ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast55f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.7), mRNA Length = 816 Score = 192 bits (97), Expect = 7e-46 Identities = 208/245 (84%) Strand = Plus / Plus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 154 Query: 194 aagctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcg 253 |||||||||| | |||| || ||| ||||| |||||||||||||| | |||||| Sbjct: 155 aagctgaggccgttttcaagggtgttcgcgtggcgatcaagtgcaagaacagcaacggcg 214 Query: 254 agtacgagaccaaggccgtcggagcggtggacaagtccggcgcgttcggcgtgcccctca 313 |||||||||| |||||| ||| | ||| | |||||| |||||||||| |||||||||| Sbjct: 215 agtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcg 274 Query: 314 gcgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccaca 373 || ||||||||| |||| ||||||||||| | ||| | |||||||||||||| |||| Sbjct: 275 cggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcaca 334 Query: 374 gcgcg 378 ||||| Sbjct: 335 gcgcg 339 Score = 40.1 bits (20), Expect = 5.8 Identities = 40/46 (86%), Gaps = 3/46 (6%) Strand = Plus / Plus Query: 55 atgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 |||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 1 atgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 43
>dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G01, full insert sequence Length = 1083 Score = 192 bits (97), Expect = 7e-46 Identities = 208/245 (84%) Strand = Plus / Plus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 152 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 211 Query: 194 aagctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcg 253 |||||||||| | |||| || ||| ||||| |||||||||||||| | |||||| Sbjct: 212 aagctgaggccgttttcaagggtgttcgcgtggcgatcaagtgcaagaacagcaacggcg 271 Query: 254 agtacgagaccaaggccgtcggagcggtggacaagtccggcgcgttcggcgtgcccctca 313 |||||||||| |||||| ||| | ||| | |||||| |||||||||| |||||||||| Sbjct: 272 agtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcg 331 Query: 314 gcgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccaca 373 || ||||||||| |||| ||||||||||| | ||| | |||||||||||||| |||| Sbjct: 332 cggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcaca 391 Query: 374 gcgcg 378 ||||| Sbjct: 392 gcgcg 396 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 55 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 100
>dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E08, full insert sequence Length = 1069 Score = 192 bits (97), Expect = 7e-46 Identities = 208/245 (84%) Strand = Plus / Plus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 137 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 196 Query: 194 aagctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcg 253 |||||||||| | |||| || ||| ||||| |||||||||||||| | |||||| Sbjct: 197 aagctgaggccgttttcaagggtgttcgcgtggcgatcaagtgcaagaacagcaacggcg 256 Query: 254 agtacgagaccaaggccgtcggagcggtggacaagtccggcgcgttcggcgtgcccctca 313 |||||||||| |||||| ||| | ||| | |||||| |||||||||| |||||||||| Sbjct: 257 agtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcg 316 Query: 314 gcgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccaca 373 || ||||||||| |||| ||||||||||| | ||| | |||||||||||||| |||| Sbjct: 317 cggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcaca 376 Query: 374 gcgcg 378 ||||| Sbjct: 377 gcgcg 381 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 40 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 85
>gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-rich protein mRNA, complete cds Length = 1061 Score = 192 bits (97), Expect = 7e-46 Identities = 208/245 (84%) Strand = Plus / Plus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 146 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 205 Query: 194 aagctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcg 253 |||||||||| | |||| || ||| ||||| |||||||||||||| | |||||| Sbjct: 206 aagctgaggccgttttcaagggtgttcgcgtggcgatcaagtgcaagaacagcaacggcg 265 Query: 254 agtacgagaccaaggccgtcggagcggtggacaagtccggcgcgttcggcgtgcccctca 313 |||||||||| |||||| ||| | ||| | |||||| |||||||||| |||||||||| Sbjct: 266 agtacgagacgaaggccaccggcgaggtcggcaagtctggcgcgttcgccgtgcccctcg 325 Query: 314 gcgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccaca 373 || ||||||||| |||| ||||||||||| | ||| | |||||||||||||| |||| Sbjct: 326 cggcggacctcctcggcgacgacggcgagctgaggcagcaatgcttcgcgcagctgcaca 385 Query: 374 gcgcg 378 ||||| Sbjct: 386 gcgcg 390 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 49 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 94
>dbj|AK062288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E04, full insert sequence Length = 981 Score = 159 bits (80), Expect = 9e-36 Identities = 191/228 (83%) Strand = Plus / Plus Query: 151 gtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 ||||||||||||| |||| | | |||||||||||||||||||| || ||||| |||||| Sbjct: 141 gtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgaggcagctttc 200 Query: 211 gcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 ||| ||||| ||||||||||||||||||||| | ||||||||||| | | |||| Sbjct: 201 aaaggtcttcaagtggctgtcaagtgcaagaacagcaggggcgagtacgacaaaatggcc 260 Query: 271 gtcggagcggtggacaagtccggcgcgttcggcgtgcccctcagcgccgacctcctccgc 330 || || |||||||||||||||||| ||| |||| |||||| |||||||||| || || Sbjct: 261 gtggggaaggtggacaagtccggcgccttcagcgtccccctcgccgccgacctcgtcggc 320 Query: 331 gaggacggcgagctcaagcacgactgcttcgcgcagctccacagcgcg 378 |||||||||| ||| ||||| ||||||||||||| ||| ||||||||| Sbjct: 321 gaggacggcgtgctgaagcaggactgcttcgcgcggctgcacagcgcg 368
>ref|NM_194864.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.12), mRNA Length = 675 Score = 127 bits (64), Expect = 3e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 75 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 134 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| | ||||||||||||| | ||||||| Sbjct: 135 agctgaggatgctttcaagaacctccaggtggcgattaagtgcaagaacggcaacggcga 194 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 195 gtacgagagcaaggcc 210
>dbj|AK104236.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G04, full insert sequence Length = 963 Score = 127 bits (64), Expect = 3e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 138 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 197 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| | ||||||||||||| | ||||||| Sbjct: 198 agctgaggatgctttcaagaacctccaggtggcgattaagtgcaagaacggcaacggcga 257 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 258 gtacgagagcaaggcc 273
