ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 2e-18
2gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 101 2e-18
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
5dbj|AK100470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
6emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K... 46 0.10
7gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) ge... 46 0.10
8gb|AY048670.1| Streptomyces globisporus enediyne antitumor antib... 46 0.10
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
10dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
11dbj|AK108296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
12gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 42 1.6
13ref|XM_473164.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
14gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
15ref|XM_981545.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.6
16ref|XM_001004501.1| PREDICTED: Mus musculus hypothetical protein... 42 1.6
17emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AK121876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
21dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
22gb|AC122529.5| Mus musculus BAC clone RP24-511F2 from 3, complet... 42 1.6
23emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
24gb|AC171729.1| Lycopersicon esculentum chromosome 01 clone C01HB... 42 1.6
25gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
26gb|AE010445.1| Methanopyrus kandleri AV19 section 144 of 157 of ... 40 6.3
27gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.3
28ref|XM_483748.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
29ref|XM_475819.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
30ref|XM_465905.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
31ref|XM_450739.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
32ref|XM_450041.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
33ref|XM_506634.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
34ref|XM_476783.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
35ref|XM_476782.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
36ref|XM_507353.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
37ref|XM_506190.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
38ref|XM_473276.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
39gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
40gb|DQ396392.1| HIV-1 isolate 03ZAPS151MB1 from South Africa, com... 40 6.3
41ref|NM_001032388.1| Sus scrofa transcription factor 1, hepatic (... 40 6.3
42emb|AJ885176.1| Sus scrofa partial TCF1 gene for hepatic nuclear... 40 6.3
43gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, com... 40 6.3
44emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 40 6.3
45gb|DQ061105.1| Sus scrofa hepatic nuclear factor 1 mRNA, complet... 40 6.3
46emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
47gb|AC106789.2| Homo sapiens chromosome 5 clone RP11-371M22, comp... 40 6.3
48dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 6.3
49gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, co... 40 6.3
50gb|DP000031.1| Dasypus novemcinctus target 116 genomic scaffold 40 6.3
51gb|DQ083526.1| Sus scrofa hepatic nuclear factor 1 mRNA, complet... 40 6.3
52gb|AY224424.1| Oryza sativa (japonica cultivar-group) isolate 20... 40 6.3
53gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K... 40 6.3
54gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, co... 40 6.3
55dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
57dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
58dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
59dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
60gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, comple... 40 6.3
61dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
62gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
63dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
64dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
65dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
66dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
67dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
68dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
69dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
70emb|BX647086.1|HSM807230 Homo sapiens mRNA; cDNA DKFZp686J09111 ... 40 6.3
71dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
72dbj|AK120509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
73dbj|AK099343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
74dbj|AK098899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
75dbj|AK098856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
76dbj|AK072297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
77dbj|AK071703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
78dbj|AK071306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
79dbj|AK065275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
80dbj|AK061624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
81dbj|AK060378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
82dbj|AK060067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
83emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.3
84ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 6.3
85gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
86emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
87gb|U49329.1|HHU49329 Human herpesvirus 2 UL26 protease gene, com... 40 6.3
88gb|L37443.1|HS2ICP35P Herpes simplex virus type 2 protease and c... 40 6.3
89dbj|AP003778.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.3
90dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 6.3
91dbj|AP002780.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 2e-18
 Identities = 144/173 (83%), Gaps = 4/173 (2%)
 Strand = Plus / Plus

                                                                            
Query: 296      ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 355
                ||||||||||| | | |||||||||||||||||| |||||||||||||||| |  | |||
Sbjct: 12664509 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 12664568

                                                                            
Query: 356      ccctcctccgacatcggcctccctcagtccaacaacccaaatctcttcagcgatctcctc 415
                || ||||||| | ||||| |||| ||| ||||||||||    ||||||||||| ||||||
Sbjct: 12664569 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 12664628

                                                                     
Query: 416      gggcccgcgctcgg---atccacccgagcccag-ccaacgcgccgctcagatc 464
                ||  ||||||||||    ||| |||| | |||| |||||||||||||||||||
Sbjct: 12664629 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 12664681



