ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 396 bits (200), Expect = e-107 Identities = 308/344 (89%), Gaps = 9/344 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 25 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 84 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 85 ctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatc 144 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||||| ||| |||||||| || ||||||||||| || ||| Sbjct: 145 tttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcatt 204 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 |||||| || |||||||| |||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 205 ggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggat 264 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||||||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 265 gcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtg 324 Query: 434 gcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 |||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 325 gcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 368
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 396 bits (200), Expect = e-107 Identities = 308/344 (89%), Gaps = 9/344 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 124 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 183 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 184 ctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatc 243 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||||| ||| |||||||| || ||||||||||| || ||| Sbjct: 244 tttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcatt 303 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 |||||| || |||||||| |||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 304 ggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggat 363 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||||||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 364 gcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtg 423 Query: 434 gcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 |||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 424 gcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 467
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 396 bits (200), Expect = e-107 Identities = 308/344 (89%), Gaps = 9/344 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 174 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 233 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 234 ctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatc 293 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||||| ||| |||||||| || ||||||||||| || ||| Sbjct: 294 tttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcatt 353 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 |||||| || |||||||| |||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 354 ggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggat 413 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||||||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 414 gcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtg 473 Query: 434 gcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 |||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 474 gcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 517
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 396 bits (200), Expect = e-107 Identities = 308/344 (89%), Gaps = 9/344 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 166 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 225 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 226 ctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatc 285 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||||| ||| |||||||| || ||||||||||| || ||| Sbjct: 286 tttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcatt 345 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 |||||| || |||||||| |||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 346 ggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggat 405 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||||||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 406 gcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtg 465 Query: 434 gcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 |||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 466 gcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 509
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 396 bits (200), Expect = e-107 Identities = 308/344 (89%), Gaps = 9/344 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 174 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 233 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 234 ctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatc 293 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||||| ||| |||||||| || ||||||||||| || ||| Sbjct: 294 tttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcatt 353 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 |||||| || |||||||| |||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 354 ggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggat 413 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||||||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 414 gcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtg 473 Query: 434 gcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 |||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 474 gcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 517