>dbj|AK061529.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E01, full insert sequence Length = 976 Score = 127 bits (64), Expect = 3e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 138 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 197 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| | ||||||||||||| | ||||||| Sbjct: 198 agctgaggatgctttcaagaacctccaggtggcgattaagtgcaagaacggcaacggcga 257 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 258 gtacgagagcaaggcc 273
>dbj|AK059999.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G07, full insert sequence Length = 963 Score = 127 bits (64), Expect = 3e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 138 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 197 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| | ||||||||||||| | ||||||| Sbjct: 198 agctgaggatgctttcaagaacctccaggtggcgattaagtgcaagaacggcaacggcga 257 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 258 gtacgagagcaaggcc 273
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 58950 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 58891 Query: 194 aagctgaggc 203 |||||||||| Sbjct: 58890 aagctgaggc 58881 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcggagcggtggacaagt 289 |||||||||||||| | |||||||||||||||| |||||| ||| | ||| | ||||| Sbjct: 58564 tcaagtgcaagaacagcaacggcgagtacgagacgaaggccaccggcgaggtcggcaagt 58505 Query: 290 ccggcgcgttcggcgtgcccctcagcgccgacctcctccgcgaggacggcgagctcaagc 349 | |||||||||| |||||||||| || ||||||||| |||| ||||||||||| | || Sbjct: 58504 ctggcgcgttcgccgtgcccctcgcggcggacctcctcggcgacgacggcgagctgaggc 58445 Query: 350 acgactgcttcgcgcagctccacagcgcg 378 | | |||||||||||||| ||||||||| Sbjct: 58444 agcaatgcttcgcgcagctgcacagcgcg 58416 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || |||||||| ||||||||||||| ||||||| |||| ||||||||||| Sbjct: 110996 ggcggcggcgatcgtcgtcgggttggccaagtgcggcgactgctccagcaagaacatgaa 110937 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 102871 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 102812 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| | |||||||||| Sbjct: 110801 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagctaggccgtcgg 110746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 110682 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 110623 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 110622 gtccaagatcgtgc 110609 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 102565 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 102506 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 102505 gtccaagatcgtgc 102492 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatg 192 ||||||||| |||||||||||||| |||| ||||||||||||| Sbjct: 83573 gtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatg 83529 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Minus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 59047 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 59002 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 102684 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 102629
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2877918 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 2877859 Query: 194 aagctgaggc 203 |||||||||| Sbjct: 2877858 aagctgaggc 2877849 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcggagcggtggacaagt 289 |||||||||||||| | |||||||||||||||| |||||| ||| | ||| | ||||| Sbjct: 2877532 tcaagtgcaagaacagcaacggcgagtacgagacgaaggccaccggcgaggtcggcaagt 2877473 Query: 290 ccggcgcgttcggcgtgcccctcagcgccgacctcctccgcgaggacggcgagctcaagc 349 | |||||||||| |||||||||| || ||||||||| |||| ||||||||||| | || Sbjct: 2877472 ctggcgcgttcgccgtgcccctcgcggcggacctcctcggcgacgacggcgagctgaggc 2877413 Query: 350 acgactgcttcgcgcagctccacagcgcg 378 | | |||||||||||||| ||||||||| Sbjct: 2877412 agcaatgcttcgcgcagctgcacagcgcg 2877384 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3010759 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 3010818 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 3010819 agctgaggatgctttc 3010834 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2992821 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 2992762 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 2992761 agctgaggatgctttc 2992746 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2999849 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 2999908 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 2999909 agctgaggatgctttc 2999924 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct: 2996044 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttc 2996095 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 2980129 ggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatgaa 2980070 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 2970245 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagcaaggccgtcgg 2970300 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacat 191 |||||||||||||||||||||| || |||| ||||||||||||| Sbjct: 2961475 gtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 2961432 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 2961307 caggtggcgatcaagtgcaagaacagcgacggcgagtacgagagcaaggccgtcgg 2961252 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 2938879 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 2938820 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || |||||||| ||||||||||||| ||||||| |||| ||||||||||| Sbjct: 2929964 ggcggcggcgatcgtcgtcgggttggccaagtgcggcgactgctccagcaagaacatgaa 2929905 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 2921839 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 2921780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 |||||||||||||||||||||| | |||| |||||||||||||||| Sbjct: 2970070 gtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 2970116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 2996253 caggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 2996304 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 211 gcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||| ||| |||||||| | ||||||||||||| | ||||||||||||||| ||||||| Sbjct: 2992631 gcagacctccaggtggcgattaagtgcaagaacggcaacggcgagtacgagagcaaggcc 2992572 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | | ||||||||||||| |||||||||||| Sbjct: 