>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +2

Query: 245 LQTWKQQAIFSDPKNLTGDW---VGPGVCSYTGVFCAPAPSSGELAVAGVDLNHGDIAGY 415
           L  +KQ ++ SDP N+ G+W    G G CS+ GV C     S +  + G+DL +  + G 
Sbjct: 38  LLAFKQNSVKSDPNNVLGNWKYESGRGSCSWRGVSC-----SDDGRIVGLDLRNSGLTGT 92

Query: 416 L 418
           L
Sbjct: 93  L 93

>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 245 LQTWKQQAIFSDPKNLTGDW---VGPGVCSYTGVFCAPAPSSGELAVAGVDLNHGDIAGY 415
           L  +KQ +I SDP N  G+W    G   C++ GV C     S +  V G+DL +G + G 
Sbjct: 37  LTAFKQTSIKSDPTNFLGNWRYGSGRDPCTWRGVSC-----SSDGRVIGLDLRNGGLTGT 91

Query: 416 L 418
           L
Sbjct: 92  L 92

>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -1

Query: 256 PRLQRDVRVPQPRAREPPGR 197
           PR Q + R  QPRA+EPPGR
Sbjct: 69  PRPQDEPRAQQPRAQEPPGR 88

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -2

Query: 453 SARSQRRPSSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV*LQTPGPTQSPVR 289
           S R  R P  + R  + SP  R+ P T+S P    GA  +P   Q+P P+  P+R
Sbjct: 683 STREARSPQPNKR-HSPSPRPRA-PQTSSPPPVRRGASSSPQRRQSPSPSTRPIR 735

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 453 SARSQRRPSSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV*LQTPGPTQSPVR 289
           S R  R P  + R  + SP  R+   ++S P    GA  +P   Q+P P+  P+R
Sbjct: 669 STREARSPQPNKR-HSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -2

Query: 453 SARSQRRPSSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV*LQTPGPTQSPVR 289
           S R  R P  + R  + SP  R+ P T+S P    GA  +P   Q+P P+  P+R
Sbjct: 688 STREARSPQPNKR-HSPSPRPRA-PQTSSPPPVRRGASASPQGRQSPSPSTRPIR 740

>K1543_MOUSE (Q80VC9) Protein KIAA1543|
          Length = 1252

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 432 PSSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV*LQTPGPTQSP 295
           P + G  P  + W+   PAT       + A++ P   ++PGP  SP
Sbjct: 729 PEAPGPAPPPAAWVIPGPATGPKAASPSPARRAPAARRSPGPGPSP 774

>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
 Frame = +2

Query: 194 DPAWRFPSPRLRDAYVALQTWKQQAIFSDPKNLTGDWVGPGV---------CSYTGVFCA 346
           +P + FPS        A  +W     F+ P    GD + PG          CS + V  +
Sbjct: 271 NPGYEFPSGGQEMGSAAATSWMPYQAFTPPAAYGGDAMYPGAAGPFPFQQSCSKSSVVVS 330

Query: 347 PAPSSGELAVAGVDLN 394
             P S   A A  D++
Sbjct: 331 SQPFSPPTAAAAGDMH 346

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -2

Query: 453 SARSQRRPSSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV*LQTPGPTQSPVR 289
           S R  R P  + R  + SP  R++  ++S P    GA  +P   Q+P P+  P+R
Sbjct: 662 SNRETRSPPQNKR-DSPSPRPRASHTSSSPPPLRRGASASPQRRQSPSPSTRPIR 715

>YII3_YEAST (P40506) Hypothetical protein YIL083c|
          Length = 365

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 245 LQTWKQQAIFSDPKNLTGDWV 307
           LQT  +Q IF  P+N  GDWV
Sbjct: 310 LQTRNKQVIFVSPENRKGDWV 330

>TBX3_HUMAN (O15119) T-box transcription factor TBX3 (T-box protein 3)|
          Length = 743

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 435 RPSSDGR*PAMSPWLRSTPATASSPDDGAGAQK 337
           RP   GR    SP  R +PAT SS   G GA++
Sbjct: 421 RPRDSGRLDKASPDSRHSPATISSSTRGLGAEE 453

>DGK2_DROME (Q09103) Eye-specific diacylglycerol kinase (EC 2.7.1.107) (Retinal|
           degeneration A protein) (Diglyceride kinase 2) (DGK 2)
           (DAG kinase 2)
          Length = 1457

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 429 SSDGR*PAMSPWLRSTPATASSPDDGAGAQKTPV 328
           S+ GR PA++P + STP +++  DD   A   PV
Sbjct: 374 SNSGRLPALAPII-STPCSSADADDAGAAMGLPV 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,515,500
Number of Sequences: 219361
Number of extensions: 870437
Number of successful extensions: 3008
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2990
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)