| | ||||||| Sbjct: 20829438 accggcagctcagcgtggcgcaccctatccacaagctcctccacccgcact 20829488
>dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M03, full insert sequence Length = 2930 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 341 gagctggagctgctgataaaggactacccgta 372 ||||||||||||||||| |||||||||||||| Sbjct: 1953 gagctggagctgctgatcaaggactacccgta 1984 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 accggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcact 107 |||||||||| |||||| |||||| ||||||||||||||| | ||||||| Sbjct: 1705 accggcagctcagcgtggcgcaccctatccacaagctcctccacccgcact 1755
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 341 gagctggagctgctgataaaggactacccgta 372 ||||||||||||||||| |||||||||||||| Sbjct: 1953 gagctggagctgctgatcaaggactacccgta 1984 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 accggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcact 107 |||||||||| |||||| |||||| ||||||||||||||| | ||||||| Sbjct: 1705 accggcagctcagcgtggcgcaccctatccacaagctcctccacccgcact 1755
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 341 gagctggagctgctgataaaggactacccgta 372 ||||||||||||||||| |||||||||||||| Sbjct: 21139921 gagctggagctgctgatcaaggactacccgta 21139952 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 accggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcact 107 |||||||||| |||||| |||||| ||||||||||||||| | ||||||| Sbjct: 21139673 accggcagctcagcgtggcgcaccctatccacaagctcctccacccgcact 21139723
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3198 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 1982 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 2041 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 2042 ttccggtacac 2052
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1421 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 1467 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 1705 gctgctgatcaaggactacccgtacgccgtggac 1738
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1900 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 1946 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 2184 gctgctgatcaaggactacccgtacgccgtggac 2217
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtg 73 |||||||||| | ||||||||| ||||||||||||| |||||| Sbjct: 1584 gatggagccgttcgtgatcgcgacgaaccggcagctcagcgtg 1626 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| |||| |||| Sbjct: 1872 gctgctgatcaaggactacccgtacgcggcggac 1905
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 64692 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 64738 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtg 73 |||||||||| | ||||||||| ||||||||||||| |||||| Sbjct: 46128 gatggagccgttcgtgatcgcgacgaaccggcagctcagcgtg 46170 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 65075 gctgctgatcaaggactacccgtacgccgtggac 65108 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| |||| |||| Sbjct: 46508 gctgctgatcaaggactacccgtacgcggcggac 46541
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 27820562 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 27820608 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtg 73 |||||||||| | ||||||||| ||||||||||||| |||||| Sbjct: 27801998 gatggagccgttcgtgatcgcgacgaaccggcagctcagcgtg 27802040 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 27820945 gctgctgatcaaggactacccgtacgccgtggac 27820978 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| |||| |||| Sbjct: 27802378 gctgctgatcaaggactacccgtacgcggcggac 27802411
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1894 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 1940 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 2178 gctgctgatcaaggactacccgtacgccgtggac 2211
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 25241580 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 25241639 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 25241640 ttccggtacac 25241650 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||||||||||||||||| |||| | ||||||| Sbjct: 25210449 atcgcggcgaaccggcagctcagcgagatgcaccc 25210415
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 27911886 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 27911932 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtg 73 |||||||||| | ||||||||| ||||||||||||| |||||| Sbjct: 27893322 gatggagccgttcgtgatcgcgacgaaccggcagctcagcgtg 27893364 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 27912269 gctgctgatcaaggactacccgtacgccgtggac 27912302 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| |||| |||| Sbjct: 27893702 gctgctgatcaaggactacccgtacgcggcggac 27893735
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtg 73 |||||||||| | ||||||||| ||||||||||||| |||||| Sbjct: 11895 gatggagccgttcgtgatcgcgacgaaccggcagctcagcgtg 11853 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Minus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| |||| |||| Sbjct: 11515 gctgctgatcaaggactacccgtacgcggcggac 11482