2946432 caggtggcgatcaagtgcaagaacagcgatggcgagtacgagagcaaggccgtcgg 2946377 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| | |||||||||| Sbjct: 2929769 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagctaggccgtcgg 2929714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatga 193 ||||||||||| ||| ||||||||||||||||||| Sbjct: 2946596 ggccaagtgcggcgagtgcaccaggaagaacatga 2946562 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2938573 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 2938514 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2938513 gtccaagatcgtgc 2938500 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2929650 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 2929591 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2929590 gtccaagatcgtgc 2929577 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2921533 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 2921474 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2921473 gtccaagatcgtgc 2921460 Score = 50.1 bits (25), Expect = 0.006 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2946313 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 2946254 Query: 408 gtcc 411 |||| Sbjct: 2946253 gtcc 2946250 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatg 192 ||||||||| |||||||||||||| |||| ||||||||||||| Sbjct: 2902541 gtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatg 2902497 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggc 269 |||||||||||||| || |||| |||||||||| |||||| Sbjct: 3000296 tcaagtgcaagaacaccaacggtgagtacgagagcaaggc 3000335 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||||||| ||||||||||||||| | | || |||||||||| ||||||| Sbjct: 3010959 caggtggcgatcaagtgcaagaacggcaatggtgagtacgagagcaaggcc 3011009 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 2995974 tcctcggcgtttgcgccgtcctg 2995996 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Minus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 2878015 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 2877970 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 2970404 ccgtgccccgggcaggagccgtccaagatcgtgc 2970437 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 2961148 ccgtgccccgggcaggagccgtccaagatcgtgc 2961115 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacg---cccacggcgagtacgagaccaaggc 269 ||||||||||||||| || |||||||||||||||| ||||| Sbjct: 2979060 tcaagtgcaagaacggcgccgacggcgagtacgagacgaaggc 2979018 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 ctgcttcgcgcagctccacagcgcg 378 ||||||||||||||| ||||||||| Sbjct: 2961185 ctgcttcgcgcagctgcacagcgcg 2961161 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 2938692 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 2938637 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 2921652 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 2921597
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 134 cggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatga 193 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2877869 cggcggcgtccatggtcgtcggattggccaagtgcgccgactgcaccaggaagaacatga 2877810 Query: 194 aagctgaggc 203 |||||||||| Sbjct: 2877809 aagctgaggc 2877800 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcggagcggtggacaagt 289 |||||||||||||| | |||||||||||||||| |||||| ||| | ||| | ||||| Sbjct: 2877483 tcaagtgcaagaacagcaacggcgagtacgagacgaaggccaccggcgaggtcggcaagt 2877424 Query: 290 ccggcgcgttcggcgtgcccctcagcgccgacctcctccgcgaggacggcgagctcaagc 349 | |||||||||| |||||||||| || ||||||||| |||| ||||||||||| | || Sbjct: 2877423 ctggcgcgttcgccgtgcccctcgcggcggacctcctcggcgacgacggcgagctgaggc 2877364 Query: 350 acgactgcttcgcgcagctccacagcgcg 378 | | |||||||||||||| ||||||||| Sbjct: 2877363 agcaatgcttcgcgcagctgcacagcgcg 2877335 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3010680 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 3010739 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 3010740 agctgaggatgctttc 3010755 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2992742 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 2992683 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 2992682 agctgaggatgctttc 2992667 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2999770 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 2999829 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 2999830 agctgaggatgctttc 2999845 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct: 2995965 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttc 2996016 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 2980050 ggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatgaa 2979991 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 2970166 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagcaaggccgtcgg 2970221 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacat 191 |||||||||||||||||||||| || |||| ||||||||||||| Sbjct: 2961396 gtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 2961353 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 2961228 caggtggcgatcaagtgcaagaacagcgacggcgagtacgagagcaaggccgtcgg 2961173 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 2938800 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 2938741 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || |||||||| ||||||||||||| ||||||| |||| ||||||||||| Sbjct: 2929885 ggcggcggcgatcgtcgtcgggttggccaagtgcggcgactgctccagcaagaacatgaa 2929826 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 2921790 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 2921731 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 |||||||||||||||||||||| | |||| |||||||||||||||| Sbjct: 2969991 gtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 2970037 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 2996174 caggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 2996225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 211 gcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||| ||| |||||||| | ||||||||||||| | ||||||||||||||| ||||||| Sbjct: 2992552 gcagacctccaggtggcgattaagtgcaagaacggcaacggcgagtacgagagcaaggcc 2992493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | | ||||||||||||| |||||||||||| Sbjct: 2946353 caggtggcgatcaagtgcaagaacagcgatggcgagtacgagagcaaggccgtcgg 2946298 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| | |||||||||| Sbjct: 2929690 