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 359 bits (181), Expect = 5e-96 Identities = 294/333 (88%), Gaps = 8/333 (2%) Strand = Plus / Minus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1022 tacgcggtggggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 963 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 || || || || ||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 962 ctgcagggcaagtacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatc 903 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 902 tttgacaaaacccctcatgttcataaagacgcatttgttgctccaagtgcatcccttatt 843 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 ||||||||| ||||||| ||| |||| |||||||| || |||||||||||||| ||| Sbjct: 842 ggtgatgttcaagttgggccaggagcttccatttggtatgggtgcgtcttaagaggggat 783 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||| | | | |||||||||||||||||||||| ||||||| |||||| Sbjct: 782 gcaaacaacatacaaattggatctgggaccaatatacaagacaattctcttgtgcatgtg 723 Query: 434 gcaaaatctaatctaagtgggaaagtctttcca 466 || |||||||||||||||||||||||||||||| Sbjct: 722 gctaaatctaatctaagtgggaaagtctttcca 690
>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence Length = 1060 Score = 319 bits (161), Expect = 5e-84 Identities = 289/333 (86%), Gaps = 8/333 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 103 tacgcggtgggattctggatccgggagaccggtcaggccctcgatcgcctcggctgccgc 162 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 || || || || ||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 163 ctgcagggcaagtacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatc 222 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| |||| |||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 223 tttgacaaatccccacatgttcatagggatgcatttgttgctccaagtgcatcccttatt 282 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 ||||||||| |||| || |||| |||| |||||||| || |||||||||||||| || Sbjct: 283 ggtgatgttcaagtcgggcaaggagcttccatttggtatgggtgcgtcttaagaggggac 342 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | ||| | | | |||||||||||||||||||||| ||||||| |||||| Sbjct: 343 gcaaacaacatacaaattggatctgggaccaatatacaagacaattctcttgtgcatgtg 402 Query: 434 gcaaaatctaatctaagtgggaaagtctttcca 466 || |||||||||||||||||||||||||||||| Sbjct: 403 gctaaatctaatctaagtgggaaagtctttcca 435
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 295 bits (149), Expect = 7e-77 Identities = 286/333 (85%), Gaps = 8/333 (2%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 ||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 147 tacgcggtgggattctggatccgggagactggccaggccctcgaccgcctgggctgccgc 206 Query: 202 ctccaagggaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatc 261 || || || || ||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 207 ctgcagggcaagtacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatc 266 Query: 262 tttgacaaagcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttatt 321 ||||||||| |||||||||| || ||||| |||||||| ||||||||||||||||||||| Sbjct: 267 tttgacaaaacccctcatgtgcataaagacgcatttgttgctccaagtgcatcccttatt 326 Query: 322 ggtgatgttgaagttggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgat 381 || |||||| |||| || ||| |||| |||||||| || |||||||||||||| ||| Sbjct: 327 ggcgatgttcaagtcgggtcaggagcttccatttggtatgggtgcgtcttaagaggggat 386 Query: 382 gcanataacgttcgagttggatctgggaccaatatacaggacaatt--------catgtg 433 ||| | | | | | | |||||||||||||||||||||| ||||||| |||||| Sbjct: 387 gcaaacatcatacaaattggatctgggaccaatatacaagacaattctcttatacatgtg 446 Query: 434 gcaaaatctaatctaagtgggaaagtctttcca 466 || |||||||||||||||||||| ||||||||| Sbjct: 447 gctaaatctaatctaagtgggaaggtctttcca 479
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 182 bits (92), Expect = 7e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 235 tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 294 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| Sbjct: 10119385 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 10119444 Query: 295 tttgtcgctccaagtgcatcccttattggtgatgttgaagttggaaaagggtcttcaatt 354 ||||| || ||||||||||| || ||||||||| || |||||||| |||| |||||||| Sbjct: 10119445 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 10119504 Query: 355 tggtacggatgcgtcttaagaggt 378 ||||| |||||||||||||||||| Sbjct: 10119505 tggtatggatgcgtcttaagaggt 10119528 Score = 147 bits (74), Expect = 4e-32 Identities = 86/90 (95%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10117491 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 10117550 Query: 202 ctccaagggaactacttcttccacgagcag 231 ||||| |||||||||| ||||||||||||| Sbjct: 10117551 ctccaggggaactactacttccacgagcag 10117580 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%), Gaps = 9/107 (8%) Strand = Plus / Plus Query: 379 gatgcanataacgttcgagttggatctgggaccaatatacaggacaattc--------at 430 |||||| | ||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 10120536 gatgcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccat 10120595 Query: 431 gtggcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 10120596 gtggcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 10120642 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 34111212 tcccctctctcctccagatc 34111231 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cccgccgccgctgccgccct 121 |||||||||||||||||||| Sbjct: 24058638 cccgccgccgctgccgccct 24058657 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cttgcccgccgccgctgccgccct 121 ||||||||||||||| |||||||| Sbjct: 12748088 cttgcccgccgccgccgccgccct 12748065
