ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA 174 1e-40
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 4e-07
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
7dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
8dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
9dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
10gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
11ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.092
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
13dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
14dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
15dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.092
16ref|XM_750315.1| Aspergillus fumigatus Af293 RNA helicase Dbp (A... 44 0.36
17dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
18dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
19dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
20dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.36
21ref|NM_022511.2| Rattus norvegicus profilin 1 (Pfn1), mRNA 42 1.4
22ref|XM_848667.1| PREDICTED: Canis familiaris similar to Urocorti... 42 1.4
23emb|Z98751.1|HS560B9 Human DNA sequence from clone RP4-560B9 on ... 42 1.4
24emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chrom... 42 1.4
25emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 42 1.4
26emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chr... 42 1.4
27dbj|AK131636.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 1.4
28dbj|AK150780.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.4
29dbj|AK152491.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.4
30dbj|AK160191.1| Mus musculus ES cells cDNA, RIKEN full-length en... 42 1.4
31dbj|AK034932.1| Mus musculus 12 days embryo embryonic body betwe... 42 1.4
32dbj|AK028117.1| Mus musculus adult male small intestine cDNA, RI... 42 1.4
33dbj|AK011066.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 42 1.4
34gb|AC093766.3| Homo sapiens BAC clone RP11-98O2 from 4, complete... 42 1.4
35dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09... 42 1.4
36gb|BC002080.1| Mus musculus profilin 1, mRNA (cDNA clone MGC:623... 42 1.4
37gb|BC062405.1| Rattus norvegicus profilin 1, mRNA (cDNA clone MG... 42 1.4
38dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.4
39ref|NM_011072.2| Mus musculus profilin 1 (Pfn1), mRNA 42 1.4
40dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 1.4
41dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 1.4
42gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, co... 40 5.6
43ref|NM_021114.1| Homo sapiens serine peptidase inhibitor, Kazal ... 40 5.6
44gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
45gb|BC022514.1| Homo sapiens serine peptidase inhibitor, Kazal ty... 40 5.6
46gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
47ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 5.6
48gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, com... 40 5.6
49emb|X68331.1|MFACTRYIN M.fascicularis mRNA for acrosin-trypsin i... 40 5.6
50emb|X57655.1|HSHUSIII H.sapiens RNA for acrosin-trypsin inhibito... 40 5.6
51emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; ... 40 5.6
52gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.6
53gb|AC022483.7| Homo sapiens BAC clone RP11-533F5 from 4, complet... 40 5.6
54emb|CR542135.1| Homo sapiens full open reading frame cDNA clone ... 40 5.6
55gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome... 40 5.6
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
57dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.6
58dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
59dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
60emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chrom... 40 5.6
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
62gb|M91438.1|HUMHUSII Human kazal-type serine proteinase (HUSI-II... 40 5.6
63gb|M84967.1|HUMHUSIIIA Human acrosin-trypsin inhibitor (HUSI-II)... 40 5.6 
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 906

 Score =  174 bits (88), Expect = 1e-40
 Identities = 154/176 (87%)
 Strand = Plus / Plus

                                                                       
Query: 246 aacaagtggggcccgcagcaccagacggtctctggcgaccattcggccatcaccatctgg 305
           ||||||||||||||||||||||||||  |||| | |||||| ||  || |||||||||||
Sbjct: 154 aacaagtggggcccgcagcaccagaccctctccgccgaccagtcctccctcaccatctgg 213

                                                                       
Query: 306 ctcgacaggacctgcgggagtgggttcaagtcgaagcatgcgtacaggaacggctacttc 365
           |||||||  ||||||||||| ||||||||||| | | |  |||||||||| |||||||||
Sbjct: 214 ctcgacaaaacctgcgggagcgggttcaagtcaaggaagtcgtacaggaatggctacttc 273

                                                                   
Query: 366 gccacccgcatcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
           ||| | ||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 274 gccgctcgcgttaagctccccgccggctacaccgccggcaccaacaccgccttcta 329



