ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
2ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 391 e-105
4dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic D... 391 e-105
5dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
6dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
7dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103
8gb|AY109891.1| Zea mays CL53767_1 mRNA sequence 167 4e-38
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
10dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
11dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
12dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 119 8e-24
13dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
14dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
15gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence 80 7e-12
16gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase... 56 1e-04
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
18dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
19dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
20dbj|AK121178.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
21dbj|AK073416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
22ref|NM_001031351.1| Gallus gallus tRNA 5-methylaminomethyl-2-thi... 42 1.5
23emb|AJ719974.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.5
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
26dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
30ref|XM_956314.1| Neurospora crassa OR74A hypothetical protein ( ... 40 5.9
31ref|XM_326813.1| Neurospora crassa OR74A hypothetical protein ( ... 40 5.9
32gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.9
33emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 5.9
34emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC... 40 5.9
35emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cos... 40 5.9
36gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.9
37gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, com... 40 5.9
38gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 5.9

>ref|XM_550012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1990

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Minus

                                                                       
Query: 2   ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
           |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 797 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 738

                                                                       
Query: 62  tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
           |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 737 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 678

                                                                       
Query: 122 tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 677 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 618

                                                                       
Query: 182 ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
           ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 617 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 558

                                                                       
Query: 242 gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
           ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 557 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 498

                                                                    
Query: 302 ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
           |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 497 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 441



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>ref|NM_184232.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
            |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 2111 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 2170

                                                                        
Query: 62   tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
            |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 2171 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 2230

                                                                        
Query: 122  tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 2231 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 2290

                                                                        
Query: 182  ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
            ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 2291 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 2350

                                                                        
Query: 242  gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
            ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 2351 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 2410

                                                                     
Query: 302  ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
            |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 2411 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 2467



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Plus

                                                                           
Query: 2       ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
               |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 1700716 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 1700775

                                                                           
Query: 62      tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
               |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 1700776 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 1700835

                                                                           
Query: 122     tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
               ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 1700836 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 1700895

                                                                           
Query: 182     ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
               ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 1700896 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 1700955

                                                                           
Query: 242     gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
               ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 1700956 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 1701015

                                                                        
Query: 302     ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
               |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 1701016 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 1701072



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>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504H10
          Length = 143515

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Plus

                                                                         
Query: 2     ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
             |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 43059 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 43118

                                                                         
Query: 62    tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
             |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 43119 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 43178

                                                                         
Query: 122   tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
             ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 43179 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 43238

                                                                         
Query: 182   ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
             ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 43239 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 43298

                                                                         
Query: 242   gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
             ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 43299 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 43358

                                                                      
Query: 302   ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
             |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 43359 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 43415



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>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full
            insert sequence
          Length = 3486

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
            |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 2112 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 2171

                                                                        
Query: 62   tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
            |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 2172 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 2231

                                                                        
Query: 122  tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 2232 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 2291

                                                                        
Query: 182  ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
            ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 2292 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 2351

                                                                        
Query: 242  gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
            ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 2352 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 2411

                                                                     
Query: 302  ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
            |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 2412 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 2468



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>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full
            insert sequence
          Length = 3193

 Score =  391 bits (197), Expect = e-105
 Identities = 317/357 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
            |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 2111 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 2170

                                                                        
Query: 62   tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
            |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 2171 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 2230

                                                                        
Query: 122  tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 2231 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 2290

                                                                        
Query: 182  ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
            ||||||||||||||||||||| |||||||||||||  ||||||  |||| ||| ||||||
Sbjct: 2291 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgctcggc 2350

                                                                        
Query: 242  gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
            ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 2351 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 2410

                                                                     
Query: 302  ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
            |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 2411 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 2467



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>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full
           insert sequence
          Length = 1990

 Score =  383 bits (193), Expect = e-103
 Identities = 316/357 (88%)
 Strand = Plus / Minus

                                                                       
Query: 2   ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
           |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||   |
Sbjct: 797 ttctacccgttctccagggaccatgccaacttcgcgtcgccgaggcaggagctgtatgtg 738

                                                                       
Query: 62  tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
           |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 737 tgggagtccgtggccaagtcggctcggaacgcgctcggcatgcggtacaggctgctccct 678

                                                                       
Query: 122 tacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgcggccgctc 181
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | 
Sbjct: 677 tacctgtacacgctcaactaccaggcgcatctcaccggcgctccggtggcgcggccggtg 618

                                                                       
Query: 182 ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
           ||||||||||||||||||||| |||||||||||||  ||||||  |||| |||  |||||
Sbjct: 617 ttcttctcgttcccggacttcacgccgtgctacgggctgagcacgcagtacctgttcggc 558

                                                                       
Query: 242 gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
           ||  ||||||||||||| ||||| |||||||||||||||| ||| |||  |||  |||||
Sbjct: 557 gcgagcgtcatggtgtcgccggtgctcgagcagggcgccacctcggtgagcgccatgttc 498

