ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YAUB_SCHPO (Q10166) Hypothetical UPF0012 protein C26A3.11 in chr... 42 6e-04
2NIT3_YEAST (P49954) Probable hydrolase NIT3 (EC 3.5.-.-) 36 0.045

>YAUB_SCHPO (Q10166) Hypothetical UPF0012 protein C26A3.11 in chromosome I (EC|
           3.5.-.-)
          Length = 322

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +1

Query: 190 FKVALCQLSVTXXXXXXXXXXXXXXXXXXXXXXXLVLLPEIWNGPYSNDSFPEYAEDIEA 369
           F++ L QL+ T                       +++LPEI+N PY    F +YAE IE 
Sbjct: 44  FRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFNQYAEPIE- 102

Query: 370 GGDAAPSFSMMSDVAR 417
             +++PS+  +S +A+
Sbjct: 103 --ESSPSYQALSSMAK 116



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>NIT3_YEAST (P49954) Probable hydrolase NIT3 (EC 3.5.-.-)|
          Length = 291

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +1

Query: 187 KFKVALCQLSVTXXXXXXXXXXXXXXXXXXXXX---XXLVLLPEIWNGPYSNDSFPEYAE 357
           K KVAL QLS +                          LV+LPE +N PYS D F +Y+E
Sbjct: 10  KIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSE 69

Query: 358 DIEAGGDAAPSFSMMSDVARSLQI 429
            I    + + S   +S++A   +I
Sbjct: 70  VINP-KEPSTSVQFLSNLANKFKI 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,908,970
Number of Sequences: 219361
Number of extensions: 321823
Number of successful extensions: 873
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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