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 80       tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 139
                |||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 12664281 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 12664340

                                              
Query: 140      gcctcccgctcctccacctcccgccccctc 169
                 | |||||||||||  | ||||||||||||
Sbjct: 12664341 tcgtcccgctcctctgcgtcccgccccctc 12664370



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 54       ccatgaactcctactccggcgaccggtcctcctc 87
                ||||||||||||||||||||||||| ||||||||
Sbjct: 12664243 ccatgaactcctactccggcgaccgctcctcctc 12664276
to top
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score =  101 bits (51), Expect = 2e-18
 Identities = 144/173 (83%), Gaps = 4/173 (2%)
 Strand = Plus / Minus

                                                                         
Query: 296   ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 355
             ||||||||||| | | |||||||||||||||||| |||||||||||||||| |  | |||
Sbjct: 12480 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 12421

                                                                         
Query: 356   ccctcctccgacatcggcctccctcagtccaacaacccaaatctcttcagcgatctcctc 415
             || ||||||| | ||||| |||| ||| ||||||||||    ||||||||||| ||||||
Sbjct: 12420 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 12361

                                                                  
Query: 416   gggcccgcgctcgg---atccacccgagcccag-ccaacgcgccgctcagatc 464
             ||  ||||||||||    ||| |||| | |||| |||||||||||||||||||
Sbjct: 12360 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 12308



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                         
Query: 80    tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 139
             |||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 12708 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 12649

                                           
Query: 140   gcctcccgctcctccacctcccgccccctc 169
              | |||||||||||  | ||||||||||||
Sbjct: 12648 tcgtcccgctcctctgcgtcccgccccctc 12619



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 54    ccatgaactcctactccggcgaccggtcctcctc 87
             ||||||||||||||||||||||||| ||||||||
Sbjct: 12746 ccatgaactcctactccggcgaccgctcctcctc 12713
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 2e-18
 Identities = 144/173 (83%), Gaps = 4/173 (2%)
 Strand = Plus / Plus

                                                                            
Query: 296      ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 355
                ||||||||||| | | |||||||||||||||||| |||||||||||||||| |  | |||
Sbjct: 12661272 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 12661331

                                                                            
Query: 356      ccctcctccgacatcggcctccctcagtccaacaacccaaatctcttcagcgatctcctc 415
                || ||||||| | ||||| |||| ||| ||||||||||    ||||||||||| ||||||
Sbjct: 12661332 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 12661391

                                                                     
Query: 416      gggcccgcgctcgg---atccacccgagcccag-ccaacgcgccgctcagatc 464
                ||  ||||||||||    ||| |||| | |||| |||||||||||||||||||
Sbjct: 12661392 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 12661444



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 80       tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 139
                |||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 12661044 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 12661103

                                              
Query: 140      gcctcccgctcctccacctcccgccccctc 169
                 | |||||||||||  | ||||||||||||
Sbjct: 12661104 tcgtcccgctcctctgcgtcccgccccctc 12661133



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 54       ccatgaactcctactccggcgaccggtcctcctc 87
                ||||||||||||||||||||||||| ||||||||
Sbjct: 12661006 ccatgaactcctactccggcgaccgctcctcctc 12661039
to top
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score =  101 bits (51), Expect = 2e-18
 Identities = 144/173 (83%), Gaps = 4/173 (2%)
 Strand = Plus / Plus

                                                                         
Query: 296   ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 355
             ||||||||||| | | |||||||||||||||||| |||||||||||||||| |  | |||
Sbjct: 18962 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 19021

                                                                         
Query: 356   ccctcctccgacatcggcctccctcagtccaacaacccaaatctcttcagcgatctcctc 415
             || ||||||| | ||||| |||| ||| ||||||||||    ||||||||||| ||||||
Sbjct: 19022 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 19081

                                                                  
Query: 416   gggcccgcgctcgg---atccacccgagcccag-ccaacgcgccgctcagatc 464
             ||  ||||||||||    ||| |||| | |||| |||||||||||||||||||
Sbjct: 19082 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 19134



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 80    tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 139
             |||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 18734 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 18793