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagctaggccgtcgg 2929635 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatga 193 ||||||||||| ||| ||||||||||||||||||| Sbjct: 2946517 ggccaagtgcggcgagtgcaccaggaagaacatga 2946483 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2938494 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 2938435 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2938434 gtccaagatcgtgc 2938421 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2929571 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 2929512 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2929511 gtccaagatcgtgc 2929498 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2921484 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 2921425 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 2921424 gtccaagatcgtgc 2921411 Score = 50.1 bits (25), Expect = 0.006 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 2946234 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 2946175 Query: 408 gtcc 411 |||| Sbjct: 2946174 gtcc 2946171 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatg 192 ||||||||| |||||||||||||| |||| ||||||||||||| Sbjct: 2902492 gtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatg 2902448 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggc 269 |||||||||||||| || |||| |||||||||| |||||| Sbjct: 3000217 tcaagtgcaagaacaccaacggtgagtacgagagcaaggc 3000256 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||||||| ||||||||||||||| | | || |||||||||| ||||||| Sbjct: 3010880 caggtggcgatcaagtgcaagaacggcaatggtgagtacgagagcaaggcc 3010930 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 2995895 tcctcggcgtttgcgccgtcctg 2995917 Score = 46.1 bits (23), Expect = 0.095 Identities = 43/49 (87%), Gaps = 3/49 (6%) Strand = Plus / Minus Query: 52 gcaatgggggctctgcctcggggtctactggtcctcggcgtttgcgccg 100 ||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 2877966 gcaatgggggctctgccaagggctcta---gtcctcggcgtttgcgccg 2877921 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 2970325 ccgtgccccgggcaggagccgtccaagatcgtgc 2970358 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 2961069 ccgtgccccgggcaggagccgtccaagatcgtgc 2961036 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacg---cccacggcgagtacgagaccaaggc 269 ||||||||||||||| || |||||||||||||||| ||||| Sbjct: 2978981 tcaagtgcaagaacggcgccgacggcgagtacgagacgaaggc 2978939 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 ctgcttcgcgcagctccacagcgcg 378 ||||||||||||||| ||||||||| Sbjct: 2961106 ctgcttcgcgcagctgcacagcgcg 2961082 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 2938613 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 2938558 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 2921603 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 2921548
>ref|NM_194867.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.15), mRNA Length = 690 Score = 119 bits (60), Expect = 8e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 134 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| ||||||||||||||| | | || || Sbjct: 135 agctgaggatgctttcaagaacctccaggtggcgatcaagtgcaagaacggcaatggtga 194 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 195 gtacgagagcaaggcc 210
>dbj|AK062795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C07, full insert sequence Length = 862 Score = 119 bits (60), Expect = 8e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 177 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| ||||||||||||||| | | || || Sbjct: 178 agctgaggatgctttcaagaacctccaggtggcgatcaagtgcaagaacggcaatggtga 237 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 238 gtacgagagcaaggcc 253
>dbj|AK061299.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E05, full insert sequence Length = 928 Score = 119 bits (60), Expect = 8e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 191 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| ||||||||||||||| | | || || Sbjct: 192 agctgaggatgctttcaagaacctccaggtggcgatcaagtgcaagaacggcaatggtga 251 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 252 gtacgagagcaaggcc 267
>dbj|AB055842.1| Oryza sativa OsPRP1 mRNA for proline-rich protein, complete cds Length = 980 Score = 119 bits (60), Expect = 8e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 191 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| |||||||| ||||||||||||||| | | || || Sbjct: 192 agctgaggatgctttcaagaacctccaggtggcgatcaagtgcaagaacggcaatggtga 251 Query: 255 gtacgagaccaaggcc 270 |||||||| ||||||| Sbjct: 252 gtacgagagcaaggcc 267
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 212 caggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||| ||||| ||||||||||||||||||||| | ||||||||||| | | ||||| Sbjct: 7646141 caggtcttcaagtggctgtcaagtgcaagaacagcaggggcgagtacgacaaaatggccg 7646082 Query: 272 tcggagcggtggacaagtccggcgcgttcggcgtgcccctcagcgccgacctcctccgcg 331 | || |||||||||||||||||| ||| |||| |||||| |||||||||| || ||| Sbjct: 7646081 tggggaaggtggacaagtccggcgccttcagcgtccccctcgccgccgacctcgtcggcg 7646022 Query: 332 aggacggcgagctcaagcacgactgcttcgcgcagctccacagcgcg 378 ||||||||| ||| ||||| ||||||||||||| ||| ||||||||| Sbjct: 7646021 aggacggcgtgctgaagcaggactgcttcgcgcggctgcacagcgcg 7645975 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 315 cgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccacag 374 |||||||||||||||||| ||||||||||| | | ||||||||||| ||||||||||| Sbjct: 7647971 cgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccacag 7647912 Query: 375 cgcgcc 380 |||||| Sbjct: 7647911 cgcgcc 7647906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 151 gtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 ||||||||||||| |||| | | |||||||||||||||||||| || ||||| |||||| Sbjct: 7646568 gtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgaggcagctttc 7646509
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 212 caggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||| ||||| ||||||||||||||||||||| | ||||||||||| | | ||||| Sbjct: 69149 caggtcttcaagtggctgtcaagtgcaagaacagcaggggcgagtacgacaaaatggccg 69208 Query: 272 tcggagcggtggacaagtccggcgcgttcggcgtgcccctcagcgccgacctcctccgcg 331 | || |||||||||||||||||| ||| |||| |||||| |||||||||| || ||| Sbjct: 69209 tggggaaggtggacaagtccggcgccttcagcgtccccctcgccgccgacctcgtcggcg 69268 Query: 332 aggacggcgagctcaagcacgactgcttcgcgcagctccacagcgcg 378 ||||||||| ||| ||||| ||||||||||||| ||| ||||||||| Sbjct: 69269 aggacggcgtgctgaagcaggactgcttcgcgcggctgcacagcgcg 69315 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 315 cgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccacag 374 |||||||||||||||||| ||||||||||| | | ||||||||||| ||||||||||| Sbjct: 67319 cgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccacag 67378 Query: 375 cgcgcc 380 |||||| Sbjct: 67379 cgcgcc 67384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 151 gtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 ||||||||||||| |||| | | |||||||||||||||||||| || ||||| |||||| Sbjct: 68722 gtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgaggcagctttc 68781
