>ENO_THEVO (Q979Z9) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 401

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -1

Query: 297 DGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPSANLQVAHRSRSTS 118
           D +Y+TNPD    GI+   T  V    +  G  +K   A+S +        V+HRS  T+
Sbjct: 301 DDLYTTNPDRIRKGIELGSTNAVLIKVNQIGTLTKAQEAASLASSAGLKNVVSHRSGETT 360

Query: 117 PD-MADLAI 94
            D +A L++
Sbjct: 361 DDFLAHLSV 369

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 28/97 (28%), Positives = 40/97 (41%)
 Frame = -1

Query: 402  GTAPRRRCAMDASCPRRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPTTCVPR 223
            G  P  R  M    PR +   P      +   F P G+    P  +H+ +  A      R
Sbjct: 2501 GIPPHIRRPMSMEMPRPSNNPPLNNPVGLPQHFPPQGL----PVQQHNILGQAFIELRHR 2556

Query: 222  SCDGCGPRSKLPFASSPSVIPSANLQVAHRSRSTSPD 112
            + DG   RS+LPFA+SPS +  +     H +    PD
Sbjct: 2557 APDG---RSRLPFAASPSSVIESPSHPRHGNFLPRPD 2590

>Y1903_CORGL (Q6M4B7) Hypothetical RNA methyltransferase Cgl1903/cg2084 (EC|
           2.1.1.-)
          Length = 412

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 82  IGAKDGKVSHVRASAPASMCDLQIGARNHRWAAGE 186
           IG  DG+V  V+   P  + D++I     +WA GE
Sbjct: 27  IGHHDGRVIFVKGGIPGDVVDVEIAQLKKKWARGE 61

>ENO_THEAC (Q9HJT1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 401

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -1

Query: 297 DGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPSANLQVAHRSRSTS 118
           D +Y+TNPD    G++   T  V    +  G  S    A + +        V+HRS  T+
Sbjct: 301 DDLYTTNPDRIRKGVEKKSTNAVLIKVNQIGTLSAAREAVAVATFAGMKNIVSHRSGETT 360

Query: 117 PD-MADLAI-FGPNVQET 70
            D +A L++ FG    +T
Sbjct: 361 DDFLAHLSVAFGSTFVKT 378

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -1

Query: 402 GTAPRRRCAMDASCPRRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDA 244
           GTA R RC+ D++ P  +   P G+    S C          P    DG+D A
Sbjct: 441 GTAGRERCSQDSASPASSTGLPEGSEPESSCC----------PRTPEDGVDSA 483

>HMX2_MOUSE (P43687) Homeobox protein HMX2 (Homeobox protein Nkx-5.2)|
          Length = 273

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 23/95 (24%), Positives = 33/95 (34%)
 Frame = -1

Query: 309 CFCPDGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPSANLQVAHRS 130
           CFCPD      P  +H      P    P+   G GP +      +P + PS         
Sbjct: 65  CFCPDPHGPKEPSPKHHTPIPFPCLGTPKGSGGAGPAAS---ERTPFLSPS--------- 112

Query: 129 RSTSPDMADLAIFGPNVQETRTRLIRRRAPDPVPE 25
                         P+ +E + RL+   +P P PE
Sbjct: 113 -------------HPDFKEEKERLLPAGSPSPGPE 134

>CASL_HUMAN (Q14511) Enhancer of filamentation 1 (HEF1) (CRK-associated|
           substrate-related protein) (CAS-L) (CasL) (p105)
           (Protein NEDD9) (NY-REN-12 antigen)
          Length = 834

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/65 (32%), Positives = 27/65 (41%)
 Frame = -1

Query: 306 FCPDGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPSANLQVAHRSR 127
           F P    +  PD+R +G+ D P TC         P  K         IP A   VA R +
Sbjct: 243 FPPPMRQAGRPDLRPEGVYDIPPTCTK-------PAGKDLHVKYNCDIPGAAEPVARRHQ 295

Query: 126 STSPD 112
           S SP+
Sbjct: 296 SLSPN 300

>NAS9_HORVU (Q9XFB7) Nicotianamine synthase 9 (EC 2.5.1.43)|
           (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-
           adenosyl-methionine 3-amino-3-carboxypropyltransferase
           9)
          Length = 340

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 174 PSVIPSANLQVAHRSRSTS---PDMADLAIFGPNVQETRTRLIR 52
           PS+ PS  +        TS   P   D+   GP+ QE R RLIR
Sbjct: 33  PSLSPSPEVNALFTELVTSCIPPSTVDVDALGPDAQEMRARLIR 76

>VLPE_MYCHR (Q49537) Variant surface antigen E precursor (VLPE prolipoprotein)|
          Length = 243

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = -1

Query: 336 SGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPS 157
           SG  S+ S    PDG +S NP          PTT  P+  +   P +  P  S+PS   +
Sbjct: 81  SGNGSSNSSVSTPDGQHS-NPS--------NPTTSDPKESNPSNPTTSDPKESNPSNPTT 131

Query: 156 ANLQVAHRSRSTSPD 112
           ++ Q ++ S  T+ D
Sbjct: 132 SDGQHSNPSNPTTSD 146

>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
 Frame = -1

Query: 408  APGTAPRRRCAMDASCPRRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPTTCV 229
            AP   P    A   + P+ T+ A    T+  S    P+ +  T P+++     D P T  
Sbjct: 1124 APEPHPSTSTAQPVT-PKPTSQATRSRTNRSS-VKTPEPVVPTAPELQPSTSTDQPVTSE 1181