                                           
Query: 140   gcctcccgctcctccacctcccgccccctc 169
              | |||||||||||  | ||||||||||||
Sbjct: 18794 tcgtcccgctcctctgcgtcccgccccctc 18823



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 54    ccatgaactcctactccggcgaccggtcctcctc 87
             ||||||||||||||||||||||||| ||||||||
Sbjct: 18696 ccatgaactcctactccggcgaccgctcctcctc 18729
to top
>dbj|AK100470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093E24, full
           insert sequence
          Length = 1833

 Score =  101 bits (51), Expect = 2e-18
 Identities = 144/173 (83%), Gaps = 4/173 (2%)
 Strand = Plus / Plus

                                                                       
Query: 296 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 355
           ||||||||||| | | |||||||||||||||||| |||||||||||||||| |  | |||
Sbjct: 412 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 471

                                                                       
Query: 356 ccctcctccgacatcggcctccctcagtccaacaacccaaatctcttcagcgatctcctc 415
           || ||||||| | ||||| |||| ||| ||||||||||    ||||||||||| ||||||
Sbjct: 472 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 531

                                                                
Query: 416 gggcccgcgctcgg---atccacccgagcccag-ccaacgcgccgctcagatc 464
           ||  ||||||||||    ||| |||| | |||| |||||||||||||||||||
Sbjct: 532 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 584



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                       
Query: 80  tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 139
           |||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 184 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 243

                                         
Query: 140 gcctcccgctcctccacctcccgccccctc 169
            | |||||||||||  | ||||||||||||
Sbjct: 244 tcgtcccgctcctctgcgtcccgccccctc 273



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 54  ccatgaactcctactccggcgaccggtcctcctc 87
           ||||||||||||||||||||||||| ||||||||
Sbjct: 146 ccatgaactcctactccggcgaccgctcctcctc 179
to top
>emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K9 on chromosome 1q23.2-24.3
             Contains the 5' end of a novel gene, a novel gene, the
             ATP1B1 gene for Na+/K+ transporting ATPase beta 1
             polypeptide, the 3' end of the NME7 gene for protein
             expressed in non-metastatic cells 7
             (nucleoside-diphosphate kinase) and a CpG island, complete
             sequence
          Length = 153624

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 139   cgcctcccgctcctccacctcccgccccctc 169
             |||||||||||||| ||||| ||||||||||
Sbjct: 65581 cgcctcccgctcctgcacctgccgccccctc 65551
to top
>gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) gene, exons 1 and 2
          Length = 7675

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 139 cgcctcccgctcctccacctcccgccccctc 169
           |||||||||||||| ||||| ||||||||||
Sbjct: 653 cgcctcccgctcctgcacctgccgccccctc 623
to top
>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027
             biosynthetic gene cluster, complete sequence
          Length = 85163

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 334   ccggagctggtccgctactgcgc 356
             |||||||||||||||||||||||
Sbjct: 65533 ccggagctggtccgctactgcgc 65511
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 274      cccctccgccgccgcggcgctc 295
                ||||||||||||||||||||||
Sbjct: 31491671 cccctccgccgccgcggcgctc 31491650



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      cccccctccgccgccgcggc 291
                ||||||||||||||||||||
Sbjct: 18242328 cccccctccgccgccgcggc 18242309
to top
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0078N11
          Length = 155168

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 274    cccctccgccgccgcggcgctc 295
              ||||||||||||||||||||||
Sbjct: 127068 cccctccgccgccgcggcgctc 127047
to top
>dbj|AK108296.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E06, full
           insert sequence
          Length = 787

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 274 cccctccgccgccgcggcgctc 295
           ||||||||||||||||||||||
Sbjct: 178 cccctccgccgccgcggcgctc 199
to top
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   cccccctccgccgccgcggcg 292
             |||||||||||||||||||||
Sbjct: 14997 cccccctccgccgccgcggcg 15017
to top
>ref|XM_473164.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3084