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 176 cgcgcagccttctcccggctactacccgagctcg 209
           |||||||||||| || || |||||||||||||||
Sbjct: 84  cgcgcagccttcgccggggtactacccgagctcg 117
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 321      gggagtgggttcaagtcgaagcatgcgtacaggaacggctacttcgccacccgcatcaag 380
                ||||| ||||||||||| | | |  |||||||||| |||||||||||| | ||| | |||
Sbjct: 17438048 gggagcgggttcaagtcaaggaagtcgtacaggaatggctacttcgccgctcgcgttaag 17438107

                                                         
Query: 381      ctccccgccggctacaccgccggcaccaacaccgctttcta 421
                ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 17438108 ctccccgccggctacaccgccggcaccaacaccgccttcta 17438148



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 246      aacaagtggggcccgcagcaccagacggtctctggcgaccattcggccatcaccatctgg 305
                ||||||||||||||||||||||||||  |||| | |||||| ||  || |||||||||||
Sbjct: 17437461 aacaagtggggcccgcagcaccagaccctctccgccgaccagtcctccctcaccatctgg 17437520

                                 
Query: 306      ctcgacaggacctgcgg 322
                |||||||  ||||||||
Sbjct: 17437521 ctcgacaaaacctgcgg 17437537



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 176      cgcgcagccttctcccggctactacccgagctcg 209
                |||||||||||| || || |||||||||||||||
Sbjct: 17437391 cgcgcagccttcgccggggtactacccgagctcg 17437424
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                          
Query: 321    gggagtgggttcaagtcgaagcatgcgtacaggaacggctacttcgccacccgcatcaag 380
              ||||| ||||||||||| | | |  |||||||||| |||||||||||| | ||| | |||
Sbjct: 106272 gggagcgggttcaagtcaaggaagtcgtacaggaatggctacttcgccgctcgcgttaag 106331

                                                       
Query: 381    ctccccgccggctacaccgccggcaccaacaccgctttcta 421
              ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106332 ctccccgccggctacaccgccggcaccaacaccgccttcta 106372



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                          
Query: 246    aacaagtggggcccgcagcaccagacggtctctggcgaccattcggccatcaccatctgg 305
              ||||||||||||||||||||||||||  |||| | |||||| ||  || |||||||||||
Sbjct: 105685 aacaagtggggcccgcagcaccagaccctctccgccgaccagtcctccctcaccatctgg 105744

                               
Query: 306    ctcgacaggacctgcgg 322
              |||||||  ||||||||
Sbjct: 105745 ctcgacaaaacctgcgg 105761



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 176    cgcgcagccttctcccggctactacccgagctcg 209
              |||||||||||| || || |||||||||||||||
Sbjct: 105615 cgcgcagccttcgccggggtactacccgagctcg 105648
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>ref|NM_187656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 783

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
           ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 133 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 192

                   
Query: 414 gctttcta 421
           || |||||
Sbjct: 193 gccttcta 200
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                          
Query: 354    aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
              ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 472083 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 472024

                      
Query: 414    gctttcta 421
              || |||||
Sbjct: 472023 gccttcta 472016
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                          
Query: 354    aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
              ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 472081 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 472022

                      
Query: 414    gctttcta 421
              || |||||
Sbjct: 472021 gccttcta 472014
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>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full
           insert sequence
          Length = 1281

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
           ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 360 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 419

                   
Query: 414 gctttcta 421
           || |||||
Sbjct: 420 gccttcta 427
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>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full
           insert sequence
          Length = 1186

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
           ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 358 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 417

                   
Query: 414 gctttcta 421
           || |||||
Sbjct: 418 gccttcta 425
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>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full
           insert sequence
          Length = 1193

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
           ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 365 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 424

                   
Query: 414 gctttcta 421
           || |||||
Sbjct: 425 gccttcta 432
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>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
             complete sequence
          Length = 116214