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 212 caggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||| ||||| ||||||||||||||||||||| | ||||||||||| | | ||||| Sbjct: 7643976 caggtcttcaagtggctgtcaagtgcaagaacagcaggggcgagtacgacaaaatggccg 7643917 Query: 272 tcggagcggtggacaagtccggcgcgttcggcgtgcccctcagcgccgacctcctccgcg 331 | || |||||||||||||||||| ||| |||| |||||| |||||||||| || ||| Sbjct: 7643916 tggggaaggtggacaagtccggcgccttcagcgtccccctcgccgccgacctcgtcggcg 7643857 Query: 332 aggacggcgagctcaagcacgactgcttcgcgcagctccacagcgcg 378 ||||||||| ||| ||||| ||||||||||||| ||| ||||||||| Sbjct: 7643856 aggacggcgtgctgaagcaggactgcttcgcgcggctgcacagcgcg 7643810 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 315 cgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccacag 374 |||||||||||||||||| ||||||||||| | | ||||||||||| ||||||||||| Sbjct: 7645806 cgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccacag 7645747 Query: 375 cgcgcc 380 |||||| Sbjct: 7645746 cgcgcc 7645741 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 151 gtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 ||||||||||||| |||| | | |||||||||||||||||||| || ||||| |||||| Sbjct: 7644403 gtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgaggcagctttc 7644344
>dbj|AK069529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A15, full insert sequence Length = 2225 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 212 caggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||| ||||| ||||||||||||||||||||| | ||||||||||| | | ||||| Sbjct: 1915 caggtcttcaagtggctgtcaagtgcaagaacagcaggggcgagtacgacaaaatggccg 1856 Query: 272 tcggagcggtggacaagtccggcgcgttcggcgtgcccctcagcgccgacctcctccgcg 331 | || |||||||||||||||||| ||| |||| |||||| |||||||||| || ||| Sbjct: 1855 tggggaaggtggacaagtccggcgccttcagcgtccccctcgccgccgacctcgtcggcg 1796 Query: 332 aggacggcgagctcaagcacgactgcttcgcgcagctccacagcgcg 378 ||||||||| ||| ||||| ||||||||||||| ||| ||||||||| Sbjct: 1795 aggacggcgtgctgaagcaggactgcttcgcgcggctgcacagcgcg 1749
>ref|NM_194866.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.14), mRNA Length = 690 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 75 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 134 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 135 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 194 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 195 gtacgagagcaaggc 209
>dbj|AK104765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H08, full insert sequence Length = 1080 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>dbj|AK104622.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H10, full insert sequence Length = 1032 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>dbj|AK104398.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D05, full insert sequence Length = 1032 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>dbj|AK104262.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C07, full insert sequence Length = 1030 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>dbj|AK104235.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F12, full insert sequence Length = 972 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 138 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 197 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 198 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 257 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 258 gtacgagagcaaggc 272
>dbj|AK067147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B06, full insert sequence Length = 1032 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 137 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 196 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 197 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 256 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 257 gtacgagagcaaggc 271
>dbj|AK061567.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F04, full insert sequence Length = 1080 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>dbj|AK059996.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F05, full insert sequence Length = 989 Score = 109 bits (55), Expect = 8e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 135 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 194 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 |||||||| ||||||| ||| || ||||| |||||||||||||| || |||| || Sbjct: 195 agctgaggatgctttcaagaacctccaagtggcgatcaagtgcaagaacaccaacggtga 254 Query: 255 gtacgagaccaaggc 269 |||||||| |||||| Sbjct: 255 gtacgagagcaaggc 269
>ref|NM_194861.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.9), mRNA Length = 636 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 |||||||||||||||||||||| | |||| |||||||||||||||| || ||| |||| Sbjct: 106 gtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaaggcgcaggatgct 165 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaag 267 ||| || || |||||||| ||||||||| ||||| | ||||||||||||||| |||| Sbjct: 166 ttcaagggtctccaggtggcgatcaagtgcaggaacggcgacggcgagtacgagagcaag 225 Query: 268 gccgtcgg 275 |||||||| Sbjct: 226 gccgtcgg 233 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 337 ccgtgccccgggcaggagccgtccaagatcgtgc 370
>ref|NM_194860.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.8), mRNA Length = 621 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 |||||||||||||||||||||| || |||| ||||||||||||| || || ||| |||| Sbjct: 106 gtcgtcggcttggccaagtgcggcggctgctccaggaagaacatcaaggcgcaggatgct 165 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaag 267 ||| || || |||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 166 ttcaagggtctccaggtggcgatcaagtgcaagaacagcgacggcgagtacgagagcaag 225 Query: 268 gccgtcgg 275 |||||||| Sbjct: 226 gccgtcgg 233 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 337 ccgtgccccgggcaggagccgtccaagatcgtgc 370 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 ctgcttcgcgcagctccacagcgcg 378 ||||||||||||||| ||||||||| Sbjct: 300 ctgcttcgcgcagctgcacagcgcg 324