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 273 ccccctccgccgccgcggcgctcggatcc 301
           ||||| |||||| ||||||||||||||||
Sbjct: 86  cccccgccgccgtcgcggcgctcggatcc 114
to top
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 148   ctcctccacctcccgccccctccgc 172
             ||||||||||||||||| |||||||
Sbjct: 40511 ctcctccacctcccgcctcctccgc 40487
to top
>ref|XM_981545.1| PREDICTED: Mus musculus hypothetical protein LOC670486 (LOC670486),
           mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 139 cgcctcccgctcctccacctcccgc 163
           |||||||||||||||||| ||||||
Sbjct: 928 cgcctcccgctcctccacttcccgc 952
to top
>ref|XM_001004501.1| PREDICTED: Mus musculus hypothetical protein LOC668898 (LOC668898),
            mRNA
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  cgcctcccgctcctccacctcccgc 163
            |||||||||||||||||| ||||||
Sbjct: 1012 cgcctcccgctcctccacttcccgc 1036
to top
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
             complete sequence
          Length = 130718

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 273   ccccctccgccgccgcggcgctcggatcc 301
             ||||| |||||| ||||||||||||||||
Sbjct: 60492 cccccgccgccgtcgcggcgctcggatcc 60464
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 273      ccccctccgccgccgcggcgctcggatcc 301
                ||||| |||||| ||||||||||||||||
Sbjct: 25680765 cccccgccgccgtcgcggcgctcggatcc 25680737



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 277      ctccgccgccgcggcgctcg 296
                ||||||||||||||||||||
Sbjct: 26527645 ctccgccgccgcggcgctcg 26527664
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 148      ctcctccacctcccgccccctccgc 172
                ||||||||||||||||| |||||||
Sbjct: 19445104 ctcctccacctcccgcctcctccgc 19445080



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 273      ccccctccgccgccgcggcg 292
                ||||||||||||||||||||
Sbjct: 12507919 ccccctccgccgccgcggcg 12507900



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     cctccgccgccgcggcgctc 295
               ||||||||||||||||||||
Sbjct: 1185137 cctccgccgccgcggcgctc 1185156
to top
>dbj|AK121876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104I01, full
           insert sequence
          Length = 4125

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 273 ccccctccgccgccgcggcgctcggatcc 301
           ||||| |||||| ||||||||||||||||
Sbjct: 116 cccccgccgccgtcgcggcgctcggatcc 144
to top
>dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A08, full
           insert sequence
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 148 ctcctccacctcccgccccctccgc 172
           ||||||||||||||||| |||||||
Sbjct: 96  ctcctccacctcccgcctcctccgc 120
to top
>gb|AC122529.5| Mus musculus BAC clone RP24-511F2 from 3, complete sequence
          Length = 159294

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   cgcctcccgctcctccacctcccgc 163
             |||||||||||||||||| ||||||
Sbjct: 39792 cgcctcccgctcctccacttcccgc 39816
to top
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01,
            complete sequence
          Length = 127712

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 273  ccccctccgccgccgcggcgctcggatcc 301
            ||||| |||||| ||||||||||||||||
Sbjct: 3692 cccccgccgccgtcgcggcgctcggatcc 3664
to top
>gb|AC171729.1| Lycopersicon esculentum chromosome 01 clone C01HBa0252G05, complete
              sequence
          Length = 163336

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 375    tccctcagtccaacaacccaa 395
              |||||||||||||||||||||
Sbjct: 104553 tccctcagtccaacaacccaa 104533
to top
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ccccctccgccgccgcggcg 292
             ||||||||||||||||||||
Sbjct: 90928 ccccctccgccgccgcggcg 90947
to top
>gb|AE010445.1| Methanopyrus kandleri AV19 section 144 of 157 of the complete genome
          Length = 11002

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  tctcttcagcgatctcctcg 416
            ||||||||||||||||||||
Sbjct: 8800 tctcttcagcgatctcctcg 8781
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     cgcctcccgctcctccacct 158
               ||||||||||||||||||||
Sbjct: 3559459 cgcctcccgctcctccacct 3559440
to top
>ref|XM_483748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 273 ccccctccgccgccgcggcgctcg 296
           ||||||| ||||||||||||||||
Sbjct: 398 ccccctctgccgccgcggcgctcg 375
to top
>ref|XM_475819.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 220 ccccctccgccgccgcggcg 201
to top
>ref|XM_465905.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 777