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 354   aacggctacttcgccacccgcatcaagctccccgccggctacaccgccggcaccaacacc 413
             ||||||||||||| | ||  ||||||| ||||| |||||||||||||||||  |||||||
Sbjct: 70543 aacggctacttcggcgcctccatcaaggtcccctccggctacaccgccggcgtcaacacc 70484

                     
Query: 414   gctttcta 421
             || |||||
Sbjct: 70483 gccttcta 70476
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>ref|XM_463978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1560

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 374 catcaagctccccgccggctacaccgccggc 404
           ||||||||||||| ||| |||||||||||||
Sbjct: 558 catcaagctcccctccgactacaccgccggc 588
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 374     catcaagctccccgccggctacaccgccggc 404
               ||||||||||||| ||| |||||||||||||
Sbjct: 1444587 catcaagctcccctccgactacaccgccggc 1444617
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>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0482F12
          Length = 147735

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 374    catcaagctccccgccggctacaccgccggc 404
              ||||||||||||| ||| |||||||||||||
Sbjct: 125859 catcaagctcccctccgactacaccgccggc 125889
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>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0576F08
          Length = 135314

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 374  catcaagctccccgccggctacaccgccggc 404
            ||||||||||||| ||| |||||||||||||
Sbjct: 8008 catcaagctcccctccgactacaccgccggc 8038
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>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full
           insert sequence
          Length = 1562

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 374 catcaagctccccgccggctacaccgccggc 404
           ||||||||||||| ||| |||||||||||||
Sbjct: 558 catcaagctcccctccgactacaccgccggc 588
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>ref|XM_750315.1| Aspergillus fumigatus Af293 RNA helicase Dbp (Afu2g10750) partial
           mRNA
          Length = 1698

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 113 cagcctctccttgctcccggccatgg 138
           ||||||||||||||||||||| ||||
Sbjct: 556 cagcctctccttgctcccggcgatgg 581
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 377      caagctccccgccggctacaccgccg 402
                ||||||||||||||||||| ||||||
Sbjct: 19908020 caagctccccgccggctacgccgccg 19908045
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>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0217C03
          Length = 58309

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 377   caagctccccgccggctacaccgccg 402
             ||||||||||||||||||| ||||||
Sbjct: 15106 caagctccccgccggctacgccgccg 15131
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>dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O03, full
            insert sequence
          Length = 1843

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 377  caagctccccgccggctacaccgccg 402
            ||||||||||||||||||| ||||||
Sbjct: 1064 caagctccccgccggctacgccgccg 1089
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 127     tcccggccatggcgctgctgctcctg 152
               ||||||||| ||||||||||||||||
Sbjct: 2152947 tcccggccacggcgctgctgctcctg 2152922
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>ref|NM_022511.2| Rattus norvegicus profilin 1 (Pfn1), mRNA
          Length = 862

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 126 cccggccatggcgctgctgct 106
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>ref|XM_848667.1| PREDICTED: Canis familiaris similar to Urocortin precursor
           (LOC611041), mRNA
          Length = 381

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 135 atggcgctgctgctcctggca 155
           |||||||||||||||||||||
Sbjct: 31  atggcgctgctgctcctggca 51
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>emb|Z98751.1|HS560B9 Human DNA sequence from clone RP4-560B9 on chromosome 1q24-25
            Contains three processed pseudogenes and the VAMP4 gene
            for vesicle-associated membrane protein 4, complete
            sequence
          Length = 99074