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 182 bits (92), Expect = 7e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 235 tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 294 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| Sbjct: 66854 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 66913 Query: 295 tttgtcgctccaagtgcatcccttattggtgatgttgaagttggaaaagggtcttcaatt 354 ||||| || ||||||||||| || ||||||||| || |||||||| |||| |||||||| Sbjct: 66914 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 66973 Query: 355 tggtacggatgcgtcttaagaggt 378 ||||| |||||||||||||||||| Sbjct: 66974 tggtatggatgcgtcttaagaggt 66997 Score = 147 bits (74), Expect = 4e-32 Identities = 86/90 (95%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 64960 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 65019 Query: 202 ctccaagggaactacttcttccacgagcag 231 ||||| |||||||||| ||||||||||||| Sbjct: 65020 ctccaggggaactactacttccacgagcag 65049 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%), Gaps = 9/107 (8%) Strand = Plus / Plus Query: 379 gatgcanataacgttcgagttggatctgggaccaatatacaggacaattc--------at 430 |||||| | ||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 68005 gatgcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccat 68064 Query: 431 gtggcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 68065 gtggcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 68111
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 182 bits (92), Expect = 7e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 235 tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 294 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| Sbjct: 43984 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 44043 Query: 295 tttgtcgctccaagtgcatcccttattggtgatgttgaagttggaaaagggtcttcaatt 354 ||||| || ||||||||||| || ||||||||| || |||||||| |||| |||||||| Sbjct: 44044 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 44103 Query: 355 tggtacggatgcgtcttaagaggt 378 ||||| |||||||||||||||||| Sbjct: 44104 tggtatggatgcgtcttaagaggt 44127 Score = 147 bits (74), Expect = 4e-32 Identities = 86/90 (95%) Strand = Plus / Plus Query: 142 tacgcggtggggttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgc 201 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 42090 tacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgc 42149 Query: 202 ctccaagggaactacttcttccacgagcag 231 ||||| |||||||||| ||||||||||||| Sbjct: 42150 ctccaggggaactactacttccacgagcag 42179 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%), Gaps = 9/107 (8%) Strand = Plus / Plus Query: 379 gatgcanataacgttcgagttggatctgggaccaatatacaggacaattc--------at 430 |||||| | ||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 45135 gatgcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccat 45194 Query: 431 gtggcaaaatctaatctaagtgggaaagtctttcc-accatcattgg 476 ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 45195 gtggcaaaatctaatcttagtggaaaagtctttccaaccatcattgg 45241
>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA, complete cds Length = 1260 Score = 67.9 bits (34), Expect = 3e-08 Identities = 148/186 (79%) Strand = Plus / Plus Query: 154 ttctggatccgggagaccggtcaggccctcgaccgcctcggctgccgcctccaagggaac 213 |||||||||||||| || ||||| ||| | || || | ||||||||||||||||| ||| Sbjct: 38 ttctggatccgggaaacgggtcaagccattgatcgtttgggctgccgcctccaaggcaac 97 Query: 214 tacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaaagcc 273 |||| |||||| || || | ||||||||| | || ||||||||| | ||| ||||||| Sbjct: 98 tactacttccatgaacaactgtcaaggcatagaactcttatgaacttgtttaacaaagca 157 Query: 274 cctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgttgaa 333 || ||| | ||||| || ||||| || ||||||||||| || |||||||| ||| | Sbjct: 158 ccaatggttgataaagatgcttttgtggccccaagtgcatctctaattggtgacgttcat 217 Query: 334 gttgga 339 |||||| Sbjct: 218 gttgga 223
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 52.0 bits (26), Expect = 0.002 Identities = 73/89 (82%) Strand = Plus / Plus Query: 337 ggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgatgcanataacgttcga 396 |||| ||| ||||| |||||||| ||||| ||||| ||||| ||||| | | | || | Sbjct: 354 ggaagaggttcttccatttggtatggatgtgtcttgagaggagatgctaacagcattagt 413 Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 414 gttggagctgggaccaatattcaggacaa 442
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 73/89 (82%) Strand = Plus / Plus Query: 337 ggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgatgcanataacgttcga 396 |||| ||| ||||| |||||||| ||||| ||||| ||||| ||||| | | | || | Sbjct: 220 ggaagaggttcttccatttggtatggatgtgtcttgagaggagatgctaacagcattagt 279 Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 280 gttggagctgggaccaatattcaggacaa 308
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 52.0 bits (26), Expect = 0.002 Identities = 73/89 (82%) Strand = Plus / Plus Query: 337 ggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgatgcanataacgttcga 396 |||| ||| ||||| |||||||| ||||| ||||| ||||| ||||| | | | || | Sbjct: 328 ggaagaggttcttccatttggtatggatgtgtcttgagaggagatgctaacagcattagt 387 Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 388 gttggagctgggaccaatattcaggacaa 416
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 73/89 (82%) Strand = Plus / Plus Query: 337 ggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgatgcanataacgttcga 396 |||| ||| ||||| |||||||| ||||| ||||| ||||| ||||| | | | || | Sbjct: 50 ggaagaggttcttccatttggtatggatgtgtcttgagaggagatgctaacagcattagt 109 Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 110 gttggagctgggaccaatattcaggacaa 138