                                                                    
Query: 302 ccgccgggcacgtggtacaacctgttcgacacaagcaaggcggtggtgtccacgggc 358
           |||||||| |  |||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 497 ccgccggggagctggtacaacctgttcgacacgaccaaggtggtggtgtccaggggc 441



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>gb|AY109891.1| Zea mays CL53767_1 mRNA sequence
          Length = 812

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   ttctacccgttctcaagggaccacgccaacttcgcctcggcgaggcaggagctgtaccag 61
           |||||||| ||||| |||||||| ||||||||||| ||  ||||||||||||||||    
Sbjct: 360 ttctaccccttctccagggaccatgccaacttcgcgtcaccgaggcaggagctgtatgtc 419

                                                                       
Query: 62  tgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacaggatgctcccg 121
           ||||| |||||||||| ||| || ||||||||||||||||||||||||| | ||||||| 
Sbjct: 420 tgggactccgtggcgaagtctgctcggaacgcgctcggcatgcggtacaagctgctcccc 479

                                           
Query: 122 tacctgtacacgctcaactaccaggcgcacct 153
           ||||||||||||||||||||||||||||||||
Sbjct: 480 tacctgtacacgctcaactaccaggcgcacct 511



 Score =  129 bits (65), Expect = 8e-27
 Identities = 119/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 182 ttcttctcgttcccggacttcgcgccgtgctacggcgtgagcaaccagttcctactcggc 241
           |||||||| ||||| |||||| |||||||||||||  ||||||  |||||||| ||||| 
Sbjct: 540 ttcttctccttccccgacttcacgccgtgctacgggctgagcacgcagttcctgctcggt 599

                                                                       
Query: 242 gccggcgtcatggtgtccccggtcctcgagcagggcgccagctccgtggacgcggtgttc 301
            |||||||||||||||||||||||||||||||||||||||  || |||  |||  |||||
Sbjct: 600 cccggcgtcatggtgtccccggtcctcgagcagggcgccacttcggtgagcgccatgttc 659

                            
Query: 302 ccgccgggcacgtggta 318
           ||||||||||| |||||
Sbjct: 660 ccgccgggcacctggta 676



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 383 gcgccgctgaacgaggtgaacgtgcacgtgcaccagggcacggtcctgccgctgcag 439
           ||||||||||||||| | |||||||||||| |||||  |||| |||||||| |||||
Sbjct: 738 gcgccgctgaacgagatcaacgtgcacgtgtaccagaacacgatcctgccgatgcag 794



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 50       gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
                |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 27662755 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 27662696

                                                                            
Query: 110      aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
                 || ||||||| ||| ||||||||||||  ||| ||||||||  ||||||||| ||| | 
Sbjct: 27662695 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccaccggcgcgcccatc 27662636

                                    
Query: 170      gcgcggccgctcttcttctc 189
                ||||||||||||||||||||
Sbjct: 27662635 gcgcggccgctcttcttctc 27662616



 Score =  119 bits (60), Expect = 8e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                            
Query: 50       gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
                |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 27721282 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 27721341

                                                                            
Query: 110      aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
                 || ||||||| ||| ||||||||||||  ||| ||||||||  ||| ||||| ||| | 
Sbjct: 27721342 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatc 27721401

                                    
Query: 170      gcgcggccgctcttcttctc 189
                ||||||||||||||||||||
Sbjct: 27721402 gcgcggccgctcttcttctc 27721421



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 65       gagtccgtggcgaggtcggcg 85
                |||||||||||||||||||||
Sbjct: 15172657 gagtccgtggcgaggtcggcg 15172677



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 2        ttctacccgttctcaagggaccac 25
                |||||||||||||| |||||||||
Sbjct: 27721234 ttctacccgttctcgagggaccac 27721257



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 65       gagtccgtggcgaggtcggc 84
                ||||||||||||||||||||
Sbjct: 15172601 gagtccgtggcgaggtcggc 15172620



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>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1153E06
          Length = 174588

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 50    gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
             |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 12010 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 11951

                                                                         
Query: 110   aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
              || ||||||| ||| ||||||||||||  ||| ||||||||  ||||||||| ||| | 
Sbjct: 11950 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccaccggcgcgcccatc 11891

                                 
Query: 170   gcgcggccgctcttcttctc 189
             ||||||||||||||||||||
Sbjct: 11890 gcgcggccgctcttcttctc 11871



 Score =  119 bits (60), Expect = 8e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 50    gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
             |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 70537 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 70596

                                                                         
Query: 110   aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
              || ||||||| ||| ||||||||||||  ||| ||||||||  ||| ||||| ||| | 
Sbjct: 70597 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatc 70656

