>ref|XM_482515.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1448

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 254 ctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggattt 313
           |||||||||||||| || |||||||||   ||  | |||||||| ||||  |||||||||
Sbjct: 320 ctataaatggcaggaagacaccgcatacctcgtgaatactatgatgaacgtcgaggattt 379

                                                                       
Query: 314 cgtgatggttctcctcctcgacttgcacgagaaagatctatctcaccacgtcgcttcgag 373
           ||||||||  | || |||| |||||| |||| |||  | ||||| ||||||||||| |||
Sbjct: 380 cgtgatggccccccacctccacttgctcgagcaaggcccatctctccacgtcgcttggag 439

                                                             
Query: 374 ggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa 423
           |  ||||||||||||| ||||| |||||| || ||||||| |||||||||
Sbjct: 440 gaggagctgtctagccgccgtgctgagatgcgcagaatccatgatgacaa 489

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                            
Query: 254      ctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggattt 313
                |||||||||||||| || |||||||||   ||  | |||||||| ||||  |||||||||
Sbjct: 20785949 ctataaatggcaggaagacaccgcatacctcgtgaatactatgatgaacgtcgaggattt 20786008

                                                                            
Query: 314      cgtgatggttctcctcctcgacttgcacgagaaagatctatctcaccacgtcgcttcgag 373
                ||||||||  | || |||| |||||| |||| |||  | ||||| ||||||||||| |||
Sbjct: 20786009 cgtgatggccccccacctccacttgctcgagcaaggcccatctctccacgtcgcttggag 20786068

                                                                  
Query: 374      ggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa 423
                |  ||||||||||||| ||||| |||||| || ||||||| |||||||||
Sbjct: 20786069 gaggagctgtctagccgccgtgctgagatgcgcagaatccatgatgacaa 20786118

>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                         
Query: 254   ctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggattt 313
             |||||||||||||| || |||||||||   ||  | |||||||| ||||  |||||||||
Sbjct: 17082 ctataaatggcaggaagacaccgcatacctcgtgaatactatgatgaacgtcgaggattt 17141

                                                                         
Query: 314   cgtgatggttctcctcctcgacttgcacgagaaagatctatctcaccacgtcgcttcgag 373
             ||||||||  | || |||| |||||| |||| |||  | ||||| ||||||||||| |||
Sbjct: 17142 cgtgatggccccccacctccacttgctcgagcaaggcccatctctccacgtcgcttggag 17201

                                                               
Query: 374   ggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa 423
             |  ||||||||||||| ||||| |||||| || ||||||| |||||||||
Sbjct: 17202 gaggagctgtctagccgccgtgctgagatgcgcagaatccatgatgacaa 17251

>dbj|AK070561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G06, full
           insert sequence
          Length = 1449

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 139/171 (81%), Gaps = 1/171 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggattt 313
           |||||||||||||| || |||||||||   ||  | |||||||| ||||  |||||||||
Sbjct: 321 ctataaatggcaggaagacaccgcatacctcgtgaatactatgatgaacgtcgaggattt 380

                                                                       
Query: 314 cgtgatggttctcct-cctcgacttgcacgagaaagatctatctcaccacgtcgcttcga 372
           ||||||||  | ||  ||||  ||||| |||| |||  | ||||| ||||||||||| ||
Sbjct: 381 cgtgatggcccccccacctccgcttgctcgagcaaggcccatctctccacgtcgcttgga 440

                                                              
Query: 373 gggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa 423
           ||  ||||||||||||| ||||| |||||| || ||||||| |||||||||
Sbjct: 441 ggaggagctgtctagccgccgtgctgagatgcgcagaatccatgatgacaa 491

>gb|BT017924.1| Zea mays clone EL01N0519E08.c mRNA sequence
          Length = 1189

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 156/197 (79%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 252 ggctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggat 311
           |||||||||||||||| ||||||||   |  ||| || ||| |||| ||||| |||||||
Sbjct: 204 ggctataaatggcaggaaggcaccgggcaccccgacaataccatgatgaacctcgaggat 263

