>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein|
          Length = 145

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +3

Query: 303 CPRTISGARRGCALS*CPCPSRPLRLRCGSLPTRLECPPRSC 428
           CP T   A   CA   CPCP +P        PT+  C P+ C
Sbjct: 61  CPATCPAA---CA---CPCPMKP------CCPTKCTCCPKKC 90

>K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297|
          Length = 1411

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -3

Query: 438 RMRGSSSADTPASSVRNRSAAVMVSTGTDISSGHIP 331
           R+RGSS A + AS  R+RS+++     TD  SG +P
Sbjct: 392 RLRGSSMASSVASEPRSRSSSL---NSTDSGSGLLP 424

>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain|
           associated with RING and Traf domains protein 1)
           (Malignant 62) (RING finger protein 83)
          Length = 470

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 279 QQSCSRRACPRTISGARRGCALS*CPCPSR-PLRLRCGSLPTRL--ECPPR 422
           ++ C      R + G    C+ +  PCP+R P++L    LP  L  +CP R
Sbjct: 87  EEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKR 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,677,812
Number of Sequences: 219361
Number of extensions: 802525
Number of successful extensions: 2400
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2399
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)