ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7) 33 0.24
2OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5) 30 2.7
3OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1) 28 7.7

>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)|
          Length = 766

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +1

Query: 382 NSPIEQVALTVPAGDDPDL 438
           NSPI QVALTVP  DDP L
Sbjct: 54  NSPIRQVALTVPTTDDPSL 72



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>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)|
          Length = 753

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +1

Query: 382 NSPIEQVALTVPAGDDPDL 438
           +SPIE+V LTVP  DDP L
Sbjct: 31  DSPIEEVRLTVPITDDPSL 49



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>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)|
          Length = 755

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 382 NSPIEQVALTVPAGDDPDL 438
           ++PIE+V LTVP  DDP L
Sbjct: 33  DNPIEEVRLTVPITDDPTL 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,482,138
Number of Sequences: 219361
Number of extensions: 715585
Number of successful extensions: 1715
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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