                                 
Query: 170   gcgcggccgctcttcttctc 189
             ||||||||||||||||||||
Sbjct: 70657 gcgcggccgctcttcttctc 70676



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     ttctacccgttctcaagggaccac 25
             |||||||||||||| |||||||||
Sbjct: 70489 ttctacccgttctcgagggaccac 70512



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>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full
            insert sequence
          Length = 2829

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                        
Query: 50   gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
            |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 1900 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 1959

                                                                        
Query: 110  aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
             || ||||||| ||| ||||||||||||  ||| ||||||||  ||||||||| ||| | 
Sbjct: 1960 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccaccggcgcgcccatc 2019

                                
Query: 170  gcgcggccgctcttcttctc 189
            ||||||||||||||||||||
Sbjct: 2020 gcgcggccgctcttcttctc 2039



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>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710B08
          Length = 186991

 Score =  119 bits (60), Expect = 8e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 50    gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
             |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 23791 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 23850

                                                                         
Query: 110   aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
              || ||||||| ||| ||||||||||||  ||| ||||||||  ||| ||||| ||| | 
Sbjct: 23851 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatc 23910

                                 
Query: 170   gcgcggccgctcttcttctc 189
             ||||||||||||||||||||
Sbjct: 23911 gcgcggccgctcttcttctc 23930



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     ttctacccgttctcaagggaccac 25
             |||||||||||||| |||||||||
Sbjct: 23743 ttctacccgttctcgagggaccac 23766



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>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full
            insert sequence
          Length = 2804

 Score =  119 bits (60), Expect = 8e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                        
Query: 50   gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
            |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 1878 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 1937

                                                                        
Query: 110  aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
             || ||||||| ||| ||||||||||||  ||| ||||||||  ||| ||||| ||| | 
Sbjct: 1938 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatc 1997

                                
Query: 170  gcgcggccgctcttcttctc 189
            ||||||||||||||||||||
Sbjct: 1998 gcgcggccgctcttcttctc 2017



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2    ttctacccgttctcaagggaccac 25
            |||||||||||||| |||||||||
Sbjct: 1830 ttctacccgttctcgagggaccac 1853



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>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full
            insert sequence
          Length = 2873

 Score =  119 bits (60), Expect = 8e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                        
Query: 50   gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
            |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| |||
Sbjct: 1946 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 2005

                                                                        
Query: 110  aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
             || ||||||| ||| ||||||||||||  ||| ||||||||  ||| ||||| ||| | 
Sbjct: 2006 cggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatc 2065

                                
Query: 170  gcgcggccgctcttcttctc 189
            ||||||||||||||||||||
Sbjct: 2066 gcgcggccgctcttcttctc 2085



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2    ttctacccgttctcaagggaccac 25
            |||||||||||||| |||||||||
Sbjct: 1898 ttctacccgttctcgagggaccac 1921



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>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence
          Length = 1946

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 50  gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 109
           |||||||||| |||||||   |||||| |||||||| |||| ||||||||  |||| |||
Sbjct: 942 gagctgtacctgtgggagctggtggcgcggtcggcgaggaaggcgctcgggctgcgctac 883

                                                                       
Query: 110 aggatgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtg 169
            || |||| |||||| |||||||||| |  ||| ||||||||  ||| || || ||| | 
Sbjct: 882 cggctgcttccgtacatgtacacgctgatgtacgaggcgcacaccacgggagcgcccatc 823

                               
Query: 170 gcgcggccgctcttcttctc 189
           ||||||||||||||||||||
Sbjct: 822 gcgcggccgctcttcttctc 803



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>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds
          Length = 7113

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 109/136 (80%)
 Strand = Plus / Plus

                                                                        
Query: 54   tgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtacagga 113
            |||||| ||||  ||| ||||||  ||||||| |||| ||||||||  | ||||||  | 
Sbjct: 6287 tgtacctgtggccgtcggtggcggcgtcggcgaggaaggcgctcgggctccggtaccagc 6346

                                                                        
Query: 114  tgctcccgtacctgtacacgctcaactaccaggcgcacctcaccggcgctcccgtggcgc 173
            ||||||| ||| | ||||||||||  ||| |||||||| | || || || ||| | ||||
Sbjct: 6347 tgctcccttacttctacacgctcatgtacgaggcgcacatgacgggggcgcccatcgcgc 6406

                            
Query: 174  ggccgctcttcttctc 189
            ||||||||||||||||
Sbjct: 6407 ggccgctcttcttctc 6422



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 27       ccaacttcgcctcggcgaggca 48
                ||||||||||||||||||||||
Sbjct: 11607369 ccaacttcgcctcggcgaggca 11607390



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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 27     ccaacttcgcctcggcgaggca 48
              ||||||||||||||||||||||
Sbjct: 171027 ccaacttcgcctcggcgaggca 171048