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 52.0 bits (26), Expect = 0.002 Identities = 73/89 (82%) Strand = Plus / Plus Query: 337 ggaaaagggtcttcaatttggtacggatgcgtcttaagaggtgatgcanataacgttcga 396 |||| ||| ||||| |||||||| ||||| ||||| ||||| ||||| | | | || | Sbjct: 355 ggaagaggttcttccatttggtatggatgtgtcttgagaggagatgctaacagcattagt 414 Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 415 gttggagctgggaccaatattcaggacaa 443
>dbj|AB169620.1| Macaca fascicularis brain cDNA, clone: QtrA-11611, similar to human nucleosome assembly protein 1-like 1 (NAP1L1),transcript variant 1, mRNA, RefSeq: NM_139207.1 Length = 1537 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 cccgccgccgctgccgccctgag 124 ||||||||||||||||||||||| Sbjct: 43 cccgccgccgctgccgccctgag 65
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 ccaccggcgccgcagccgccgca 89 ||||||||||||||||||||||| Sbjct: 2375277 ccaccggcgccgcagccgccgca 2375255 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 gcccgccgccgctgccgccct 121 ||||||||||||||||||||| Sbjct: 795878 gcccgccgccgctgccgccct 795858
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 ggatctgggaccaatatacaggacaa 425 |||||||| ||||||||||||||||| Sbjct: 441 ggatctggtaccaatatacaggacaa 466
>gb|AC148832.5| Pan troglodytes BAC clone CH251-48K6 from chromosome 7, complete sequence Length = 186606 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cctctctcctccagatctcaca 41 |||||||||||||||||||||| Sbjct: 12897 cctctctcctccagatctcaca 12918
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 226 gagcagatttcaaggcatcgcacacttatgaacatctttgacaaag 271 |||||| |||||||||||||||| | |||||||| ||||| |||| Sbjct: 281 gagcagctttcaaggcatcgcacgatcatgaacatatttgagaaag 326
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 226 gagcagatttcaaggcatcgcacacttatgaacatctttgacaaag 271 |||||| |||||||||||||||| | |||||||| ||||| |||| Sbjct: 283 gagcagctttcaaggcatcgcacgatcatgaacatatttgagaaag 328
>ref|XM_642369.1| Dictyostelium discoideum putative STE20 family protein kinase (DDB0216375), partial mRNA Length = 3318 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ttggtgatgttgaagttggaa 340 ||||||||||||||||||||| Sbjct: 706 ttggtgatgttgaagttggaa 686
>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence Length = 180642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 ctccagatctcacaaggcgac 48 ||||||||||||||||||||| Sbjct: 111079 ctccagatctcacaaggcgac 111099
>ref|NM_007719.1| Mus musculus chemokine (C-C motif) receptor 7 (Ccr7), mRNA Length = 2072 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 1061 tattggtgatgttgaagttgg 1041
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tgttcacaaagaggcatttgt 299 ||||||||||||||||||||| Sbjct: 49878 tgttcacaaagaggcatttgt 49858
>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland Research Institute) complete sequence Length = 143322 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tgttcacaaagaggcatttgt 299 ||||||||||||||||||||| Sbjct: 113507 tgttcacaaagaggcatttgt 113487
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cgccgccgctgccgccctgag 124 ||||||||||||||||||||| Sbjct: 3666077 cgccgccgctgccgccctgag 3666097
>gb|L31580.1|MUSEBI1CDN Mus musculus G protein-coupled receptor (EBI 1) mRNA, complete cds Length = 2072 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 1061 tattggtgatgttgaagttgg 1041
>dbj|AK154849.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109G24 product:chemokine (C-C motif) receptor 7, full insert sequence Length = 1879 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 966 tattggtgatgttgaagttgg 946
>dbj|AK154736.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630105A16 product:chemokine (C-C motif) receptor 7, full insert sequence Length = 1976 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 966 tattggtgatgttgaagttgg 946
>dbj|AK154349.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630022I01 product:chemokine (C-C motif) receptor 7, full insert sequence Length = 1934 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 966 tattggtgatgttgaagttgg 946
>dbj|AK037965.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130067M15 product:chemokine (C-C) receptor 7, full insert sequence Length = 1975 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 966 tattggtgatgttgaagttgg 946
>gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome Length = 29736 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 335 ttggaaaagggtcttcaatttggta 359 ||||| ||||||||||||||||||| Sbjct: 27846 ttggacaagggtcttcaatttggta 27822
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cccgccgccgctgccgccctg 122 ||||||||||||||||||||| Sbjct: 1107624 cccgccgccgctgccgccctg 1107604
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 cggtcaggccctcgaccgcctcggc 195 ||||||||||||||| ||||||||| Sbjct: 5246225 cggtcaggccctcgaacgcctcggc 5246249
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 gttggatctgggaccaatatacaggacaa 425 |||||| ||||||||||||| |||||||| Sbjct: 39608 gttggagctgggaccaatattcaggacaa 39580
>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete sequence Length = 207223 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcagctcccctctctcctcc 31 ||||||||||||||||||||| Sbjct: 96506 ctcagctcccctctctcctcc 96526
>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence Length = 217425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 ctccagatctcacaaggcgac 48 ||||||||||||||||||||| Sbjct: 179620 ctccagatctcacaaggcgac 179640
>emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chromosome 11, complete sequence Length = 117612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 tattggtgatgttgaagttgg 338 ||||||||||||||||||||| Sbjct: 93342 tattggtgatgttgaagttgg 93362