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 106703 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 106762 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 106763 ttccggtacac 106773 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||||||||||||||||| |||| | ||||||| Sbjct: 75572 atcgcggcgaaccggcagctcagcgagatgcaccc 75538
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 16765 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 16824 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 16825 ttccggtacac 16835
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 307 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 353 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 591 gctgctgatcaaggactacccgtacgccgtggac 624
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1572 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 1618 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 1856 gctgctgatcaaggactacccgtacgccgtggac 1889
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1901 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 1947 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 2185 gctgctgatcaaggactacccgtacgccgtggac 2218
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 35 gagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||| | ||||||||| ||||||||||||| |||||| ||||||| Sbjct: 472 gagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccc 518 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgtatgcggtggac 382 ||||||||| |||||||||||||| || |||||| Sbjct: 756 gctgctgatcaaggactacccgtacgccgtggac 789
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full insert sequence Length = 3196 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 1980 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 2039 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 2040 ttccggtacac 2050
>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full insert sequence Length = 3008 Score = 54.0 bits (27), Expect = 3e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 7 ccactggctggggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagct 66 |||||||||| ||||||||||| |||||||| | | |||||| ||| ||||||| Sbjct: 1755 ccactggctgttcacgcacgcgacagtggagccgttcatcatcgcgacgaggaggcagct 1814 Query: 67 gagcgtgctgcacccaatccacaagctcctcaagccgcacttc 109 ||||| | ||||||| |||||||||||||| | ||||||||| Sbjct: 1815 gagcgcgatgcacccgatccacaagctcctggacccgcacttc 1857
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds Length = 2232 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcac 106 |||||||||||||||||||| |||| | ||||||| ||| || |||| || | |||||| Sbjct: 1057 atcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcac 1116 Query: 107 ttccggaacac 117 |||||| |||| Sbjct: 1117 ttccggtacac 1127
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 60 ggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcacttc 109 |||||||||||| | ||||||| |||||||||||||| | ||||||||| Sbjct: 34541 ggcagctgagcgcgatgcacccgatccacaagctcctggacccgcacttc 34590
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01, complete sequence Length = 140322 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 60 ggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcacttc 109 |||||||||||| | ||||||| |||||||||||||| | ||||||||| Sbjct: 61314 ggcagctgagcgcgatgcacccgatccacaagctcctggacccgcacttc 61363
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 60 ggcagctgagcgtgctgcacccaatccacaagctcctcaagccgcacttc 109 |||||||||||| | ||||||| |||||||||||||| | ||||||||| Sbjct: 13605406 ggcagctgagcgcgatgcacccgatccacaagctcctggacccgcacttc 13605455
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Plus Query: 31 gatggagccggtggtgatcgcggcgaaccggcagctgagcgtgctgcacccaatccacaa 90 |||||||||| | |||||||| | ||||||||||| |||||| |||||| | ||||| Sbjct: 1605 gatggagccgttcgtgatcgccaccaaccggcagctcagcgtgacgcaccccgtgcacaa 1664 Query: 91 gctcctcaagccgcact 107 ||||||| |||||||| Sbjct: 1665 gctcctcctgccgcact 1681
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 350 ctgctgataaaggactacccgtatgcggtggac 382 |||||||| |||||||||||||| ||||||||| Sbjct: 2024 ctgctgatcaaggactacccgtacgcggtggac 2056
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 29 acgatggagccggtggtgatcgcg 52 |||||||||||||||||||||||| Sbjct: 246071 acgatggagccggtggtgatcgcg 246048
>emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxygenase-like protein (lox gene) Length = 3123 Score = 48.1 bits (24), Expect = 0.021 Identities = 81/100 (81%) Strand = Plus / Plus Query: 7 ccactggctggggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagct 66 |||||||||| ||||||||||| |||||||| | | ||||||||| ||||||| | Sbjct: 1874 ccactggctgaggacgcacgcgtgcatggagcccttcatcatcgcggcgcaccggcaaat 1933 Query: 67 gagcgtgctgcacccaatccacaagctcctcaagccgcac 106 ||||| ||||||| ||| |||||| |||||||||||| Sbjct: 1934 gagcgccatgcaccccatcttcaagctgctcaagccgcac 1973
>ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2775 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||||||||||||||||| |||| | ||||||| Sbjct: 1780 atcgcggcgaaccggcagctcagcgagatgcaccc 1814
>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene) Length = 3018 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 1809 gtgatcgcggcgaaccggcggctgagc 1835
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 22969138 gtgatcgcggcgaaccggcggctgagc 22969164 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 22889738 gtgatcgcggcgaaccggcggctgagc 22889712
>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full insert sequence Length = 3080 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 1828 gtgatcgcggcgaaccggcggctgagc 1854
>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full insert sequence Length = 2747 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 1335 gtgatcgcggcgaaccggcggctgagc 1361
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds Length = 2664 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||||||||||||||||| |||| | ||||||| Sbjct: 1465 atcgcggcgaaccggcagctcagcgagatgcaccc 1499
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for lipoxygenase, complete cds Length = 3007 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 atcgcggcgaaccggcagctgagcgtgctgcaccc 81 |||||||||||||||||||| |||| | ||||||| Sbjct: 1898 atcgcggcgaaccggcagctcagcgagatgcaccc 1932
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 22897329 gtgatcgcggcgaaccggcggctgagc 22897355 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 22817929 gtgatcgcggcgaaccggcggctgagc 22817903
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 78415 gtgatcgcggcgaaccggcggctgagc 78441
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 gtgatcgcggcgaaccggcagctgagc 70 ||||||||||||||||||| ||||||| Sbjct: 67106 gtgatcgcggcgaaccggcggctgagc 67132
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 323 gacacgaagaagcatgaggagctggagctgctg 355 |||| ||||||| ||||| |||||||||||||| Sbjct: 87437 gacaggaagaagaatgagaagctggagctgctg 87469
>ref|NM_053941.1| Rattus norvegicus protocadherin alpha 3 (Pcdha3), mRNA Length = 5226 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1564 catgaggagctggagctgctg 1584
>gb|BC085793.1| Rattus norvegicus protocadherin alpha 4, mRNA (cDNA clone MGC:93781 IMAGE:7109469), complete cds Length = 3819 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1664 catgaggagctggagctgctg 1684
>gb|BC082326.1| Mus musculus protocadherin alpha 1, mRNA (cDNA clone MGC:90628 IMAGE:30356350), complete cds Length = 4942 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1677 catgaggagctggagctgctg 1697
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 323 gacacgaagaagcatgaggagctggagctgctg 355 |||| ||||||| ||||| |||||||||||||| Sbjct: 24908 gacaggaagaagaatgagaagctggagctgctg 24876
>ref|NM_009960.1| Mus musculus protocadherin alpha 11 (Pcdha11), mRNA Length = 5254 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1570 catgaggagctggagctgctg 1590
>ref|NM_201243.1| Mus musculus protocadherin alpha 8 (Pcdha8), mRNA Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_007766.1| Mus musculus protocadherin alpha 4 (Pcdha4), mRNA Length = 5323 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1650 catgaggagctggagctgctg 1670
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 atggagccggtggtgatcgcg 52 ||||||||||||||||||||| Sbjct: 43911 atggagccggtggtgatcgcg 43931
>ref|XM_908963.2| PREDICTED: Mus musculus similar to protocadherin alpha 12 (LOC634282), mRNA Length = 2847 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|XM_908935.2| PREDICTED: Mus musculus similar to protocadherin alpha 10 (LOC634256), mRNA Length = 2587 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1727 catgaggagctggagctgctg 1747
>ref|XM_908918.1| PREDICTED: Mus musculus protocadherin alpha cluster (Pcdha@), mRNA Length = 2652 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>ref|XM_908824.2| PREDICTED: Mus musculus similar to protocadherin alpha 5 (LOC634174), mRNA Length = 2555 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|XM_908786.2| PREDICTED: Mus musculus similar to protocadherin alpha 3 (LOC634146), mRNA Length = 2510 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1683 catgaggagctggagctgctg 1703
>ref|XM_991056.1| PREDICTED: Mus musculus protocadherin alpha 6 (Pcdha6), mRNA Length = 2611 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1757 catgaggagctggagctgctg 1777
>ref|XM_908751.2| PREDICTED: Mus musculus similar to protocadherin alpha 1 (LOC634119), mRNA Length = 2564 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1692 catgaggagctggagctgctg 1712