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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1272H04
          Length = 87113

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    ccaacttcgcctcggcgaggca 48
             ||||||||||||||||||||||
Sbjct: 52741 ccaacttcgcctcggcgaggca 52762



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>dbj|AK121178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083G22, full
           insert sequence
          Length = 3866

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 27  ccaacttcgcctcggcgaggca 48
           ||||||||||||||||||||||
Sbjct: 109 ccaacttcgcctcggcgaggca 130



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>dbj|AK073416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040D17, full
           insert sequence
          Length = 3852

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 27  ccaacttcgcctcggcgaggca 48
           ||||||||||||||||||||||
Sbjct: 109 ccaacttcgcctcggcgaggca 130



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>ref|NM_001031351.1| Gallus gallus tRNA 5-methylaminomethyl-2-thiouridylate
           methyltransferase (TRMU), mRNA
          Length = 2905

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 268 cgagcagggcgccagctccgtggac 292
           ||||||||||||| |||||||||||
Sbjct: 158 cgagcagggcgcctgctccgtggac 182



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>emb|AJ719974.1| Gallus gallus mRNA for hypothetical protein, clone 8p20
          Length = 2905

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 268 cgagcagggcgccagctccgtggac 292
           ||||||||||||| |||||||||||
Sbjct: 158 cgagcagggcgcctgctccgtggac 182



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 65      gagtccgtggcgaggtcggcg 85
               |||||||||||||||||||||
Sbjct: 2141142 gagtccgtggcgaggtcggcg 2141162



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 294    cggtgttcccgccgggcacgt 314
              |||||||||||||||||||||
Sbjct: 199909 cggtgttcccgccgggcacgt 199889



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>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0015G09
          Length = 140893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    gagtccgtggcgaggtcggcg 85
             |||||||||||||||||||||
Sbjct: 47171 gagtccgtggcgaggtcggcg 47191



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    gagtccgtggcgaggtcggc 84
             ||||||||||||||||||||
Sbjct: 47115 gagtccgtggcgaggtcggc 47134



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>dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0034G14
          Length = 154120

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     gagtccgtggcgaggtcggcg 85
              |||||||||||||||||||||
Sbjct: 151977 gagtccgtggcgaggtcggcg 151997



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     gagtccgtggcgaggtcggc 84
              ||||||||||||||||||||
Sbjct: 151921 gagtccgtggcgaggtcggc 151940



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 65      gagtccgtggcgaggtcggcg 85
               |||||||||||||||||||||
Sbjct: 2141086 gagtccgtggcgaggtcggcg 2141106



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>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    gagtccgtggcgaggtcggcg 85
             |||||||||||||||||||||
Sbjct: 23366 gagtccgtggcgaggtcggcg 23386



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>ref|XM_956314.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to
            DNA polymerase Tdt-N [Neurospora crassa OR74A]  )
            (NCU01321.1) partial mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ccgctcttcttctcgttccc 195
            ||||||||||||||||||||
Sbjct: 1436 ccgctcttcttctcgttccc 1417



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>ref|XM_326813.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to
            DNA polymerase Tdt-N [Neurospora crassa OR74A]  )
            (NCU01321.1) partial mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ccgctcttcttctcgttccc 195
            ||||||||||||||||||||
Sbjct: 1436 ccgctcttcttctcgttccc 1417



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 254     gtgtccccggtcctcgagcagggc 277
               |||||| |||||||||||||||||
Sbjct: 3085825 gtgtccgcggtcctcgagcagggc 3085848



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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    cgcggtgttcccgccgggca 311
              ||||||||||||||||||||
Sbjct: 278423 cgcggtgttcccgccgggca 278404



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>emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC clone B12K8
          Length = 67453

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ccgctcttcttctcgttccc 195
             ||||||||||||||||||||
Sbjct: 54251 ccgctcttcttctcgttccc 54270



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>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11
          Length = 74317

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ccgctcttcttctcgttccc 195
            ||||||||||||||||||||
Sbjct: 3716 ccgctcttcttctcgttccc 3735



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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     acgtggtacaacctgttcga 330
               ||||||||||||||||||||
Sbjct: 2126943 acgtggtacaacctgttcga 2126962



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>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds
          Length = 2738

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gcgcggccgctcttcttctc 189
            ||||||||||||||||||||
Sbjct: 1962 gcgcggccgctcttcttctc 1981



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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 369     ccgtcaggctcccggcgccg 388
               ||||||||||||||||||||
Sbjct: 2959586 ccgtcaggctcccggcgccg 2959605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,188,403
Number of Sequences: 3902068
Number of extensions: 2188403
Number of successful extensions: 45791
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45063
Number of HSP's gapped (non-prelim): 726
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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