Query: 228  PRSCDGCGPRSKLPFASSPSVIPSANLQVAHRSRSTSPDMADLAIFGPNVQETRTRLIRR 49
            P S    G +S+    +  +V+P+A L++   + +  P  ++     P  Q TR R  R 
Sbjct: 1182 PTSQVTRGRKSRSSVKTPETVVPTA-LELQPSTSTDRPVTSE-----PTSQATRGRKNRS 1235

Query: 48   --RAPDPV 31
              + P+PV
Sbjct: 1236 SVKTPEPV 1243

>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = -1

Query: 375  MDASCPRRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGI--DDAPTTC 232
            +D SC       PSG T     C CP+G Y  N     D +  D    TC
Sbjct: 4177 LDLSCDFLCLLNPSGAT-----CICPEGKYMMNGTCHDDSLLDDSCKLTC 4221

>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/75 (25%), Positives = 27/75 (36%)
 Frame = -1

Query: 339 PSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIP 160
           P+   ++  P F P    ++N     D + +      P    G GPR   PF  SP   P
Sbjct: 12  PNSQQNSGPPNFYPGSQGNSN--ALADNMQNLSLNRPPPMMPGSGPRPPPPFGQSPQPFP 69

Query: 159 SANLQVAHRSRSTSP 115
             +       R  SP
Sbjct: 70  QQSPSYGAPQRGPSP 84

>FBN2_MOUSE (Q61555) Fibrillin-2 precursor|
          Length = 2907

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = -1

Query: 396  APRRRCAMDASCPRRTA*APSGTTSTMSPC-----FCPDG 292
            +P  RC +DA+CPR  A     T   ++ C      CP+G
Sbjct: 923  SPCERCELDAACPRGFARIKGVTCEDVNECEVFPGVCPNG 962

>GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 188 GNFERGPQPSQLRGTQVVGASSIPSWRTSGFVEYIPS 298
           GN ER P PS L+  Q V  +++PS+  S  V  IP+
Sbjct: 201 GNLER-PTPSFLKADQPVDMNNLPSFGVSILVPLIPA 236

>GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 188 GNFERGPQPSQLRGTQVVGASSIPSWRTSGFVEYIPS 298
           GN ER P PS L+  Q V  +++PS+  S  V  IP+
Sbjct: 201 GNLER-PTPSFLKADQPVDMNNLPSFGVSILVPLIPA 236

>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -1

Query: 309 CFCPDGM--YSTNPDVRHDGIDDAPTTCVPRSCDGC-GPRSK 193
           CFCP+GM  +ST+  V           CVP  C  C GP  +
Sbjct: 833 CFCPEGMTLFSTSAQV-----------CVPTGCPRCLGPHGE 863

>TAR1_KLULA (Q6CQE5) Protein TAR1|
          Length = 109

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 288 YSTNPDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVIPSANLQV 142
           ++ N D RH G   + T+C        GP +KLP ++  S +  A  Q+
Sbjct: 63  FTNNWDPRHTGFSPSMTSCSKEHRQ--GPATKLPSSNYNSDVEDARFQI 109

>HIPK3_HUMAN (Q9H422) Homeodomain-interacting protein kinase 3 (EC 2.7.11.1)|
            (Homolog of protein kinase YAK1) (Fas-interacting
            serine/threonine-protein kinase) (FIST) (Androgen
            receptor-interacting nuclear protein kinase) (ANPK)
          Length = 1215

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 24/74 (32%), Positives = 32/74 (43%)
 Frame = -1

Query: 387  RRCAMDASCPRRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPTTCVPRSCDGC 208
            R C++  S P  T    S   S+ SPC  P+ M     +   D +D +PT+      D  
Sbjct: 907  RMCSL--SSPDSTLSTSSSGQSSPSPCKRPNSMSDEEQESSCDTVDGSPTS------DSS 958

Query: 207  GPRSKLPFASSPSV 166
            G  S  PFA S  V
Sbjct: 959  GHDS--PFAESTFV 970

>DNA2_SCHPO (Q9URU2) DNA replication ATP-dependent helicase dna2 (EC 3.6.1.-)|
          Length = 1398

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 276 PDVRHDGIDDAPTTCVPRSCDGCGPRSKLPFASSPSVI 163
           PD+  D IDD        SCDGC P     F+S  +V+
Sbjct: 332 PDINSDFIDDWDD-----SCDGCTPGELCEFSSEYTVL 364

>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
 Frame = -1

Query: 408 APGTAPRRRCAMDASCP---RRTA*APSGTTSTMSPCFCPDGMYSTNPDVRHDGIDDAPT 238
           +P T+P    A  +  P     +  AP  +TS +SP   P  M S    +        P 
Sbjct: 194 SPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAP--MTSPPAPMAPKSSSTIPP 251

Query: 237 TCVPRSCD--GCGPRSKLPFASSPSVIPSANLQVAHRSRSTSPDMADLAIFGPN 82
           +  P +       P+S  P ++SP+V PS  L     + S+  D    +  GP+
Sbjct: 252 SSAPMTSPPGSMAPKSSSPVSNSPTVSPS--LAPGGSTSSSPSDSPSGSAMGPS 303


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,371,754
Number of Sequences: 219361
Number of extensions: 1000943
Number of successful extensions: 3646
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3640
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)