                                                                       
Query: 312 ttcgtgatggttctcctcctcgacttgcacgagaaagatctatctcaccacgtcgcttcg 371
             ||||||||| | || |||| |||| |||||  |||| || ||||||| |||||| | |
Sbjct: 264 accgtgatggtccaccacctccacttccacgaccaagacctctctcaccgcgtcgcatgg 323

                                                                       
Query: 372 agggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa-caacatc 430
             |  || |||||||| | ||||| |||||| || ||||||| ||| ||||| || | ||
Sbjct: 324 cagaggaactgtctaggcgccgtgctgagatccgtagaatccatgaggacaatcagcgtc 383

                            
Query: 431 tggtggatgaaattgtt 447
           ||| |||||||||||||
Sbjct: 384 tggcggatgaaattgtt 400

>gb|AY105068.1| Zea mays PCO082790 mRNA sequence
          Length = 1366

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 156/197 (79%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 252 ggctataaatggcagggaggcaccgcataagccgccagtactatgaggaaccacgaggat 311
           |||||||||||||||| ||||||||   |  ||| || ||| |||| ||||| |||||||
Sbjct: 228 ggctataaatggcaggaaggcaccgggcaccccgacaataccatgatgaacctcgaggat 287

                                                                       
Query: 312 ttcgtgatggttctcctcctcgacttgcacgagaaagatctatctcaccacgtcgcttcg 371
             ||||||||| | || |||| |||| |||||  |||| || ||||||| |||||| | |
Sbjct: 288 accgtgatggtccaccacctccacttccacgaccaagacctctctcaccgcgtcgcatgg 347

                                                                       
Query: 372 agggagagctgtctagccaccgtggtgagatacggagaatccgtgatgacaa-caacatc 430
             |  || |||||||| | ||||| |||||| || ||||||| ||| ||||| || | ||
Sbjct: 348 cagaggaactgtctaggcgccgtgctgagatccgtagaatccatgaggacaatcagcgtc 407

                            
Query: 431 tggtggatgaaattgtt 447
           ||| |||||||||||||
Sbjct: 408 tggcggatgaaattgtt 424

>gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, complete sequence
          Length = 185339

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 162    ccctccccactgctcctccctcc 184
              |||||||||||||||||||||||
Sbjct: 100617 ccctccccactgctcctccctcc 100639

>ref|XM_427878.1| PREDICTED: Gallus gallus similar to transmembrane protein 2
           (LOC430319), partial mRNA
          Length = 605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  tccgacacccgccgccacgcc 41
           |||||||||||||||||||||
Sbjct: 202 tccgacacccgccgccacgcc 222

>gb|AC008119.6| Homo sapiens 12 BAC RP11-951I11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   gatctattaagggctataaatggca 265
             ||||||||||||||| |||||||||
Sbjct: 79594 gatctattaagggctctaaatggca 79618

>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04,
             complete sequence
          Length = 164567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    cccgccgccacgcccgcgccc 48
             |||||||||||||||||||||
Sbjct: 30050 cccgccgccacgcccgcgccc 30030

>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0082N11, from chromosome 10, complete sequence
          Length = 183345

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     cccgccgccacgcccgcgccc 48
              |||||||||||||||||||||
Sbjct: 120748 cccgccgccacgcccgcgccc 120728

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       cccgccgccacgcccgcgccc 48
                |||||||||||||||||||||
Sbjct: 28963392 cccgccgccacgcccgcgccc 28963372

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 28      cccgccgccacgcccgcgccc 48
               |||||||||||||||||||||
Sbjct: 7486884 cccgccgccacgcccgcgccc 7486864

>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   cctccccactgctcctccctc 183
             |||||||||||||||||||||
Sbjct: 56495 cctccccactgctcctccctc 56475

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 28      cccgccgccacgcccgcgccc 48
               |||||||||||||||||||||
Sbjct: 7491083 cccgccgccacgcccgcgccc 7491063