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99181 ggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacatgaa 99240 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 99241 agctgaggatgctttc 99256 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 81243 ggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 81184 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 81183 agctgaggatgctttc 81168 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 88271 ggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatgaa 88330 Query: 195 agctgaggctgctttc 210 |||||||| ||||||| Sbjct: 88331 agctgaggatgctttc 88346 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttc 210 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct: 84466 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttc 84517 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 68551 ggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatgaa 68492 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 58667 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagcaaggccgtcgg 58722 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacat 191 |||||||||||||||||||||| || |||| ||||||||||||| Sbjct: 49897 gtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 49854 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 49729 caggtggcgatcaagtgcaagaacagcgacggcgagtacgagagcaaggccgtcgg 49674 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 27301 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 27242 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || |||||||| ||||||||||||| ||||||| |||| ||||||||||| Sbjct: 18386 ggcggcggcgatcgtcgtcgggttggccaagtgcggcgactgctccagcaagaacatgaa 18327 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 10291 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 10232 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 |||||||||||||||||||||| | |||| |||||||||||||||| Sbjct: 58492 gtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 58538 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 84675 caggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 84726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 211 gcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||| ||| |||||||| | ||||||||||||| | ||||||||||||||| ||||||| Sbjct: 81053 gcagacctccaggtggcgattaagtgcaagaacggcaacggcgagtacgagagcaaggcc 80994 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | | ||||||||||||| |||||||||||| Sbjct: 34854 caggtggcgatcaagtgcaagaacagcgatggcgagtacgagagcaaggccgtcgg 34799 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| ||||||||| ||||| | ||||||||||||||| | |||||||||| Sbjct: 18191 caggtggcgatcaagtgcaggaacggcgacggcgagtacgagagctaggccgtcgg 18136 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatga 193 ||||||||||| ||| ||||||||||||||||||| Sbjct: 35018 ggccaagtgcggcgagtgcaccaggaagaacatga 34984 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 26995 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 26936 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 26935 gtccaagatcgtgc 26922 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 18072 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 18013 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 18012 gtccaagatcgtgc 17999 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 9985 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 9926 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 9925 gtccaagatcgtgc 9912 Score = 50.1 bits (25), Expect = 0.006 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 34735 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 34676 Query: 408 gtcc 411 |||| Sbjct: 34675 gtcc 34672 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 230 tcaagtgcaagaacgcccacggcgagtacgagaccaaggc 269 |||||||||||||| || |||| |||||||||| |||||| Sbjct: 88718 tcaagtgcaagaacaccaacggtgagtacgagagcaaggc 88757 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggcc 270 |||||||| ||||||||||||||| | | || |||||||||| ||||||| Sbjct: 99381 caggtggcgatcaagtgcaagaacggcaatggtgagtacgagagcaaggcc 99431 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 84396 tcctcggcgtttgcgccgtcctg 84418 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 58826 ccgtgccccgggcaggagccgtccaagatcgtgc 58859 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 ccgtgccccgggcaggaaccgtccttgatcgtgc 421 ||||||||||||||||| |||||| |||||||| Sbjct: 49570 ccgtgccccgggcaggagccgtccaagatcgtgc 49537 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Minus Query: 230 tcaagtgcaagaacg---cccacggcgagtacgagaccaaggc 269 ||||||||||||||| || |||||||||||||||| ||||| Sbjct: 67482 tcaagtgcaagaacggcgccgacggcgagtacgagacgaaggc 67440 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 ctgcttcgcgcagctccacagcgcg 378 ||||||||||||||| ||||||||| Sbjct: 49607 ctgcttcgcgcagctgcacagcgcg 49583 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 27114 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 27059 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 220 caggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | |||| | |||||||| ||||||| |||| Sbjct: 10104 caggtggcgatcaagtgcaagaacagcgacggtgtgtacgagagcaaggccatcgg 10049
>ref|NM_194865.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.13), mRNA Length = 690 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 99 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 158 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 159 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 211 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 29 tcctcggcgtttgcgccgtcctg 51
>dbj|AK104542.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B03, full insert sequence Length = 1008 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 144 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 203 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 204 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 256 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 74 tcctcggcgtttgcgccgtcctg 96
>dbj|AK104257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F02, full insert sequence Length = 1010 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 207 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 259 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 77 tcctcggcgtttgcgccgtcctg 99