>gb|AF539749.1| Rattus norvegicus protocadherin alpha 3 mRNA, partial cds, alternatively spliced Length = 2014 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1187 catgaggagctggagctgctg 1207
>gb|BC060211.1| Mus musculus protocadherin alpha 4, mRNA (cDNA clone MGC:64735 IMAGE:6838078), complete cds Length = 4166 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1664 catgaggagctggagctgctg 1684
>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene) Length = 3023 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcggcgaaccggcagctgagc 70 ||||||||||||||||||||| Sbjct: 1899 gcggcgaaccggcagctgagc 1919
>emb|AJ417975.1|CAV417975 Corylus avellana lox gene for lipoxygenase, exons 1-9 Length = 9887 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 ctgagcgtgctgcacccaatccacaagct 93 ||||||||||| |||||||| |||||||| Sbjct: 8236 ctgagcgtgcttcacccaattcacaagct 8264
>gb|AF464178.1| Mus musculus protocadherin gene, exon alpha 4 and partial cds Length = 3391 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 2065 catgaggagctggagctgctg 2085
>gb|AF464180.1| Mus musculus protocadherin mRNA, complete cds Length = 2856 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1598 catgaggagctggagctgctg 1618
>gb|BC030897.1| Mus musculus, protocadherin alpha 6, clone IMAGE:4502027, mRNA Length = 2891 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1686 catgaggagctggagctgctg 1706
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 atggagccggtggtgatcgcg 52 ||||||||||||||||||||| Sbjct: 390379 atggagccggtggtgatcgcg 390399
>dbj|AK141960.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130075J08 product:protocadherin alpha 11, full insert sequence Length = 3324 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1717 catgaggagctggagctgctg 1737
>dbj|AK139436.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830082M15 product:protocadherin alpha 11, full insert sequence Length = 4040 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1716 catgaggagctggagctgctg 1736
>dbj|AK139318.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830007O22 product:protocadherin alpha 11, full insert sequence Length = 4969 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1411 catgaggagctggagctgctg 1391
>dbj|AK149282.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930010F15 product:protocadherin alpha 4, full insert sequence Length = 2876 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1692 catgaggagctggagctgctg 1712
>ref|NM_054072.1| Mus musculus protocadherin alpha 1 (Pcdha1), mRNA Length = 5248 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>ref|NM_009959.1| Mus musculus protocadherin alpha 5 (Pcdha5), mRNA Length = 5206 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_009961.1| Mus musculus protocadherin alpha 10 (Pcdha10), mRNA Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>ref|NM_198117.1| Mus musculus protocadherin alpha 2 (Pcdha2), mRNA Length = 5248 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_138662.1| Mus musculus protocadherin alpha 3 (Pcdha3), mRNA Length = 5230 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1564 catgaggagctggagctgctg 1584
>ref|NM_138661.1| Mus musculus protocadherin alpha 9 (Pcdha9), mRNA Length = 5341 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>ref|NM_138663.2| Mus musculus protocadherin alpha 12 (Pcdha12), mRNA Length = 5254 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AK048980.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230087K19 product:protocadherin alpha 4, full insert sequence Length = 2894 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1681 catgaggagctggagctgctg 1701
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence Length = 218905 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 213647 catgaggagctggagctgctg 213667 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 206767 catgaggagctggagctgctg 206787 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 197737 catgaggagctggagctgctg 197757
>dbj|AK043705.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830022B16 product:protocadherin alpha 11, full insert sequence Length = 2878 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1678 catgaggagctggagctgctg 1698
>gb|AY013767.1| Mus musculus protocadherin alpha 9 mRNA, complete cds Length = 5341 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>gb|AY013766.1| Mus musculus protocadherin alpha 8 mRNA, complete cds Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY013763.1| Mus musculus protocadherin alpha 5 mRNA, complete cds Length = 5206 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY013762.1| Mus musculus protocadherin alpha 4 mRNA, complete cds Length = 5245 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY013761.1| Mus musculus protocadherin alpha 3 mRNA, complete cds Length = 5230 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1564 catgaggagctggagctgctg 1584