>gb|AC118733.8| Mus musculus chromosome 10, clone RP24-170A20, complete sequence
          Length = 188335

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 161    cccctccccactgctcctccctcc 184
              ||||||||||| ||||||||||||
Sbjct: 154105 cccctccccacagctcctccctcc 154082

>gb|AC125254.9| Mus musculus chromosome 9, clone RP24-156I15, complete sequence
          Length = 161503

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     cgcccgcgcccctgcgcggc 57
              ||||||||||||||||||||
Sbjct: 124287 cgcccgcgcccctgcgcggc 124306

>emb|AL021578.4|HS453C12 Human DNA sequence from clone RP3-453C12 on chromosome 20q12-13.12
             Contains the MATN4 gene for matrilin 4, the RBPSUHL gene
             for recombining binding protein suppressor of hairless
             (Drosophila)-like, the SDC4 (syndecan 4 (amphiglycan,
             ryudocan)) gene, the C20orf169 gene for a novel protein
             similar to Drosophila CG11753, the C20orf10 gene for p53
             response element (clg01), the C20orf35 gene for
             uncharacterized hypothalamus protein, the C20orf10 gene,
             the PIGT gene for phosphatidyl inositol glycan class T, an
             NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
             (NDUFB4) pseudogene and CpG islands, complete sequence
          Length = 147620

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    gacacccgccgccacgcccg 43
             ||||||||||||||||||||
Sbjct: 34900 gacacccgccgccacgcccg 34919

>gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosome 17, complete
             sequence
          Length = 161075

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   cccctccccactgctcctccctcc 184
             ||||||||| ||||||||||||||
Sbjct: 95679 cccctcccccctgctcctccctcc 95702

>ref|XM_683851.1| PREDICTED: Danio rerio similar to KIAA0562 protein (LOC560451),
           mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 ggactcaggcagcatgtctc 468
           ||||||||||||||||||||
Sbjct: 180 ggactcaggcagcatgtctc 161

>gb|AF314058.1|AF314058 Homo sapiens chromosome 20 clone GS1-430E01 map 20q12-q13.12, complete
              sequence
          Length = 189656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     gacacccgccgccacgcccg 43
              ||||||||||||||||||||
Sbjct: 150941 gacacccgccgccacgcccg 150922

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      ccgccgccacgcccgcgccc 48
               ||||||||||||||||||||
Sbjct: 1718086 ccgccgccacgcccgcgccc 1718067

>gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decarboxylase-like protein,
             cysteine dioxygenase-like protein, putative histidine
             protein kinase (hpkA), putative serine/threonine protein
             kinase (pknD1), putative histidine protein kinase (espA),
             putative membrane protein (espB), putative
             serine/threonine protein kinase (pknD2), putative serine
             protease DO-like precursor (htrA), and putative response
             regulator genes, complete cds; and unknown genes
          Length = 18424

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ccgccgccacgcccgcgccc 48
             ||||||||||||||||||||
Sbjct: 10359 ccgccgccacgcccgcgccc 10340

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cccgccgccacgcccgcgcc 47
              ||||||||||||||||||||
Sbjct: 325101 cccgccgccacgcccgcgcc 325082

>emb|CR352301.7| Zebrafish DNA sequence from clone CH211-147A11 in linkage group 8,
             complete sequence
          Length = 176256

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   ggactcaggcagcatgtctc 468
             ||||||||||||||||||||
Sbjct: 10944 ggactcaggcagcatgtctc 10925

>emb|CT573022.8| Mouse DNA sequence from clone RP23-324N15 on chromosome 14, complete
             sequence
          Length = 54453

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   cctccccactgctcctccct 182
             ||||||||||||||||||||
Sbjct: 21417 cctccccactgctcctccct 21398


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,404,263
Number of Sequences: 3902068
Number of extensions: 3404263
Number of successful extensions: 63343
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62833
Number of HSP's gapped (non-prelim): 506
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)