ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Minus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1145 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1086 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1085 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1026 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1025 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 966 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 965 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 906 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 846 Query: 310 ccg 312 ||| Sbjct: 845 ccg 843 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Minus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 834 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 775 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 774 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 715
>ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Plus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1763 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1822 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1823 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1882 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1883 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 1942 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 1943 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 2002 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 2062 Query: 310 ccg 312 ||| Sbjct: 2063 ccg 2065 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2074 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2133 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2134 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2193
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Plus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1700368 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1700427 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1700428 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1700487 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1700488 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 1700547 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 1700548 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 1700607 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700608 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 1700667 Query: 310 ccg 312 ||| Sbjct: 1700668 ccg 1700670 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 1700679 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 1700738 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 1700739 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 1700798
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Plus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42711 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 42770 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 42771 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 42830 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 42831 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 42890 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 42891 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 42950 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42951 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 43010 Query: 310 ccg 312 ||| Sbjct: 43011 ccg 43013 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 43022 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 43081 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 43082 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 43141
>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full insert sequence Length = 1990 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Minus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1145 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1086 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1085 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1026 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1025 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 966 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 965 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 906 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 846 Query: 310 ccg 312 ||| Sbjct: 845 ccg 843 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Minus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 834 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 775 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 774 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 715
>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full insert sequence Length = 3486 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Plus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1764 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1823 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1824 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1883 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1884 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 1943 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 1944 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 2003 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2004 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 2063 Query: 310 ccg 312 ||| Sbjct: 2064 ccg 2066 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2075 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2134 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2135 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2194