>ref|NM_183864.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 cttgcccgccgccgctgccgccct 121 ||||||||||||||| |||||||| Sbjct: 243 cttgcccgccgccgccgccgccct 266
>ref|NM_192725.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cccgccgccgctgccgccct 121 |||||||||||||||||||| Sbjct: 831 cccgccgccgctgccgccct 850
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 236 caaggcatcgcacacttatgaacatctttgacaaag 271 |||||||||||||| | |||||||| ||||| |||| Sbjct: 201 caaggcatcgcacaatcatgaacatatttgagaaag 236
>ref|XM_476739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 1789 ggccaccggcgccgccgccgccgc 1766
>ref|XM_506182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0050F10.9 mRNA Length = 2205 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 1850 ggccaccggcgccgccgccgccgc 1827
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 |||| ||||||||||||||||||| Sbjct: 24125 ggccgccggcgccgcagccgccgc 24148
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 145484 ccgccgccgctgccgccctg 145465
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 85827 ccgccgccgctgccgccctg 85846
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 90688 tcccctctctcctccagatc 90669
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 6943 tcccctctctcctccagatc 6962
>gb|BC044461.1| Danio rerio ubiquitin-conjugating enzyme E2N, mRNA (cDNA clone MGC:55726 IMAGE:3816061), complete cds Length = 1812 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggaaagtctttccaccatca 472 |||||||||||||||||||| Sbjct: 1176 ggaaagtctttccaccatca 1195
>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence Length = 215537 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 38381 ggccaccggagccgcagccgccgc 38358
>gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, complete sequence Length = 142124 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 5 tctcggctcagctcccctctctcctcca 32 |||| ||||||||||| ||||||||||| Sbjct: 106451 tctccgctcagctcccttctctcctcca 106424
>gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, complete sequence Length = 130269 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 5 tctcggctcagctcccctctctcctcca 32 |||| ||||||||||| ||||||||||| Sbjct: 121841 tctccgctcagctcccttctctcctcca 121868
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 5103 tcccctctctcctccagatc 5084
>ref|XM_616557.2| PREDICTED: Bos taurus similar to EF hand domain family, member A2 (LOC536426), mRNA Length = 1602 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcctcggctgccgcctcc 205 |||||||||||||||||||| Sbjct: 31 ccgcctcggctgccgcctcc 50
>ref|XM_592304.2| PREDICTED: Bos taurus similar to flightless I homolog, transcript variant 1 (LOC514446), mRNA Length = 4803 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcctcggctgccgcctcc 205 |||||||||||||||||||| Sbjct: 2830 ccgcctcggctgccgcctcc 2811
>ref|XM_879707.1| PREDICTED: Bos taurus similar to flightless I homolog, transcript variant 4 (LOC514446), mRNA Length = 2896 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcctcggctgccgcctcc 205 |||||||||||||||||||| Sbjct: 923 ccgcctcggctgccgcctcc 904
>gb|AC104710.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1286_E05, complete sequence Length = 106212 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 |||| ||||||||||||||||||| Sbjct: 103596 ggccgccggcgccgcagccgccgc 103619
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 |||||||||||| ||||||||||| Sbjct: 93507 ggccaccggcgcagcagccgccgc 93484
>ref|NM_213486.1| Danio rerio ubiquitin-conjugating enzyme E2N (ube2n), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggaaagtctttccaccatca 472 |||||||||||||||||||| Sbjct: 1176 ggaaagtctttccaccatca 1195
>ref|XM_868413.1| PREDICTED: Bos taurus similar to poly (A) polymerase alpha (LOC616400), mRNA Length = 1219 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 39 ccgccgccgctgccgccctg 20
>ref|XM_613645.2| PREDICTED: Bos taurus similar to ephrin receptor EphB3 precursor (LOC540907), mRNA Length = 3752 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 14 gcccgccgccgctgccgccc 33
>gb|BC070467.1| Mus musculus mitogen activated protein kinase kinase 7, mRNA (cDNA clone MGC:96654 IMAGE:30615302), complete cds Length = 3474 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 84 atcttccccgccgccgctgccgcc 61
>ref|NM_032632.3| Homo sapiens poly(A) polymerase alpha (PAPOLA), mRNA Length = 4539 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 168 ccgccgccgctgccgccctg 149
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 88061 ccgccgccgctgccgccctg 88042
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 24630757 tcccctctctcctccagatc 24630776
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 115814 atcttccccgccgccgctgccgcc 115791
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cgaccgcctcggctgccgcc 202 |||||||||||||||||||| Sbjct: 99758 cgaccgcctcggctgccgcc 99739
>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence Length = 175515 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 125458 ggccaccggagccgcagccgccgc 125435
>gb|AC079804.5| Homo sapiens BAC clone RP11-740N7 from 7, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctctctcctccagatctca 39 |||||||||||||||||||| Sbjct: 173573 cctctctcctccagatctca 173554
>gb|BC000927.1| Homo sapiens poly(A) polymerase alpha, mRNA (cDNA clone IMAGE:3445706), complete cds Length = 1064 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 126 ccgccgccgctgccgccctg 107