>dbj|AK072923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146D17, full insert sequence Length = 1015 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 151 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 210 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 211 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 263 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 81 tcctcggcgtttgcgccgtcctg 103
>dbj|AK061576.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G10, full insert sequence Length = 1011 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 207 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 259 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 77 tcctcggcgtttgcgccgtcctg 99
>dbj|AK058887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C09, full insert sequence Length = 1011 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 207 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 259 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 77 tcctcggcgtttgcgccgtcctg 99
>gb|AY105214.1| Zea mays PCO090639 mRNA sequence Length = 919 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 ||||| ||| |||| | |||||||||| |||| |||||||||||||| |||||||| | | Sbjct: 112 gtcgtgggcctggcgaggtgcgccgacagcacgaggaagaacatgaaggctgaggccggt 171 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaag 267 ||| || ||||||||||| |||||||||||||| | |||||||||||||||| ||| Sbjct: 172 ttcaagggtcttcaggtggcgatcaagtgcaagaacagcaacggcgagtacgagacaaag 231 Query: 268 gccgt 272 ||||| Sbjct: 232 gccgt 236
>dbj|AB071178.1| Oryza sativa (japonica cultivar-group) OsPRP2 mRNA for proline-rich protein 2, complete cds Length = 828 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || Sbjct: 99 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 158 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccg 271 |||||||| ||||||||||||||| | | ||||||||||||| |||||||| Sbjct: 159 ccaggtggcgatcaagtgcaagaacggcaatggcgagtacgagagcaaggccg 211 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tcctcggcgtttgcgccgtcctg 105 ||||||||||||||||||||||| Sbjct: 29 tcctcggcgtttgcgccgtcctg 51
>gb|BT017555.1| Zea mays clone EL01N0424H02.c mRNA sequence Length = 827 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 ||||| ||| |||| | |||||||||| |||| |||||||||||||| |||||||| | | Sbjct: 86 gtcgtgggcctggcgaggtgcgccgacagcacgaggaagaacatgaaggctgaggccggt 145 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaag 267 ||| || ||||||||||| ||| |||||||||| | |||||||||||||||| ||| Sbjct: 146 ttcaagggtcttcaggtggcgatcaggtgcaagaacagcaacggcgagtacgagacaaag 205 Query: 268 gccgt 272 ||||| Sbjct: 206 gccgt 210
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 146 tggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctg 205 ||||||||||| | ||||| |||||||||||||||||||||||| |||| || ||||| | Sbjct: 109 tggtcgtcggcctcgccaaatgcgccgactgcaccaggaagaacttgaaggccgaggcgg 168 Query: 206 ctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagacca 265 | ||| || ||| ||||||| |||||||||||||| | | ||||||||||||| || Sbjct: 169 cattcaagggtcttgaggtggcgatcaagtgcaagaacagcaaaggcgagtacgagagca 228 Query: 266 aggcc 270 ||||| Sbjct: 229 aggcc 233
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 146 tggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctg 205 ||||||||||| | ||||| |||||||||||||||||||||||| |||| || ||||| | Sbjct: 109 tggtcgtcggcctcgccaaatgcgccgactgcaccaggaagaacttgaaggccgaggcgg 168 Query: 206 ctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagacca 265 | ||| || ||| ||||||| |||||||||||||| | | ||||||||||||| || Sbjct: 169 cattcaagggtcttgaggtggcgatcaagtgcaagaacagcaaaggcgagtacgagagca 228 Query: 266 aggcc 270 ||||| Sbjct: 229 aggcc 233
>ref|NM_194858.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.6), mRNA Length = 699 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 159 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgctttcgcaggcct 218 ||||||||||| ||| ||||||||||||||||||| || ||| ||||||| || || Sbjct: 135 ggccaagtgcggcgagtgcaccaggaagaacatgatggcgcaggatgctttcaagggtct 194 Query: 219 tcaggtggctgtcaagtgcaagaacgcccacggcgagtacgagaccaaggccgtcgg 275 |||||||| |||||||||||||| | | ||||||||||||| |||||||||||| Sbjct: 195 ccaggtggcgatcaagtgcaagaacagcgatggcgagtacgagagcaaggccgtcgg 251 Score = 50.1 bits (25), Expect = 0.006 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 315 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 374 Query: 408 gtcc 411 |||| Sbjct: 375 gtcc 378
>ref|NM_194857.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.5), mRNA Length = 675 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 87 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 146 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 || ||| ||||||| || || |||||||| |||||||||||||| | |||| | Sbjct: 147 ggcgcaggatgctttcaagggtctccaggtggcgatcaagtgcaagaacagcgacggtgt 206 Query: 255 gtacgagaccaaggccgtcgg 275 |||||||| ||||||| |||| Sbjct: 207 gtacgagagcaaggccatcgg 227 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Plus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 291 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 350 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 351 gtccaagatcgtgc 364
>ref|NM_194855.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.13), mRNA Length = 660 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 72 ggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatgaa 131 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacgcccacggcga 254 || ||| ||||||| || || |||||||| |||||||||||||| | |||| | Sbjct: 132 ggcgcaggatgctttcaagggtctccaggtggcgatcaagtgcaagaacagcgacggtgt 191 Query: 255 gtacgagaccaaggccgtcgg 275 |||||||| ||||||| |||| Sbjct: 192 gtacgagagcaaggccatcgg 212 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Plus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 276 cgactgcttcgcgcagctgcacagcgcggcgagcagcacgccgtgccccgggcaggagcc 335 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 336 gtccaagatcgtgc 349
>dbj|AK059409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C05, full insert sequence Length = 1026 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 315 cgccgacctcctccgcgaggacggcgagctcaagcacgactgcttcgcgcagctccacag 374 |||||||||||||||||| ||||||||||| | | ||||||||||| ||||||||||| Sbjct: 345 cgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccacag 404 Query: 375 cgcgcc 380 |||||| Sbjct: 405 cgcgcc 410