>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full insert sequence Length = 3193 Score = 410 bits (207), Expect = e-111 Identities = 279/303 (92%) Strand = Plus / Plus Query: 10 ctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaat 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1763 ctcggcttcaacaccatcgccaccagcgcgacgcactacaatggcatcctggagtacaat 1822 Query: 70 gcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaaagcatc 129 || |||||| ||||||| ||||| ||||||||||| || ||| ||| |||||| | || Sbjct: 1823 gcgcacagcctgtatggattctcgcaggccatcgcgacgcaccaggcgctgcaggggctc 1882 Query: 130 caggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcctacgcc 189 ||||| ||| ||||||||||||||||||| || ||||||||||| || |||||||||||| Sbjct: 1883 cagggcaagcggccgttcatcctgacgcgctctacgttcgtcgggtcgggcgcctacgcc 1942 Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 1943 gcgcactggaccggcgacaacaagggcacctgggagaatctccgctactccatctccacc 2002 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttctac 2062 Query: 310 ccg 312 ||| Sbjct: 2063 ccg 2065 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 330 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2074 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2133 Query: 390 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 449 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2134 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2193
>gb|AY109891.1| Zea mays CL53767_1 mRNA sequence Length = 812 Score = 258 bits (130), Expect = 1e-65 Identities = 263/309 (85%) Strand = Plus / Plus Query: 4 gcccgtctcggcttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggag 63 ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 6 gcccgactcggcttcaacaccatcgcaaccagcgctacacactacaacggcatcctggag 65 Query: 64 tacaatgcccacagcttgtatggcttctcccaggccatcgccactcacaaggggctgcaa 123 |||||||| ||||| ||||||||||||| |||||||| ||||| || | || ||||||| Sbjct: 66 tacaatgcgcacagtctgtatggcttctcgcaggccattgccacgcatacggcgctgcaa 125 Query: 124 agcatccaggggaagaggccgttcatcctgacgcgatccacgttcgtcggctccggcgcc 183 | | ||||||||||||||| |||||||||| || |||||||||||||| || | Sbjct: 126 gggctgcaggggaagaggccggtcatcctgacccgctccacgttcgtcgggtcnnnnncg 185 Query: 184 tacgccgcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatc 243 || ||||||||||||||||| || ||||||||||| ||||| | ||||| ||||| ||| Sbjct: 186 tatgccgcgcactggaccggagataacaagggcacgtgggaaaatctccgttactcgatc 245 Query: 244 tccaccatgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcggg 303 || |||||||||||||| ||||||||||||||||| ||||| ||| | ||||||||||| Sbjct: 246 tcaaccatgctcaactttggcatcttcggcatgcccatggttggctctgacatctgcggt 305 Query: 304 ttctacccg 312 ||||||||| Sbjct: 306 ttctacccg 314 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 347 ggtggatcgagctcggtgcattctacccgttctcaagggaccacgccaacttcgcctcgg 406 ||||||| |||||||| || |||||||| ||||| |||||||| ||||||||||| || Sbjct: 340 ggtggattgagctcggggccttctaccccttctccagggaccatgccaacttcgcgtcac 399 Query: 407 cgaggcaggagctgta 422 |||||||||||||||| Sbjct: 400 cgaggcaggagctgta 415
>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence Length = 1946 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||| || |||||| ||| ||||||||||||||||||||||| | ||| Sbjct: 1188 tccacgttcgtggggtccggccggtacaccgcgcactggaccggcgacaacgccgccacg 1129 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 1128 tgggacgacctccgctactccatcaacaccatgctcagcttcggcctcttcggcattccc 1069 Query: 280 atggtcggcgccgacatctgcgg 302 ||||||||||| ||||||||||| Sbjct: 1068 atggtcggcgctgacatctgcgg 1046 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 389 |||||||| ||||| || |||||| |||| || || |||||||||||| |||||||||| Sbjct: 1026 gaggagctctgcagccgctggatccagcttggcgcgttctacccgttcgcaagggacca 968
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| |||| |||||||||||||||||| | || Sbjct: 27663077 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 27663018 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 27663017 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 27662958 Query: 280 atggtcggcgccgacatctgcgg 302 ||| ||||||||||||||||||| Sbjct: 27662957 atgatcggcgccgacatctgcgg 27662935 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| ||||||||||||||||||||||| | || Sbjct: 27720960 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 27721019 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 27721020 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 27721079 Query: 280 atggtcggcgccgacatctgcgg 302 ||| |||| |||||||||||||| Sbjct: 27721080 atgatcggtgccgacatctgcgg 27721102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| ||||||||| ||||||||||||||| Sbjct: 27662755 gagctgtacctgtgggagtcggtggcgaggtcggcg 27662720 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| |||||| || ||||||||||||||| Sbjct: 27721282 gagctgtacctgtgggaatcggtggcgaggtcggcg 27721317 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 15172657 gagtccgtggcgaggtcggcg 15172677 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ttctacccgttctcaagggaccac 390 |||||||||||||| ||||||||| Sbjct: 27721234 ttctacccgttctcgagggaccac 27721257 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggc 449 |||||||||||||||||||| Sbjct: 15172601 gagtccgtggcgaggtcggc 15172620
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| |||| |||||||||||||||||| | || Sbjct: 12332 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 12273 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 12272 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 12213 Query: 280 atggtcggcgccgacatctgcgg 302 ||| ||||||||||||||||||| Sbjct: 12212 atgatcggcgccgacatctgcgg 12190 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| ||||||||||||||||||||||| | || Sbjct: 70215 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 70274 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 70275 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 70334 Query: 280 atggtcggcgccgacatctgcgg 302 ||| |||| |||||||||||||| Sbjct: 70335 atgatcggtgccgacatctgcgg 70357 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| ||||||||| ||||||||||||||| Sbjct: 12010 gagctgtacctgtgggagtcggtggcgaggtcggcg 11975 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| |||||| || ||||||||||||||| Sbjct: 70537 gagctgtacctgtgggaatcggtggcgaggtcggcg 70572 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ttctacccgttctcaagggaccac 390 |||||||||||||| ||||||||| Sbjct: 70489 ttctacccgttctcgagggaccac 70512