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 cccccctccgccgccgcggc 291
           ||||||||||||||||||||
Sbjct: 118 cccccctccgccgccgcggc 137
to top
>ref|XM_450739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 50  ccccctccgccgccgcggcg 69
to top
>ref|XM_450041.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 cctccgccgccgcggcgctc 295
           ||||||||||||||||||||
Sbjct: 42  cctccgccgccgcggcgctc 23
to top
>ref|XM_506634.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.17
           mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 cctccgccgccgcggcgctc 295
           ||||||||||||||||||||
Sbjct: 88  cctccgccgccgcggcgctc 69
to top
>ref|XM_476783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1913

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 380 ccccctccgccgccgcggcg 361
to top
>ref|XM_476782.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 418 ccccctccgccgccgcggcg 399
to top
>ref|XM_507353.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2
           mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 418 ccccctccgccgccgcggcg 399
to top
>ref|XM_506190.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2
           mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 418 ccccctccgccgccgcggcg 399
to top
>ref|XM_473276.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 ctccgccgccgcggcgctcg 296
           ||||||||||||||||||||
Sbjct: 979 ctccgccgccgcggcgctcg 998
to top
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0005H02, complete sequence
          Length = 144882

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ctcccgctcctccacctccc 161
             ||||||||||||||||||||
Sbjct: 36374 ctcccgctcctccacctccc 36393
to top
>gb|DQ396392.1| HIV-1 isolate 03ZAPS151MB1 from South Africa, complete genome
          Length = 9063

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    gaggagacagccccctctcc 27
            ||||||||||||||||||||
Sbjct: 1597 gaggagacagccccctctcc 1616
to top
>ref|NM_001032388.1| Sus scrofa transcription factor 1, hepatic (TCF1), mRNA
          Length = 3181

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 ccaacgcctcccgctcctcc 154
           ||||||||||||||||||||
Sbjct: 844 ccaacgcctcccgctcctcc 825
to top
>emb|AJ885176.1| Sus scrofa partial TCF1 gene for hepatic nuclear factor 1, exons
           3-4
          Length = 589

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 ccaacgcctcccgctcctcc 154
           ||||||||||||||||||||
Sbjct: 63  ccaacgcctcccgctcctcc 44
to top
>gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, complete sequence
          Length = 149301

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   tcctccgacatcggcctccc 378
             ||||||||||||||||||||
Sbjct: 66622 tcctccgacatcggcctccc 66603
to top
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ccacccccctccgccgccgc 288
             ||||||||||||||||||||
Sbjct: 52765 ccacccccctccgccgccgc 52784
to top
>gb|DQ061105.1| Sus scrofa hepatic nuclear factor 1 mRNA, complete cds
          Length = 2313

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 ccaacgcctcccgctcctcc 154
           ||||||||||||||||||||
Sbjct: 917 ccaacgcctcccgctcctcc 898
to top
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
             complete sequence
          Length = 140454

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ctccgccgccgcggcgctcg 296
             ||||||||||||||||||||
Sbjct: 64531 ctccgccgccgcggcgctcg 64550
to top
>gb|AC106789.2| Homo sapiens chromosome 5 clone RP11-371M22, complete sequence
          Length = 115165

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   cccctccgccgccgcggcgc 293
             ||||||||||||||||||||
Sbjct: 58064 cccctccgccgccgcggcgc 58045
to top
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    ccaacgcctcccgctcctcc 154
              ||||||||||||||||||||
Sbjct: 480897 ccaacgcctcccgctcctcc 480916
to top
>gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, complete sequence
          Length = 162662

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    accacaaacacatggtcaca 237
              ||||||||||||||||||||
Sbjct: 110884 accacaaacacatggtcaca 110865
to top
>gb|DP000031.1| Dasypus novemcinctus target 116 genomic scaffold
          Length = 288075

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    aaacacatggtcacaccagc 242
              ||||||||||||||||||||
Sbjct: 222292 aaacacatggtcacaccagc 222273
to top
>gb|DQ083526.1| Sus scrofa hepatic nuclear factor 1 mRNA, complete cds
          Length = 3181