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cgccgccgctgccgccctga 123 |||||||||||||||||||| Sbjct: 1212870 cgccgccgctgccgccctga 1212851
>ref|NM_021885.4| Mus musculus tubby candidate gene (Tub), mRNA Length = 5941 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 182 ggccaccggagccgcagccgccgc 205
>emb|AL121867.13|HSA405O21 Human DNA sequence from clone RP11-405O21 on chromosome Xq21.1-21.32 Contains STSs and GSSs, complete sequence Length = 131238 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ttatgaacatctttgacaaa 270 |||||||||||||||||||| Sbjct: 42500 ttatgaacatctttgacaaa 42519
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgaccgcctcggctgccgcc 202 |||||||||||||||||||| Sbjct: 110340 cgaccgcctcggctgccgcc 110359
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 1030171 gcccgccgccgctgccgccc 1030190
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccggcgccgcagccgccgca 89 |||||||||||||||||||| Sbjct: 132002 ccggcgccgcagccgccgca 131983
>emb|BX248753.1|CNSLT1IB4 human full-length cDNA 5-PRIME end of clone CS0DF007YN24 of Fetal brain of Homo sapiens (human) Length = 1665 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 150 ccgccgccgctgccgccctg 131
>emb|BX161482.1|CNSLT1IA1 human full-length cDNA clone CS0DI086YO10 of Placenta of Homo sapiens (human) Length = 1421 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 110 ccgccgccgctgccgccctg 91
>gb|BC036014.1| Homo sapiens poly(A) polymerase alpha, mRNA (cDNA clone MGC:32916 IMAGE:5271668), complete cds Length = 4525 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 170 ccgccgccgctgccgccctg 151
>emb|AJ271405.1|SRO271405 Streptomyces rochei sttO gene, sttN gene, sttM gene, sttL gene, sttK gene, sttJ gene, sttI gene, sttH gene, sttG gene, sttF gene and sttE gene, strain F20 Length = 13339 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cgccgcagccgccgcatctg 93 |||||||||||||||||||| Sbjct: 11389 cgccgcagccgccgcatctg 11370
>emb|CR857631.1| Pongo pygmaeus mRNA; cDNA DKFZp459A2030 (from clone DKFZp459A2030) Length = 3469 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 153 ccgccgccgctgccgccctg 134
>emb|CR608973.1| full-length cDNA clone CS0DI013YO02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1073 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 148 ccgccgccgctgccgccctg 129
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 62803 tcccctctctcctccagatc 62822
>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete sequence Length = 102057 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 aagcccctcatgttcacaaa 288 |||||||||||||||||||| Sbjct: 101979 aagcccctcatgttcacaaa 101960
>gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O19 map CIC10F02, complete sequence Length = 98734 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 aagcccctcatgttcacaaa 288 |||||||||||||||||||| Sbjct: 86809 aagcccctcatgttcacaaa 86828
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 27624 gcccgccgccgctgccgccc 27643
>dbj|AK147700.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1110B01 product:tubby candidate gene, full insert sequence Length = 5996 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 237 ggccaccggagccgcagccgccgc 260
>ref|XM_683420.1| PREDICTED: Danio rerio similar to desmoglein 2 (LOC560026), mRNA Length = 4812 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 atcccttattggtgatgttg 331 |||||||||||||||||||| Sbjct: 4695 atcccttattggtgatgttg 4714
>dbj|AK165720.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630023E12 product:tubby candidate gene, full insert sequence Length = 1125 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 183 ggccaccggagccgcagccgccgc 206
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gaaaagggtcttcaatttgg 357 |||||||||||||||||||| Sbjct: 346398 gaaaagggtcttcaatttgg 346417
>dbj|AK165184.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970008K09 product:mitogen activated protein kinase kinase 7, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 89 atcttccccgccgccgctgccgcc 66
>dbj|AB178998.1| Macaca fascicularis testis cDNA clone: QtsA-11238, similar to human poly(A) polymerase alpha (PAPOLA), mRNA, RefSeq: NM_032632.2 Length = 2180 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 107 ccgccgccgctgccgccctg 88
>gb|AF107454.1|AF107454 Homo sapiens clone cD622 mRNA sequence Length = 4850 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 167 tgcccgccgccgctgccgcc 148
>dbj|AK028772.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732455E07 product:mitogen activated protein kinase kinase 7, full insert sequence Length = 2878 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 47 atcttccccgccgccgctgccgcc 24
>dbj|AK049267.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018C16 product:mitogen activated protein kinase kinase 7, full insert sequence Length = 2687 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 65 atcttccccgccgccgctgccgcc 42
>dbj|AK031137.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930412N11 product:mitogen activated protein kinase kinase 7, full insert sequence Length = 2703 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 81 atcttccccgccgccgctgccgcc 58
>dbj|AK044189.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830098F13 product:hypothetical TonB-dependent receptor protein containing protein, full insert sequence Length = 1311 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 157 ggccaccggagccgcagccgccgc 180