>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full insert sequence Length = 2829 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| |||| |||||||||||||||||| | || Sbjct: 1654 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 1713 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 1714 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 1773 Query: 280 atggtcggcgccgacatctgcgg 302 ||| ||||||||||||||||||| Sbjct: 1774 atgatcggcgccgacatctgcgg 1796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| ||||||||| ||||||||||||||| Sbjct: 1900 gagctgtacctgtgggagtcggtggcgaggtcggcg 1935 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaaggga 386 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||| Sbjct: 1816 gaggagctctgcagccgctggattcagcttggcgcgttctacccgttctcgaggga 1871
>gb|AF448201.1| Pinus pinaster putative alpha-xylosidase (XYL1) mRNA, complete cds Length = 2881 Score = 109 bits (55), Expect = 8e-21 Identities = 103/119 (86%) Strand = Plus / Plus Query: 190 gcgcactggaccggcgacaacaagggcacctgggaggacctccggtactccatctccacc 249 ||||||||||| || |||||||| | ||| |||||||| ||||| ||||| ||||| ||| Sbjct: 1666 gcgcactggacgggagacaacaaagccacttgggaggatctccgctactcaatctcgacc 1725 Query: 250 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttcta 308 || |||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1726 atactcaacttcggcatgttcgggatgcccatggtgggcgctgacatctgcggcttcta 1784 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 16 ttcaacaccatcgccaccagcgccgtgcactacaatggcatcctggagtacaatgcccac 75 ||||| ||||||||||||||| |||| |||||||| ||| |||| |||||| | |||||| Sbjct: 1492 ttcaagaccatcgccaccagctccgtccactacaacggcgtcctcgagtacgacgcccac 1551 Query: 76 agcttgtatggcttctcccaggccatcgccactcacaagg 115 ||| | |||||||| || |||||||||||||| ||||||| Sbjct: 1552 agcctctatggcttatcgcaggccatcgccacgcacaagg 1591
>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds Length = 7113 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||| ||||||||||||||| ||| |||| |||||||| ||||||||| | ||| Sbjct: 6037 tccaccttcgtcggctccggccggtacaccgctcactggactggcgacaacgccgccacg 6096 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 |||| ||||| || ||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 6097 tggggcgacctgcgctactccatcaacaccatgctcagcttcggcctcttcggcatgccc 6156 Query: 280 atggtcggcgccgacatctgcgg 302 ||| ||||||||||||||||||| Sbjct: 6157 atgatcggcgccgacatctgcgg 6179 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 390 |||||||| ||| ||||||||||| ||||||| || |||||||| ||||| ||||||||| Sbjct: 6199 gaggagctctgcggtcggtggatccagctcggcgccttctaccccttctcgagggaccac 6258
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| ||||||||||||||||||||||| | || Sbjct: 23469 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 23528 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 23529 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 23588 Query: 280 atggtcggcgccgacatctgcgg 302 ||| |||| |||||||||||||| Sbjct: 23589 atgatcggtgccgacatctgcgg 23611 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| |||||| || ||||||||||||||| Sbjct: 23791 gagctgtacctgtgggaatcggtggcgaggtcggcg 23826 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ttctacccgttctcaagggaccac 390 |||||||||||||| ||||||||| Sbjct: 23743 ttctacccgttctcgagggaccac 23766
>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full insert sequence Length = 2804 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| ||||||||||||||||||||||| | || Sbjct: 1632 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 1691 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 1692 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 1751 Query: 280 atggtcggcgccgacatctgcgg 302 ||| |||| |||||||||||||| Sbjct: 1752 atgatcggtgccgacatctgcgg 1774 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| |||||| || ||||||||||||||| Sbjct: 1878 gagctgtacctgtgggaatcggtggcgaggtcggcg 1913 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 390 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||||||| Sbjct: 1794 gaggagctctgcagccgatggattcagcttggcgcgttctacccgttctcgagggaccac 1853
>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full insert sequence Length = 2873 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 160 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggcgacaacaagggcacc 219 ||||||||||||||||||||| ||| ||||||||||||||||||||||| | || Sbjct: 1700 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 1759 Query: 220 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 279 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 1760 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 1819 Query: 280 atggtcggcgccgacatctgcgg 302 ||| |||| |||||||||||||| Sbjct: 1820 atgatcggtgccgacatctgcgg 1842 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 415 gagctgtaccagtgggagtccgtggcgaggtcggcg 450 |||||||||| |||||| || ||||||||||||||| Sbjct: 1946 gagctgtacctgtgggaatcggtggcgaggtcggcg 1981 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 390 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||||||| Sbjct: 1862 gaggagctctgcagccgatggattcagcttggcgcgttctacccgttctcgagggaccac 1921
>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds Length = 2738 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 226 gacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtc 285 ||||| || ||||||||| ||||||||||| ||||||| ||||||||||||| ||| || Sbjct: 1662 gacctgcgctactccatcaacaccatgctcagcttcggcctcttcggcatgcccatgatc 1721 Query: 286 ggcgccgacatctgcgggttc 306 ||||||||||||||||||||| Sbjct: 1722 ggcgccgacatctgcgggttc 1742 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 331 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 390 |||||||| ||| ||||||||||| ||||||| || |||||||| ||||| ||||||||| Sbjct: 1758 gaggagctctgcggtcggtggatccagctcggagccttctaccccttctcgagggaccac 1817