>gb|AY013760.1| Mus musculus protocadherin alpha 2 mRNA, complete cds Length = 5248 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY013759.1| Mus musculus protocadherin alpha 12 mRNA, complete cds Length = 5254 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY013758.1| Mus musculus protocadherin alpha 11 mRNA, complete cds Length = 5254 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1570 catgaggagctggagctgctg 1590
>gb|AY013757.1| Mus musculus protocadherin alpha 10 mRNA, complete cds Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>gb|AY013756.1| Mus musculus protocadherin alpha 1 mRNA, complete cds Length = 5248 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>ref|NM_199504.1| Rattus norvegicus protocadherin alpha 2 (Pcdha2), mRNA Length = 5244 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_199506.1| Rattus norvegicus protocadherin alpha 6 (Pcdha6), mRNA Length = 5289 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1624 catgaggagctggagctgctg 1644
>ref|NM_199507.1| Rattus norvegicus protocadherin alpha 7 (Pcdha7), mRNA Length = 5211 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_199486.2| Rattus norvegicus protocadherin alpha 11 (Pcdha11), mRNA Length = 5241 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>gb|AY573982.1| Rattus norvegicus protocadherin alpha 8 (Pcdha8) mRNA, complete cds Length = 5248 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573981.1| Rattus norvegicus protocadherin alpha 7 (Pcdha7) mRNA, complete cds Length = 5212 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573980.1| Rattus norvegicus protocadherin alpha 6 (Pcdha6) mRNA, complete cds Length = 5239 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573978.1| Rattus norvegicus protocadherin alpha 4 (Pcdha4) mRNA, complete cds Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573977.1| Rattus norvegicus protocadherin alpha 3 (Pcdha3) mRNA, complete cds Length = 5227 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1564 catgaggagctggagctgctg 1584
>gb|AY573976.1| Rattus norvegicus protocadherin alpha 2 (Pcdha2) mRNA, complete cds Length = 5245 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573975.1| Rattus norvegicus protocadherin alpha 13 (Pcdha13) mRNA, complete cds Length = 5251 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AY573974.1| Rattus norvegicus protocadherin alpha 12 (Pcdha12) mRNA, complete cds Length = 5251 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1570 catgaggagctggagctgctg 1590
>gb|AY573973.1| Rattus norvegicus protocadherin alpha 11 (Pcdha11) mRNA, complete cds Length = 5242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>gb|AY573972.1| Rattus norvegicus protocadherin alpha 10 (Pcdha10) mRNA, complete cds Length = 5338 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>ref|NM_053933.1| Rattus norvegicus protocadherin alpha 4 (Pcdha4), mRNA Length = 5241 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_053934.1| Rattus norvegicus protocadherin alpha 13 (Pcdha13), mRNA Length = 5250 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>ref|NM_053940.1| Rattus norvegicus protocadherin alpha 11 (Pcdha11), mRNA Length = 5250 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1570 catgaggagctggagctgctg 1590
>ref|NM_053939.1| Rattus norvegicus protocadherin alpha 10 (Pcdha10), mRNA Length = 5337 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>ref|NM_053942.1| Rattus norvegicus protocadherin alpha 8 (Pcdha8), mRNA Length = 5247 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence Length = 199704 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 173537 catgaggagctggagctgctg 173557 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 165863 catgaggagctggagctgctg 165883 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 159295 catgaggagctggagctgctg 159315 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 152415 catgaggagctggagctgctg 152435 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 143385 catgaggagctggagctgctg 143405
>gb|AC020972.3|AC020972 Mus musculus chromosome 18 clone RP23-6P18, complete sequence Length = 218100 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 213414 catgaggagctggagctgctg 213394 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 205740 catgaggagctggagctgctg 205720 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 178995 catgaggagctggagctgctg 178975 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 173713 catgaggagctggagctgctg 173693 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 168210 catgaggagctggagctgctg 168190 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 160857 catgaggagctggagctgctg 160837 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 155325 catgaggagctggagctgctg 155305 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 145950 catgaggagctggagctgctg 145930