>ref|NM_194863.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.11), mRNA Length = 591 Score = 71.9 bits (36), Expect = 2e-09 Identities = 113/138 (81%), Gaps = 3/138 (2%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 66 ggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatgaa 125 Query: 195 agctgaggctgctttcgcaggccttcaggtggctgtcaagtgcaagaacg---cccacgg 251 || |||| || ||| || || | ||||| ||||||||||||||| || |||| Sbjct: 126 ggccaaggccgccttcaagggtctccgtgtggcgatcaagtgcaagaacggcgccgacgg 185 Query: 252 cgagtacgagaccaaggc 269 |||||||||||| ||||| Sbjct: 186 cgagtacgagacgaaggc 203
>ref|NM_194856.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.14), mRNA Length = 627 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 135 ggcggcgtcaatggtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaa 194 ||||||| | || |||||||| ||||||||||||| ||||||| |||| ||||||||||| Sbjct: 87 ggcggcggcgatcgtcgtcgggttggccaagtgcggcgactgctccagcaagaacatgaa 146 Score = 54.0 bits (27), Expect = 4e-04 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand = Plus / Plus Query: 351 cgactgcttcgcgcagctccacagcgcgcccggc--cac-ccgtgccccgggcaggaacc 407 |||||||||||||||||| ||||||||| | || ||| ||||||||||||||||| || Sbjct: 243 cgactgcttcgcgcagctgcacagcgcgacgagcagcacgccgtgccccgggcaggagcc 302 Query: 408 gtccttgatcgtgc 421 |||| |||||||| Sbjct: 303 gtccaagatcgtgc 316
>ref|NM_194852.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.10), mRNA Length = 906 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 ||||||||| |||||||||||||| |||| ||||||||||||| | || ||| | ||| Sbjct: 94 gtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacgccgagaccgct 153 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacg 244 ||| || ||| ||||||| ||||||||||||||| Sbjct: 154 ttcaagggacttaaggtggcgatcaagtgcaagaacg 190
>dbj|AK071590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100N02, full insert sequence Length = 1219 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 148 gtcgtcggcttggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggctgct 207 ||||||||| |||||||||||||| |||| ||||||||||||| | || ||| | ||| Sbjct: 148 gtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacgccgagaccgct 207 Query: 208 ttcgcaggccttcaggtggctgtcaagtgcaagaacg 244 ||| || ||| ||||||| ||||||||||||||| Sbjct: 208 ttcaagggacttaaggtggcgatcaagtgcaagaacg 244
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 tggtggcggccgtgctcgccga 125 |||||||||||||||||||||| Sbjct: 458851 tggtggcggccgtgctcgccga 458872 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gtacgagaccaaggccgtcgg 275 ||||||||||||||||||||| Sbjct: 2593198 gtacgagaccaaggccgtcgg 2593218
>gb|AC136743.5| Mus musculus chromosome 9, clone RP23-149D5, complete sequence Length = 213343 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 caggccttcaggtggctgtca 232 ||||||||||||||||||||| Sbjct: 3086 caggccttcaggtggctgtca 3066
>gb|AY135692.1| Mus musculus Miwi 2 protein (Miwi2) gene, complete cds Length = 99999 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 caggccttcaggtggctgtca 232 ||||||||||||||||||||| Sbjct: 77420 caggccttcaggtggctgtca 77440
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 ctggtggcggccgtgctcgcc 123 ||||||||||||||||||||| Sbjct: 5519161 ctggtggcggccgtgctcgcc 5519141
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gtcctggtggcggccgtgctcgccg 124 ||||||||||||||||| ||||||| Sbjct: 48923 gtcctggtggcggccgtcctcgccg 48947
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 caggccttcaggtggctgtca 232 ||||||||||||||||||||| Sbjct: 105434 caggccttcaggtggctgtca 105454
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 tcctggtggcggccgtgctcgccg 124 ||||||||||||||||| |||||| Sbjct: 3527192 tcctggtggcggccgtggtcgccg 3527169
>emb|AL135905.6| Human DNA sequence from clone RP5-1148A21 on chromosome 6 Contains a ribosomal protein L7A (RPL7A) pseudogene, the PTP4A1 gene for protein tyrosine phosphatase type IVA member 1 and a CpG island, complete sequence Length = 118439 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 caccaggaagaacatgaaag 196 |||||||||||||||||||| Sbjct: 45564 caccaggaagaacatgaaag 45583
>emb|AJ586804.1| Setaria viridis tua1 gene for alpha tubulin, exons 1-4 Length = 2372 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ccctcagcgccgacctcctc 327 |||||||||||||||||||| Sbjct: 2328 ccctcagcgccgacctcctc 2309
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cttcgcgcagctccacagcg 376 |||||||||||||||||||| Sbjct: 1870653 cttcgcgcagctccacagcg 1870634
>emb|CR749458.1| Homo sapiens mRNA; cDNA DKFZp779M0721 (from clone DKFZp779M0721) Length = 4781 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 caccaggaagaacatgaaag 196 |||||||||||||||||||| Sbjct: 96 caccaggaagaacatgaaag 115
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 cgcagctccacagcgcgcccggcc 385 ||||||||||| |||||||||||| Sbjct: 25699283 cgcagctccacggcgcgcccggcc 25699260
>gb|AF043544.2|AF043544 Pseudomonas sp. TW3 putative transposase TnpA1* (tnpA1*), putative transposase TnpA2* (tnpA2*), NtnU (ntnU), putative alcohol dehydrogenase NtnW (ntnW), 4-nitrobenzaldehyde dehydrogenase NtnC (ntnC), 4-nitrotoluene monooxygenase hydroxylase component NtnMA (ntnM), and reductase component of 4-nitrotoluene monooxygenase NtnMA (ntnA) genes, complete cds; ntnB* pseudogene, partial sequence; 4-nitrobenzyl alcohol dehydrogenase NtnD (ntnD) gene, complete cds; aldH* pseudogene, complete sequence; putative transposase gene, complete cds; and unknown genes Length = 14861 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 cgactgcaccaggaagaacatgaa 194 ||||| |||||||||||||||||| Sbjct: 3828 cgactccaccaggaagaacatgaa 3805
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 cgcagctccacagcgcgcccggcc 385 ||||||||||| |||||||||||| Sbjct: 122728 cgcagctccacggcgcgcccggcc 122705
>dbj|AK110126.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-C01, full insert sequence Length = 2942 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 acctcctccgcgaggacggcgagc 343 ||||| |||||||||||||||||| Sbjct: 2589 acctcatccgcgaggacggcgagc 2612 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,741,282 Number of Sequences: 3902068 Number of extensions: 2741282 Number of successful extensions: 56813 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55884 Number of HSP's gapped (non-prelim): 900 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