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cgaccgcctcggctgccgcc 202 |||||||||||||||||||| Sbjct: 24298649 cgaccgcctcggctgccgcc 24298630 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 12082245 ccgccgccgctgccgccctg 12082226 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 3085318 tcccctctctcctccagatc 3085299
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 1030171 gcccgccgccgctgccgccc 1030190
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 |||||||||||| ||||||||||| Sbjct: 21636881 ggccaccggcgcagcagccgccgc 21636858
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 236 caaggcatcgcacacttatgaacatctttgacaaag 271 |||||||||||||| | |||||||| ||||| |||| Sbjct: 26724330 caaggcatcgcacaatcatgaacatatttgagaaag 26724295 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 3704053 ggccaccggcgccgccgccgccgc 3704030
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 20832260 ccgccgccgctgccgccctg 20832241 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 |||| ||||||||||||||||||| Sbjct: 18551010 ggccgccggcgccgcagccgccgc 18551033
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 24548226 tcccctctctcctccagatc 24548245
>gb|AC073271.4| Homo sapiens BAC clone RP11-541O14 from 2, complete sequence Length = 117930 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttcatgtggcaaaatctaat 445 |||||||||||||||||||| Sbjct: 25260 ttcatgtggcaaaatctaat 25241
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cccgccgccgctgccgccct 121 |||||||||||||||||||| Sbjct: 34460 cccgccgccgctgccgccct 34479
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 107690 tcccctctctcctccagatc 107709
>gb|AE004944.1| Pseudomonas aeruginosa PAO1, section 505 of 529 of the complete genome Length = 9793 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccctgag 124 ||||||||||||||||||| |||| Sbjct: 4532 gcccgccgccgctgccgccttgag 4555
>gb|AF265342.4| Homo sapiens chromosome 8 clone CTD-2053N22 map p22-p21, complete sequence Length = 141254 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctctctcctccagatctca 39 |||||||||||||||||||| Sbjct: 110761 cctctctcctccagatctca 110780
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccggcgccgcagccgccgca 89 |||||||||||||||||||| Sbjct: 2883461 ccggcgccgcagccgccgca 2883442
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cttgcccgccgccgctgccgccct 121 ||||||||||||||| |||||||| Sbjct: 28487 cttgcccgccgccgccgccgccct 28464
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cttgcccgccgccgctgccgccct 121 ||||||||||||||| |||||||| Sbjct: 115117 cttgcccgccgccgccgccgccct 115094
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 236 caaggcatcgcacacttatgaacatctttgacaaag 271 |||||||||||||| | |||||||| ||||| |||| Sbjct: 71187 caaggcatcgcacaatcatgaacatatttgagaaag 71152
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 48404 ggccaccggcgccgccgccgccgc 48381
>dbj|AK119762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G08, full insert sequence Length = 1638 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgaccgcctcggctgccgcc 202 |||||||||||||||||||| Sbjct: 1076 cgaccgcctcggctgccgcc 1095
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 236 caaggcatcgcacacttatgaacatctttgacaaag 271 |||||||||||||| | |||||||| ||||| |||| Sbjct: 141934 caaggcatcgcacaatcatgaacatatttgagaaag 141899
>dbj|AK105668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H12, full insert sequence Length = 2008 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 1789 ggccaccggcgccgccgccgccgc 1766
>dbj|AK070189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H08, full insert sequence Length = 1338 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 |||||||||||| ||||||||||| Sbjct: 278 ggccaccggcgcagcagccgccgc 301
>gb|AF162619.1|AF162619 Drosophila virilis strain w159 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162618.1|AF162618 Drosophila virilis strain w157 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162617.1|AF162617 Drosophila virilis strain 15010-1051.51 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162616.1|AF162616 Drosophila virilis strain 15010-1051.49 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162615.1|AF162615 Drosophila virilis strain 15010-1051.48 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162614.1|AF162614 Drosophila virilis strain 15010-1051.8 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162613.1|AF162613 Drosophila virilis strain 15010-1051.0 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162612.1|AF162612 Drosophila virilis strain b42 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162611.1|AF162611 Drosophila virilis strain b31 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162610.1|AF162610 Drosophila virilis strain b22 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162609.1|AF162609 Drosophila virilis strain b15 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162608.1|AF162608 Drosophila virilis strain a33 runt protein (run) gene, partial cds Length = 494 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 474 tgcccgccgccgctgccgcc 493
>gb|AF162607.1|AF162607 Drosophila virilis strain a13 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162605.1|AF162605 Drosophila virilis strain a11 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162604.1|AF162604 Drosophila virilis strain skt runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162603.1|AF162603 Drosophila virilis strain sbb runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162602.1|AF162602 Drosophila virilis strain S9 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162601.1|AF162601 Drosophila virilis strain S2 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162600.1|AF162600 Drosophila virilis strain 15010-1051.47 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AF162599.1|AF162599 Drosophila virilis strain 15010-1051.9 runt protein (run) gene, partial cds Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 473 tgcccgccgccgctgccgcc 492