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gatggagccggtggtgatcgc 51 ||||||||||||||||||||| Sbjct: 4418132 gatggagccggtggtgatcgc 4418112
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 87837 catgaggagctggagctgctg 87857 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 74308 catgaggagctggagctgctg 74328 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 68404 catgaggagctggagctgctg 68424 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 61491 catgaggagctggagctgctg 61511 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 49773 catgaggagctggagctgctg 49793 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 43844 catgaggagctggagctgctg 43864 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 37737 catgaggagctggagctgctg 37757 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 23295 catgaggagctggagctgctg 23315 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 16723 catgaggagctggagctgctg 16743 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 10559 catgaggagctggagctgctg 10579
>dbj|AB113396.1| Rattus norvegicus rCNRv13 mRNA for cadherin-related neuronal receptor 13, complete cds Length = 5250 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AB113395.1| Rattus norvegicus rCNRv12 mRNA for cadherin-related neuronal receptor 12, complete cds Length = 5250 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1570 catgaggagctggagctgctg 1590
>dbj|AB113394.1| Rattus norvegicus rCNRv11 mRNA for cadherin-related neuronal receptor 11, complete cds Length = 5241 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1576 catgaggagctggagctgctg 1596
>dbj|AB113393.1| Rattus norvegicus rCNRv10 mRNA for cadherin-related neuronal receptor 10, complete cds Length = 5337 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1663 catgaggagctggagctgctg 1683
>dbj|AB113391.1| Rattus norvegicus rCNRv08 mRNA for cadherin-related neuronal receptor 8, complete cds Length = 5247 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AB113390.1| Rattus norvegicus rCNRv07 mRNA for cadherin-related neuronal receptor 7, complete cds Length = 5211 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AB113389.1| Rattus norvegicus rCNRv06 mRNA for cadherin-related neuronal receptor 6, complete cds Length = 5289 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1624 catgaggagctggagctgctg 1644
>dbj|AB113387.1| Rattus norvegicus rCNRv04 mRNA for cadherin-related neuronal receptor 4, complete cds Length = 5241 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AB113386.1| Rattus norvegicus rCNRv03 mRNA for cadherin-related neuronal receptor 3, complete cds Length = 5226 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1564 catgaggagctggagctgctg 1584
>dbj|AB113385.1| Rattus norvegicus rCNRv02 mRNA for cadherin-related neuronal receptor 2, complete cds Length = 5244 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1573 catgaggagctggagctgctg 1593
>dbj|AK129120.1| Mus musculus mRNA for mKIAA0345 protein Length = 4568 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1666 catgaggagctggagctgctg 1686
>dbj|AB045586.1| Rattus norvegicus cnr5 mRNA for cadherin-related neuronal receptor 5, partial cds Length = 2131 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 851 catgaggagctggagctgctg 871
>dbj|AB045585.1| Rattus norvegicus cnr1 mRNA for cadherin-related neuronal receptor 1, partial cds Length = 1018 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 75 catgaggagctggagctgctg 95
>gb|BC079625.1| Mus musculus cDNA clone IMAGE:30536554, containing frame-shift errors Length = 4877 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1693 catgaggagctggagctgctg 1713
>dbj|D86916.1| Mus musculus mRNA for CNR1, complete cds Length = 5323 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1650 catgaggagctggagctgctg 1670
>dbj|AB008183.1| Mus musculus CNR8 mRNA for Cadherin-related neural recepter 8, partial cds Length = 2743 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1466 catgaggagctggagctgctg 1486
>dbj|AB008182.1| Mus musculus CNR7 mRNA for Cadherin-related neural recepter 7, partial cds Length = 2746 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1463 catgaggagctggagctgctg 1483
>dbj|AB008181.1| Mus musculus CNR6 mRNA for Cadherin-related neural recepter 6, partial cds Length = 2698 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1466 catgaggagctggagctgctg 1486
>dbj|AB008180.1| Mus musculus CNR5 mRNA for Cadherin-related neural recepter 5, partial cds Length = 2746 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1466 catgaggagctggagctgctg 1486
>dbj|AB008178.1| Mus musculus CNR3 mRNA for Cadherin-related neural recepter 3, partial cds Length = 2731 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catgaggagctggagctgctg 355 ||||||||||||||||||||| Sbjct: 1466 catgaggagctggagctgctg 1486