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  cccggccatggcgctgctgct 148
            |||||||||||||||||||||
Sbjct: 2157 cccggccatggcgctgctgct 2177
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>emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chromosome 11, complete
              sequence
          Length = 194230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    cccggccatggcgctgctgct 148
              |||||||||||||||||||||
Sbjct: 177425 cccggccatggcgctgctgct 177445
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   aacggctacttcgccacccgc 374
             |||||||||||||||||||||
Sbjct: 66288 aacggctacttcgccacccgc 66268
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>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
             Gp1ba gene for glycoprotein 1b alpha polypeptide, the
             Slc25a11 gene for solute carrier family 25 (mitochondrial
             carrier; oxoglutarate carrier) member 11, the gene for a
             novel PA domain and C3HC4 type zinc finger (RING finger)
             containing protein, the Pfn1 gene for profilin 1, five
             novel genes, the Eno3 gene for muscle enolase 3 beta, the
             Spag7 gene for sperm associated antigen 7, the Kif1c gene
             for kinesin family member 1C, a ribosomal protein 37A
             (Rpl37a) pseudogene, the gene for a novel zinc finger
             protein and six CpG islands, complete sequence
          Length = 207086

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   cccggccatggcgctgctgct 148
             |||||||||||||||||||||
Sbjct: 21836 cccggccatggcgctgctgct 21856
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>dbj|AK131636.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
           library, clone:1500038L17 product:unclassifiable, full
           insert sequence
          Length = 829

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 374 cccggccatggcgctgctgct 394
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>dbj|AK150780.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830015F09 product:profilin 1,
           full insert sequence
          Length = 820

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 136 cccggccatggcgctgctgct 116
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>dbj|AK152491.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830076F02 product:profilin 1,
           full insert sequence
          Length = 851

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 165 cccggccatggcgctgctgct 145
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>dbj|AK160191.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410026M17 product:profilin 1, full insert
           sequence
          Length = 852

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 165 cccggccatggcgctgctgct 145
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>dbj|AK034932.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430063L06 product:profilin 1, full insert
           sequence
          Length = 1999

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 138 cccggccatggcgctgctgct 118
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>dbj|AK028117.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010010C10 product:profilin 1,
           full insert sequence
          Length = 807

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 130 cccggccatggcgctgctgct 110
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>dbj|AK011066.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510040G14 product:profilin 1, full
           insert sequence
          Length = 854

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 164 cccggccatggcgctgctgct 144
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>gb|AC093766.3| Homo sapiens BAC clone RP11-98O2 from 4, complete sequence
          Length = 168569

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    gaccattcggccatcaccatc 302
              |||||||||||||||||||||
Sbjct: 150067 gaccattcggccatcaccatc 150087
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>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete
             sequences
          Length = 201997

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   gctgctgctcctggcaatggc 160
             |||||||||||||||||||||
Sbjct: 65487 gctgctgctcctggcaatggc 65507
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>gb|BC002080.1| Mus musculus profilin 1, mRNA (cDNA clone MGC:6236 IMAGE:3490976),
           complete cds
          Length = 885

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 152 cccggccatggcgctgctgct 132
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>gb|BC062405.1| Rattus norvegicus profilin 1, mRNA (cDNA clone MGC:72445
           IMAGE:5623232), complete cds
          Length = 862

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 126 cccggccatggcgctgctgct 106
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>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   gctgctgctcctggcaatggc 160
             |||||||||||||||||||||
Sbjct: 65275 gctgctgctcctggcaatggc 65295
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>ref|NM_011072.2| Mus musculus profilin 1 (Pfn1), mRNA
          Length = 854

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cccggccatggcgctgctgct 148
           |||||||||||||||||||||
Sbjct: 164 cccggccatggcgctgctgct 144
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>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171
            region, complete sequence
          Length = 124516

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 140  gctgctgctcctggcaatggc 160
            |||||||||||||||||||||
Sbjct: 5392 gctgctgctcctggcaatggc 5412
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>dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2042A8, MX1-D21S171
             region, complete sequence
          Length = 81896

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   gctgctgctcctggcaatggc 160
             |||||||||||||||||||||
Sbjct: 49616 gctgctgctcctggcaatggc 49636
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>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence
          Length = 184327

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    tccttgctcccggccatggc 139
              ||||||||||||||||||||
Sbjct: 160980 tccttgctcccggccatggc 160999
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>ref|NM_021114.1| Homo sapiens serine peptidase inhibitor, Kazal type 2
           (acrosin-trypsin inhibitor) (SPINK2), mRNA
          Length = 594

