>LBR_MOUSE (Q3U9G9) Lamin-B receptor (Integral nuclear envelope inner membrane|
           protein)
          Length = 626

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 387 LDSSPSKRRGEIDLSRA-SRGGEPSRNPRGS 298
           + SSPS+RRG    SR+ SR   P R P+GS
Sbjct: 68  ISSSPSRRRGSRSRSRSRSRSRSPGRAPKGS 98

>MST1_SCHPO (O94446) Protein mst1|
          Length = 463

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 317 DGSPPRLARERSISPRRFEGELSSHRGEIRRIRDDNNI 430
           D  P  L++E+ +   RF G +  +  EI RIR+ N I
Sbjct: 150 DHKPESLSKEQEVERLRFSGSMVQNPHEIARIRNINKI 187

>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)|
          Length = 1428

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 216 QLPASRYRRSIKG-YKWQGGTA*AASTMRNHEDFVMVLLLDLHEKD---LSHHVASRESC 383
           +LP + ++  + G   W  G       M NH D+ MVL  DL  ++   L+H V S    
Sbjct: 337 KLPRASHKAVVNGNIMWVVG-----GYMFNHSDYSMVLAYDLTSREWLPLNHSVNS---- 387

Query: 384 LATVVRYGESV 416
              VVRYG S+
Sbjct: 388 --VVVRYGHSL 396

>ATRN_RAT (Q99J86) Attractin precursor (Zitter protein)|
          Length = 1432

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 216 QLPASRYRRSIKG-YKWQGGTA*AASTMRNHEDFVMVLLLDLHEKD---LSHHVASRESC 383
           +LP + ++  + G   W  G       M NH D+ MVL  DL  ++   L+H V S    
Sbjct: 341 KLPRASHKAVVNGNIMWVVG-----GYMFNHSDYSMVLAYDLASREWLSLNHSVNS---- 391

Query: 384 LATVVRYGESV 416
              VVRYG S+
Sbjct: 392 --VVVRYGHSL 400

>Y1317_METCA (Q609B8) UPF0090 protein MCA1317|
          Length = 150

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 320 GSPPRLARERSIS-PRRFEGELSSHRGEIRRIRDDNNI 430
           G   RL   RS+   RRF+GE++  RG++  + DDN +
Sbjct: 94  GRRVRLQTLRSLDGQRRFKGEIAGVRGDVIDLEDDNGL 131

>TYSY_RHOBA (Q7UID0) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 264

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 370 EATW*DRSFSCKSRRRTITKSSWFLIVLAAYAVPPCHL 257
           +  W +       R R +  S+W +  +   A+PPCHL
Sbjct: 111 QIAWVENEIRTNPRSRRLVVSAWNVADVPKMALPPCHL 148


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,833,874
Number of Sequences: 219361
Number of extensions: 942963
Number of successful extensions: 2668
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)