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 catgccgatggtcggcgccgaca 295 ||||||||||||||||||||||| Sbjct: 901388 catgccgatggtcggcgccgaca 901410
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 ccaacttcgcctcggcgaggca 413 |||||||||||||||||||||| Sbjct: 11607369 ccaacttcgcctcggcgaggca 11607390
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 ccaacttcgcctcggcgaggca 413 |||||||||||||||||||||| Sbjct: 171027 ccaacttcgcctcggcgaggca 171048
>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1272H04 Length = 87113 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 ccaacttcgcctcggcgaggca 413 |||||||||||||||||||||| Sbjct: 52741 ccaacttcgcctcggcgaggca 52762
>dbj|AK121178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083G22, full insert sequence Length = 3866 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 ccaacttcgcctcggcgaggca 413 |||||||||||||||||||||| Sbjct: 109 ccaacttcgcctcggcgaggca 130
>dbj|AK073416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040D17, full insert sequence Length = 3852 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 ccaacttcgcctcggcgaggca 413 |||||||||||||||||||||| Sbjct: 109 ccaacttcgcctcggcgaggca 130
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 2141142 gagtccgtggcgaggtcggcg 2141162
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 cggctccggcgcctacgccgcgcac 195 |||| |||||||||||||||||||| Sbjct: 2564269 cggcgccggcgcctacgccgcgcac 2564245 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgctggaggagctgtg 341 |||||||||||||||||||| Sbjct: 3359149 ccgccgctggaggagctgtg 3359168
>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015G09 Length = 140893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 47171 gagtccgtggcgaggtcggcg 47191 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggc 449 |||||||||||||||||||| Sbjct: 47115 gagtccgtggcgaggtcggc 47134
>dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0034G14 Length = 154120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 151977 gagtccgtggcgaggtcggcg 151997 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggc 449 |||||||||||||||||||| Sbjct: 151921 gagtccgtggcgaggtcggc 151940
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 gcttctcccaggccatcgcca 106 ||||||||||||||||||||| Sbjct: 567456 gcttctcccaggccatcgcca 567476
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 2141086 gagtccgtggcgaggtcggcg 2141106
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagtccgtggcgaggtcggcg 450 ||||||||||||||||||||| Sbjct: 23366 gagtccgtggcgaggtcggcg 23386
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cttcggcatgccgatggtcg 286 |||||||||||||||||||| Sbjct: 1947843 cttcggcatgccgatggtcg 1947824
>gb|AY532606.1| Rock bream iridovirus strain RBIV-KOR-TY1 from South Korea, complete genome Length = 112080 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggccaagccaccgccgctg 330 |||||||||||||||||||| Sbjct: 82016 cggccaagccaccgccgctg 81997
>ref|XM_362264.1| Magnaporthe grisea 70-15 hypothetical protein (MG04709.4) partial cds Length = 4515 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gctcaacttcggcatcttcg 271 |||||||||||||||||||| Sbjct: 2740 gctcaacttcggcatcttcg 2721
>ref|XM_451809.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06116g predicted mRNA Length = 3156 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctcaacttcggcatcttcgg 272 |||||||||||||||||||| Sbjct: 2139 ctcaacttcggcatcttcgg 2158
>gb|AY894343.1| Orange-spotted grouper iridovirus, complete genome Length = 112636 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggccaagccaccgccgctg 330 |||||||||||||||||||| Sbjct: 82396 cggccaagccaccgccgctg 82377
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctcaacttcggcatcttcgg 272 |||||||||||||||||||| Sbjct: 545157 ctcaacttcggcatcttcgg 545176
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tcggcatcttcggcatgccg 279 |||||||||||||||||||| Sbjct: 64739 tcggcatcttcggcatgccg 64758
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cggctccggcgcctacgccg 190 |||||||||||||||||||| Sbjct: 5029558 cggctccggcgcctacgccg 5029577
>ref|XM_574839.1| PREDICTED: Rattus norvegicus hexosaminidase B (predicted) (Hexb_predicted), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 acaccatcgccaccagcgcc 39 |||||||||||||||||||| Sbjct: 61 acaccatcgccaccagcgcc 42
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ggcgcctacgccgcgcactggacc 201 ||||||| |||||||||||||||| Sbjct: 7625633 ggcgcctgcgccgcgcactggacc 7625610 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tcaacaccatcgccaccagcgccg 40 |||||||||| ||||||||||||| Sbjct: 5412208 tcaacaccatggccaccagcgccg 5412185
>emb|Y00407.1|GGCALB Chicken conalbumin (ovotransferrin) gene and flanking regions Length = 11068 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gggcacctgggaggacctcc 232 |||||||||||||||||||| Sbjct: 1519 gggcacctgggaggacctcc 1500
>gb|BC079376.1| Rattus norvegicus hexosaminidase B, mRNA (cDNA clone MGC:94872 IMAGE:7110247), complete cds Length = 1907 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 acaccatcgccaccagcgcc 39 |||||||||||||||||||| Sbjct: 135 acaccatcgccaccagcgcc 116
>ref|NM_001011946.1| Rattus norvegicus hexosaminidase B (Hexb), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 acaccatcgccaccagcgcc 39 |||||||||||||||||||| Sbjct: 135 acaccatcgccaccagcgcc 116
>gb|M12898.1|RABATPAA Rabbit Ca2+ ATPase mRNA, complete cds Length = 3317 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 accggcgacaacaagggcac 218 |||||||||||||||||||| Sbjct: 1954 accggcgacaacaagggcac 1973 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,775,857 Number of Sequences: 3902068 Number of extensions: 2775857 Number of successful extensions: 58205 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57435 Number of HSP's gapped (non-prelim): 760 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