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 91  tggcgctgctgctcctggca 110
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 374    catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
              ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 113309 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 113356
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>gb|BC022514.1| Homo sapiens serine peptidase inhibitor, Kazal type 2
           (acrosin-trypsin inhibitor), mRNA (cDNA clone MGC:26562
           IMAGE:4812189), complete cds
          Length = 631

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 92  tggcgctgctgctcctggca 111
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 374   catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
             ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 12928 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 12975
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>ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03742.1)
           partial mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 atggcgctgctgctcctggc 154
           ||||||||||||||||||||
Sbjct: 617 atggcgctgctgctcctggc 636
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>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tccttgctcccggccatggc 139
              ||||||||||||||||||||
Sbjct: 187906 tccttgctcccggccatggc 187887
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>emb|X68331.1|MFACTRYIN M.fascicularis mRNA for acrosin-trypsin inhibitor
          Length = 535

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 26  tggcgctgctgctcctggca 45
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>emb|X57655.1|HSHUSIII H.sapiens RNA for acrosin-trypsin inhibitor (HUSI-II)
          Length = 594

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 91  tggcgctgctgctcctggca 110
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>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5
          Length = 316900

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    cgtacaggaacggctacttc 365
              ||||||||||||||||||||
Sbjct: 180332 cgtacaggaacggctacttc 180351
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 136    tggcgctgctgctcctggcaatggcggt 163
              ||||||||||||||||||| ||| ||||
Sbjct: 790343 tggcgctgctgctcctggccatgtcggt 790370
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>gb|AC022483.7| Homo sapiens BAC clone RP11-533F5 from 4, complete sequence
          Length = 205640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    tggcgctgctgctcctggca 155
              ||||||||||||||||||||
Sbjct: 139137 tggcgctgctgctcctggca 139118
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>emb|CR542135.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0125D for
           gene SPINK2, serine protease inhibitor, Kazal type, 2
           (acrosin-trypsin inhibitor); complete cds, without
           stopcodon
          Length = 252

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 23  tggcgctgctgctcctggca 42
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>gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome 9, complete sequence
          Length = 225286

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   gctgctgctcctggcaatgg 159
             ||||||||||||||||||||
Sbjct: 60951 gctgctgctcctggcaatgg 60970
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 374      catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
                ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 19010111 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 19010158
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 355     acggctacttcgccacccgc 374
               ||||||||||||||||||||
Sbjct: 1675133 acggctacttcgccacccgc 1675152
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>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
           insert sequence
          Length = 977

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 374 catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
           ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 273 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 320
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>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
           insert sequence
          Length = 1053

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 374 catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
           ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 270 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 317
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>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete
             sequence
          Length = 228508

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   gctgctgctcctggcaatgg 159
             ||||||||||||||||||||
Sbjct: 64136 gctgctgctcctggcaatgg 64117
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 374      catcaagctccccgccggctacaccgccggcaccaacaccgctttcta 421
                ||||||||||  ||||||| || |||||||||||  |||||| |||||
Sbjct: 19168760 catcaagctcgtcgccggcgactccgccggcaccgtcaccgccttcta 19168807
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>gb|M91438.1|HUMHUSII Human kazal-type serine proteinase (HUSI-II) gene, complete cds
          Length = 597

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tggcgctgctgctcctggca 155
           ||||||||||||||||||||
Sbjct: 88  tggcgctgctgctcctggca 107
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>gb|M84967.1|HUMHUSIIIA Human acrosin-trypsin inhibitor (HUSI-II) gene
          Length = 1780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  tggcgctgctgctcctggca 155
            ||||||||||||||||||||
Sbjct: 1147 tggcgctgctgctcctggca 1166


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,908,241
Number of Sequences: 3902068
Number of extensions: 2908241
Number of successful extensions: 44626
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44205
Number of HSP's gapped (non-prelim): 420
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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