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttgcccgccgccgctgccgc 118 |||||||||||||||||||| Sbjct: 1650526 ttgcccgccgccgctgccgc 1650545
>dbj|AK068262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149M23, full insert sequence Length = 2205 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||||||||| |||||||| Sbjct: 1850 ggccaccggcgccgccgccgccgc 1827
>emb|CR753897.9| Zebrafish DNA sequence from clone CH211-219A15 in linkage group 18, complete sequence Length = 124389 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggaaagtctttccaccatca 472 |||||||||||||||||||| Sbjct: 73539 ggaaagtctttccaccatca 73558
>emb|BX572633.7| Zebrafish DNA sequence from clone CH211-276P10 in linkage group 18, complete sequence Length = 184987 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggaaagtctttccaccatca 472 |||||||||||||||||||| Sbjct: 127692 ggaaagtctttccaccatca 127673
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 236 caaggcatcgcacacttatgaacatctttgacaaag 271 |||||||||||||| | |||||||| ||||| |||| Sbjct: 201 caaggcatcgcacaatcatgaacatatttgagaaag 236
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccaccggcgccgcagccgc 85 |||||||||||||||||||| Sbjct: 2108682 gccaccggcgccgcagccgc 2108663
>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188020 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 77852 ccgccgccgctgccgccctg 77833
>gb|AF060947.1|AF060947 Mus musculus MAP kinase kinase 7 gamma 2 mRNA, complete cds Length = 1646 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 83 atcttccccgccgccgctgccgcc 60
>gb|AF060946.1|AF060946 Mus musculus MAP kinase kinase 7 gamma 1 mRNA, complete cds Length = 1682 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 83 atcttccccgccgccgctgccgcc 60
>gb|AF060945.1|AF060945 Mus musculus MAP kinase kinase 7 beta 2 mRNA, complete cds Length = 1598 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 83 atcttccccgccgccgctgccgcc 60
>gb|AF060944.1|AF060944 Mus musculus MAP kinase kinase 7 beta 1 mRNA, complete cds Length = 1643 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 83 atcttccccgccgccgctgccgcc 60
>gb|AY880351.1| Gekko japonicus GekBS120P mRNA, complete cds Length = 1006 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 38 ccgccgccgctgccgccctg 19
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 1782789 gcccgccgccgctgccgccc 1782770
>gb|U74463.1|MMU74463 Mus musculus MAP kinase kinase MKK7a (MKK7) mRNA, complete cds Length = 1299 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 29 atcttccccgccgccgctgccgcc 6
>gb|U52433.1|MMU52433 Mus musculus tubby candidate (tub) mRNA, complete cds Length = 2434 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 170 ggccaccggagccgcagccgccgc 193
>gb|AY610151.1| Sus scrofa clone Clu_8092.scr.msk.p1.Contig4, mRNA sequence Length = 1072 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 131 ccgccgccgctgccgccctg 112
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gcccgccgccgctgccgccc 120 |||||||||||||||||||| Sbjct: 1030168 gcccgccgccgctgccgccc 1030187
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cgaccgcctcggctgccgcc 202 |||||||||||||||||||| Sbjct: 24610318 cgaccgcctcggctgccgcc 24610299 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 12161552 ccgccgccgctgccgccctg 12161533 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctctcctccagatc 36 |||||||||||||||||||| Sbjct: 3094349 tcccctctctcctccagatc 3094330
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gaaaagggtcttcaatttgg 357 |||||||||||||||||||| Sbjct: 2003776 gaaaagggtcttcaatttgg 2003757
>gb|BC015150.2| Homo sapiens cDNA clone IMAGE:3532111, containing frame-shift errors Length = 4459 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccgccgctgccgccctg 122 |||||||||||||||||||| Sbjct: 90 ccgccgccgctgccgccctg 71
>gb|BC096554.1| Mus musculus tubby candidate gene, mRNA (cDNA clone MGC:106519 IMAGE:30616697), complete cds Length = 5822 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 163 ggccaccggagccgcagccgccgc 186
>gb|U54643.1|MMU54643 Mus musculus tubby (tub) mRNA, complete cds Length = 1805 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 100 ggccaccggagccgcagccgccgc 123
>gb|U22358.1|DVU22358 Drosophila virilis runt gene, complete cds Length = 2748 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tgcccgccgccgctgccgcc 119 |||||||||||||||||||| Sbjct: 2021 tgcccgccgccgctgccgcc 2040
>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12 Length = 163455 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccaccggcgccgcagccgccgc 88 ||||||||| |||||||||||||| Sbjct: 47468 ggccaccggagccgcagccgccgc 47445
>dbj|AB005654.1| Mus musculus mRNA for Mitogen-activated protein kinase kinase 7, complete cds Length = 1604 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atcttgcccgccgccgctgccgcc 119 ||||| |||||||||||||||||| Sbjct: 47 atcttccccgccgccgctgccgcc 24 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,895,291 Number of Sequences: 3902068 Number of extensions: 3895291 Number of successful extensions: 117610 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115189 Number of HSP's gapped (non-prelim): 2416 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
