ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P49_STRLI (P06108) Protein p49 44 2e-04
2Y921_MYCBO (P64752) Hypothetical protein Mb0921c 32 0.74
3Y897_MYCTU (P64751) Hypothetical protein Rv0897c/MT0921 32 0.74
4MBA2_ECOLI (P07112) Mobilization protein A 29 4.8
5DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (... 29 4.8
6TRAI2_ECOLI (P22706) Protein traI (DNA helicase I) (EC 3.6.1.-) 29 6.3
7DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular car... 28 8.2

>P49_STRLI (P06108) Protein p49|
          Length = 469

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = +1

Query: 178 DAVVIXXXXXXXXXXXXXXXXXXSVAVLERRGVLGGAAVSESDLVPGFRFSRCS--YLLS 351
           DAVV+                   VAV E +G +GG A +E   +PGFR   CS  + L 
Sbjct: 3   DAVVVGAGPNGLTAAVELARRGFPVAVFEAQGTVGGGARTEELTLPGFRHDPCSAAHPLG 62

Query: 352 LLRPALIRELELERHGLKLLPRSPSSFTPCLDG 450
           +  PA  R L LER+GL+ L        P  DG
Sbjct: 63  INSPA-FRGLPLERYGLEWLHPGLPMAHPFPDG 94



to top

>Y921_MYCBO (P64752) Hypothetical protein Mb0921c|
          Length = 535

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
 Frame = +1

Query: 175 WDAVVIXXXXXXXXXXXXXXXXXXSVAVLERRGVLGGAAVSESDLVPGF-----RFSRCS 339
           +D VV+                   V +LER    GGAAVS    +  F       SR S
Sbjct: 8   FDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVS----IQAFDGVEVALSRYS 63

Query: 340 YLLSLLRPALIRELELERHGLKLLPRSPSSFTP 438
           YL+SLL   ++ +L      ++L  R  SS+TP
Sbjct: 64  YLVSLLPSRIVADLGAP---VRLARRPFSSYTP 93



to top

>Y897_MYCTU (P64751) Hypothetical protein Rv0897c/MT0921|
          Length = 535

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
 Frame = +1

Query: 175 WDAVVIXXXXXXXXXXXXXXXXXXSVAVLERRGVLGGAAVSESDLVPGF-----RFSRCS 339
           +D VV+                   V +LER    GGAAVS    +  F       SR S
Sbjct: 8   FDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVS----IQAFDGVEVALSRYS 63

Query: 340 YLLSLLRPALIRELELERHGLKLLPRSPSSFTP 438
           YL+SLL   ++ +L      ++L  R  SS+TP
Sbjct: 64  YLVSLLPSRIVADLGAP---VRLARRPFSSYTP 93



to top

>MBA2_ECOLI (P07112) Mobilization protein A|
          Length = 708

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -2

Query: 291 GGAAEDAAPLEHGDGAAGSREVGGGR 214
           GG AE  AP   G G AG R  GG R
Sbjct: 298 GGVAESPAPDRGGMGGAGQRVAGGSR 323



to top

>DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (Diglyceride|
           kinase theta) (DGK-theta) (DAG kinase theta)
          Length = 942

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = -2

Query: 279 EDAAPLEHGDGAAGSREVGGGRE 211
           E A P E GDGA GS  VG GRE
Sbjct: 266 EAAEPGEGGDGADGSAAVGPGRE 288



to top

>TRAI2_ECOLI (P22706) Protein traI (DNA helicase I) (EC 3.6.1.-)|
          Length = 1756

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 259 LERRGVLGGAAVSESDLVPGFRFSRCSYLLSLLRPALIRE 378
           L+ +GVLG   V+ + L P +  SR  YL  + RP ++ E
Sbjct: 618 LKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657



to top

>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel|
           gene 3 protein)
          Length = 836

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -2

Query: 291 GGAAEDAAPLEHGDGA--AGSREVGGGREPVVAAADHHR 181
           GG  E   P     G   AGSR  G GRE VVA   H R
Sbjct: 635 GGGPEAGVPGRPAGGGHRAGSRAHGHGREAVVAKPKHKR 673


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,593,640
Number of Sequences: 219361
Number of extensions: 332036
Number of successful extensions: 1414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top