>gb|BC085473.1| Mus musculus cDNA clone IMAGE:6414100, partial cds Length = 1982 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 288 gaagaagaatgagaagctggagctgctg 315
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgcacgcgacgatggagccg 40 |||||||||||||||||||| Sbjct: 1434118 cgcacgcgacgatggagccg 1434137
>gb|AY724526.1| Rattus norvegicus clone UI-R-FJ0-cpz-p-10-0-UI unknown mRNA Length = 2189 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 498 gaagaagaatgagaagctggagctgctg 525
>gb|BC024816.1| Mus musculus suppressor of variegation 4-20 homolog 2 (Drosophila), mRNA (cDNA clone MGC:36471 IMAGE:5359433), complete cds Length = 2187 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 531 gaagaagaatgagaagctggagctgctg 558
>gb|AY555193.1| Mus musculus Suv4-20h2 mRNA, complete cds Length = 2203 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 546 gaagaagaatgagaagctggagctgctg 573
>gb|AE007296.1| Sinorhizobium meliloti 1021 plasmid pSymA section 102 of 121 of the complete plasmid sequence Length = 10938 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 attccacggcgcggcacatc 148 |||||||||||||||||||| Sbjct: 5083 attccacggcgcggcacatc 5064
>ref|NM_146177.1| Mus musculus suppressor of variegation 4-20 homolog 2 (Drosophila) (Suv420h2), mRNA Length = 2147 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 531 gaagaagaatgagaagctggagctgctg 558
>gb|AY590469.1| Homo sapiens MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (MCM3AP) gene, complete cds Length = 54127 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cctcctccactggctgggga 20 |||||||||||||||||||| Sbjct: 6884 cctcctccactggctgggga 6865
>ref|XM_726416.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00460) partial mRNA Length = 750 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccgccgaccagcgacagaac 178 |||||||||||||||||||| Sbjct: 50 ccgccgaccagcgacagaac 69
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gctgctgataaaggactacccgta 372 ||||||||| |||||||||||||| Sbjct: 1929 gctgctgatcaaggactacccgta 1952
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgccgccgaccagcgac 173 |||||||||||||||||||| Sbjct: 2497002 cggcgccgccgaccagcgac 2496983
>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10 Length = 312050 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccggtggtgatcgcggcgaaccg 60 |||||||||||||||||| ||||| Sbjct: 256646 gccggtggtgatcgcggccaaccg 256623
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tcgtcatcggcgccgccgac 166 |||||||||||||||||||| Sbjct: 3352465 tcgtcatcggcgccgccgac 3352484
>dbj|AK137449.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830002B05 product:hypothetical Nuclear protein SET/SET domain profile containing protein, full insert sequence Length = 2178 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 533 gaagaagaatgagaagctggagctgctg 560
>dbj|AK154848.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109F14 product:hypothetical Nuclear protein SET/SET domain profile containing protein, full insert sequence Length = 2773 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 1132 gaagaagaatgagaagctggagctgctg 1159
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 acgatggagccggtggtgatcgcg 52 |||||||||||||||||| ||||| Sbjct: 697260 acgatggagccggtggtggtcgcg 697283
>ref|XM_218221.3| PREDICTED: Rattus norvegicus suppressor of variegation 4-20 homolog 2 (Drosophila) (predicted) (Suv420h2_predicted), mRNA Length = 2171 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 gaagaagcatgaggagctggagctgctg 355 ||||||| ||||| |||||||||||||| Sbjct: 498 gaagaagaatgagaagctggagctgctg 525
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 40.1 bits (20), Expect = 5.1 Identities = 59/72 (81%) Strand = Plus / Plus Query: 7 ccactggctggggacgcacgcgacgatggagccggtggtgatcgcggcgaaccggcagct 66 |||||||||| ||||||||| ||| |||||| | || |||||| | ||||||||||| Sbjct: 1843 ccactggctgaacacgcacgcggtgatcgagccgttcgtaatcgcgacaaaccggcagct 1902 Query: 67 gagcgtgctgca 78 |||||| |||| Sbjct: 1903 cagcgtggtgca 1914
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cctcctccactggctgggga 20 |||||||||||||||||||| Sbjct: 298028 cctcctccactggctgggga 298047
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cggtggtgatcgcggcgaac 58 |||||||||||||||||||| Sbjct: 594894 cggtggtgatcgcggcgaac 594875
>dbj|AP000471.2| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B2308H15 Length = 75008 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cctcctccactggctgggga 20 |||||||||||||||||||| Sbjct: 12432 cctcctccactggctgggga 12451 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,391,540 Number of Sequences: 3902068 Number of extensions: 2391540 Number of successful extensions: 50492 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49174 Number of HSP's gapped (non-prelim): 1316 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