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 ccaacgcctcccgctcctcc 154
           ||||||||||||||||||||
Sbjct: 844 ccaacgcctcccgctcctcc 825
to top
>gb|AY224424.1| Oryza sativa (japonica cultivar-group) isolate 20132 protein
           tyrosine phosphatase-like protein mRNA, complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 273 ccccctccgccgccgcggcgctcg 296
           ||||||| ||||||||||||||||
Sbjct: 286 ccccctctgccgccgcggcgctcg 263
to top
>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence
          Length = 134928

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    accacaaacacatggtcaca 237
              ||||||||||||||||||||
Sbjct: 110897 accacaaacacatggtcaca 110916
to top
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds
          Length = 1479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 273 ccccctccgccgccgcggcgctcg 296
           |||| |||||||||||||||||||
Sbjct: 100 ccccttccgccgccgcggcgctcg 123
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      ctcccgctcctccacctccc 161
                ||||||||||||||||||||
Sbjct: 19461725 ctcccgctcctccacctccc 19461744
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 273      ccccctccgccgccgcggcgctcg 296
                ||||||| ||||||||||||||||
Sbjct: 27885399 ccccctctgccgccgcggcgctcg 27885422
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     ccccctccgccgccgcggcg 292
               ||||||||||||||||||||
Sbjct: 3882059 ccccctccgccgccgcggcg 3882078
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     gcctcccgctcctccacctcccgc 163
               ||||||||||||||| ||||||||
Sbjct: 5541233 gcctcccgctcctcctcctcccgc 5541210
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 273      ccccctccgccgccgcggcg 292
                ||||||||||||||||||||
Sbjct: 26709931 ccccctccgccgccgcggcg 26709950
to top
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence
          Length = 196085

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     tctcgtcccaccacaacctccttc 109
              ||||| ||||||||||||||||||
Sbjct: 108491 tctcggcccaccacaacctccttc 108468
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     ccccctccgccgccgcggcg 292
               ||||||||||||||||||||
Sbjct: 4936460 ccccctccgccgccgcggcg 4936479
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 275     ccctccgccgccgcggcgct 294
               ||||||||||||||||||||
Sbjct: 4281470 ccctccgccgccgcggcgct 4281489
to top
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ccccctccgccgccgcggcg 292
              ||||||||||||||||||||
Sbjct: 121171 ccccctccgccgccgcggcg 121190
to top
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0664C05
          Length = 165354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   gcctcccgctcctccacctcccgc 163
             ||||||||||||||| ||||||||
Sbjct: 88141 gcctcccgctcctcctcctcccgc 88118
to top
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0563F09
          Length = 174905

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   cctccgccgccgcggcgctc 295
             ||||||||||||||||||||
Sbjct: 16011 cctccgccgccgcggcgctc 16030
to top
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1310_F05
          Length = 107916

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   cctccgccgccgcggcgctc 295
             ||||||||||||||||||||
Sbjct: 73731 cctccgccgccgcggcgctc 73750
to top
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ccccctccgccgccgcggcg 292
             ||||||||||||||||||||
Sbjct: 23246 ccccctccgccgccgcggcg 23227
to top
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0052M16
          Length = 145423

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   cccccctccgccgccgcggc 291
             ||||||||||||||||||||
Sbjct: 43541 cccccctccgccgccgcggc 43522
to top
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0047E05
          Length = 184323

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    cccccctccgccgccgcggc 291
              ||||||||||||||||||||
Sbjct: 165729 cccccctccgccgccgcggc 165710
to top
>emb|BX647086.1|HSM807230 Homo sapiens mRNA; cDNA DKFZp686J09111 (from clone DKFZp686J09111)
          Length = 7111

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  accacaaacacatggtcaca 237
            ||||||||||||||||||||
Sbjct: 6202 accacaaacacatggtcaca 6221
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   ccccctccgccgccgcggcgctcg 296
             ||||||| ||||||||||||||||
Sbjct: 93477 ccccctctgccgccgcggcgctcg 93500
to top
>dbj|AK120509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123H17, full
            insert sequence
          Length = 1698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  ctccgccgccgcggcgctcg 296
            ||||||||||||||||||||
Sbjct: 1087 ctccgccgccgcggcgctcg 1106
to top
>dbj|AK099343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028L08, full
           insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 cctccgccgccgcggcgctc 295
           ||||||||||||||||||||
Sbjct: 42  cctccgccgccgcggcgctc 23
to top
>dbj|AK098899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B06, full
           insert sequence
          Length = 2083

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 419 ccccctccgccgccgcggcg 400
to top
>dbj|AK098856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J22, full
           insert sequence
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 418 ccccctccgccgccgcggcg 399
to top
>dbj|AK072297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018D17, full
            insert sequence
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  ctccgccgccgcggcgctcg 296
            ||||||||||||||||||||
Sbjct: 1134 ctccgccgccgcggcgctcg 1153
to top
>dbj|AK071703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112L03, full
           insert sequence
          Length = 1561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 366 ccccctccgccgccgcggcg 347
to top
>dbj|AK071306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C20, full
           insert sequence
          Length = 1860

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 539 ccccctccgccgccgcggcg 520
to top
>dbj|AK065275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L11, full
           insert sequence
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 418 ccccctccgccgccgcggcg 399
to top
>dbj|AK061624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C04, full
           insert sequence
          Length = 1939

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccccctccgccgccgcggcg 292
           ||||||||||||||||||||
Sbjct: 380 ccccctccgccgccgcggcg 361
to top
>dbj|AK060378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D07, full
           insert sequence
          Length = 1719

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 cctccgccgccgcggcgctc 295
           ||||||||||||||||||||
Sbjct: 88  cctccgccgccgcggcgctc 69
to top
>dbj|AK060067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H07, full
           insert sequence
          Length = 1139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 273 ccccctccgccgccgcggcgctcg 296
           ||||||| ||||||||||||||||
Sbjct: 398 ccccctctgccgccgcggcgctcg 375
to top
>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete
             sequence
          Length = 40167

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ctccgccgccgcggcgctcg 296
             ||||||||||||||||||||
Sbjct: 26455 ctccgccgccgcggcgctcg 26474
to top
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tcctggacccatcagccacc 273
              ||||||||||||||||||||
Sbjct: 709851 tcctggacccatcagccacc 709832
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      ctcccgctcctccacctccc 161
                ||||||||||||||||||||
Sbjct: 19621271 ctcccgctcctccacctccc 19621290
to top
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
              complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ctccgccgccgcggcgctcg 296
              ||||||||||||||||||||
Sbjct: 168285 ctccgccgccgcggcgctcg 168304
to top
>gb|U49329.1|HHU49329 Human herpesvirus 2 UL26 protease gene, complete cds
          Length = 2472

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  ccacccccctccgccgccgc 288
            ||||||||||||||||||||
Sbjct: 2273 ccacccccctccgccgccgc 2292
to top
>gb|L37443.1|HS2ICP35P Herpes simplex virus type 2 protease and capsid protein (ICP35) gene,
            5' end
          Length = 1908

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  ccacccccctccgccgccgc 288
            ||||||||||||||||||||
Sbjct: 1734 ccacccccctccgccgccgc 1753
to top
>dbj|AP003778.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-384C21, complete
             sequences
          Length = 183146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ctcctccacctcccgccccc 167
             ||||||||||||||||||||
Sbjct: 38373 ctcctccacctcccgccccc 38354
to top
>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete
              sequence, 4 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tcctggacccatcagccacc 273
              ||||||||||||||||||||
Sbjct: 109851 tcctggacccatcagccacc 109832
to top
>dbj|AP002780.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-648G9, complete
             sequence
          Length = 73990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ctcctccacctcccgccccc 167
             ||||||||||||||||||||
Sbjct: 58396 ctcctccacctcccgccccc 58377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,434,701
Number of Sequences: 3902068
Number of extensions: 3434701
Number of successful extensions: 80907
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79105
Number of HSP's gapped (non-prelim): 1797
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top