ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast55c06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 216 bits (109), Expect = 5e-53 Identities = 232/268 (86%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 203 tggcggttccctagcccgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagcag 262 |||||||| || ||| || || |||||||||||||||| |||||||||||||||| || | Sbjct: 220 tggcggtttccgagctcgaggatgcgggacgcgtacgtggcgctgcagacgtggaggcgg 279 Query: 263 caggccatcttctccgaccccaagaacctcaccggcgactgggtgggccccggggtctgc 322 |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| Sbjct: 280 gaggccatcttctccgaccccggcaacctcaccgccgactgggtgggccccgacgtgtgc 339 Query: 323 agctacaccggcgtcttctgcgcgcccgct-ccgtcg--tcgg-gcgagctcgccgtcgc 378 | |||||||||||| ||||||||| ||||| |||| | ||| | ||| |||||||||| Sbjct: 340 aactacaccggcgtgttctgcgcg-ccgctgccgtgggatcgccgggaggtcgccgtcgc 398 Query: 379 cggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcct 438 ||| |||||||||||||||||||||||||| || ||||| || ||||||||||||| || Sbjct: 399 cggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctgct 458 Query: 439 ctgcgacctcgcgctgctccacctcaac 466 | ||||||||||||||||||||||||| Sbjct: 459 cgccgacctcgcgctgctccacctcaac 486
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 216 bits (109), Expect = 5e-53 Identities = 232/268 (86%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 203 tggcggttccctagcccgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagcag 262 |||||||| || ||| || || |||||||||||||||| |||||||||||||||| || | Sbjct: 4180194 tggcggtttccgagctcgaggatgcgggacgcgtacgtggcgctgcagacgtggaggcgg 4180135 Query: 263 caggccatcttctccgaccccaagaacctcaccggcgactgggtgggccccggggtctgc 322 |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| Sbjct: 4180134 gaggccatcttctccgaccccggcaacctcaccgccgactgggtgggccccgacgtgtgc 4180075 Query: 323 agctacaccggcgtcttctgcgcgcccgct-ccgtcg--tcgg-gcgagctcgccgtcgc 378 | |||||||||||| ||||||||| ||||| |||| | ||| | ||| |||||||||| Sbjct: 4180074 aactacaccggcgtgttctgcgcg-ccgctgccgtgggatcgccgggaggtcgccgtcgc 4180016 Query: 379 cggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcct 438 ||| |||||||||||||||||||||||||| || ||||| || ||||||||||||| || Sbjct: 4180015 cggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctgct 4179956 Query: 439 ctgcgacctcgcgctgctccacctcaac 466 | ||||||||||||||||||||||||| Sbjct: 4179955 cgccgacctcgcgctgctccacctcaac 4179928 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 23281774 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 23281833 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 23281834 gacctcgccgtgctccac 23281851 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 23281610 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 23281651 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 429 tcggcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||||| | ||||||||| |||||||||||||| Sbjct: 14422074 tcggcctcctgtccgacctcgccgtgctccacctcaac 14422037
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 216 bits (109), Expect = 5e-53 Identities = 232/268 (86%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 203 tggcggttccctagcccgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagcag 262 |||||||| || ||| || || |||||||||||||||| |||||||||||||||| || | Sbjct: 18161 tggcggtttccgagctcgaggatgcgggacgcgtacgtggcgctgcagacgtggaggcgg 18102 Query: 263 caggccatcttctccgaccccaagaacctcaccggcgactgggtgggccccggggtctgc 322 |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| Sbjct: 18101 gaggccatcttctccgaccccggcaacctcaccgccgactgggtgggccccgacgtgtgc 18042 Query: 323 agctacaccggcgtcttctgcgcgcccgct-ccgtcg--tcgg-gcgagctcgccgtcgc 378 | |||||||||||| ||||||||| ||||| |||| | ||| | ||| |||||||||| Sbjct: 18041 aactacaccggcgtgttctgcgcg-ccgctgccgtgggatcgccgggaggtcgccgtcgc 17983 Query: 379 cggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcct 438 ||| |||||||||||||||||||||||||| || ||||| || ||||||||||||| || Sbjct: 17982 cggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctgct 17923 Query: 439 ctgcgacctcgcgctgctccacctcaac 466 | ||||||||||||||||||||||||| Sbjct: 17922 cgccgacctcgcgctgctccacctcaac 17895
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 216 bits (109), Expect = 5e-53 Identities = 232/268 (86%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 203 tggcggttccctagcccgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagcag 262 |||||||| || ||| || || |||||||||||||||| |||||||||||||||| || | Sbjct: 127165 tggcggtttccgagctcgaggatgcgggacgcgtacgtggcgctgcagacgtggaggcgg 127106 Query: 263 caggccatcttctccgaccccaagaacctcaccggcgactgggtgggccccggggtctgc 322 |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| Sbjct: 127105 gaggccatcttctccgaccccggcaacctcaccgccgactgggtgggccccgacgtgtgc 127046 Query: 323 agctacaccggcgtcttctgcgcgcccgct-ccgtcg--tcgg-gcgagctcgccgtcgc 378 | |||||||||||| ||||||||| ||||| |||| | ||| | ||| |||||||||| Sbjct: 127045 aactacaccggcgtgttctgcgcg-ccgctgccgtgggatcgccgggaggtcgccgtcgc 126987 Query: 379 cggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcct 438 ||| |||||||||||||||||||||||||| || ||||| || ||||||||||||| || Sbjct: 126986 cggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctgct 126927 Query: 439 ctgcgacctcgcgctgctccacctcaac 466 | ||||||||||||||||||||||||| Sbjct: 126926 cgccgacctcgcgctgctccacctcaac 126899
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 216 bits (109), Expect = 5e-53 Identities = 232/268 (86%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 203 tggcggttccctagcccgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagcag 262 |||||||| || ||| || || |||||||||||||||| |||||||||||||||| || | Sbjct: 220 tggcggtttccgagctcgaggatgcgggacgcgtacgtggcgctgcagacgtggaggcgg 279 Query: 263 caggccatcttctccgaccccaagaacctcaccggcgactgggtgggccccggggtctgc 322 |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| Sbjct: 280 gaggccatcttctccgaccccggcaacctcaccgccgactgggtgggccccgacgtgtgc 339 Query: 323 agctacaccggcgtcttctgcgcgcccgct-ccgtcg--tcgg-gcgagctcgccgtcgc 378 | |||||||||||| ||||||||| ||||| |||| | ||| | ||| |||||||||| Sbjct: 340 aactacaccggcgtgttctgcgcg-ccgctgccgtgggatcgccgggaggtcgccgtcgc 398 Query: 379 cggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcct 438 ||| |||||||||||||||||||||||||| || ||||| || ||||||||||||| || Sbjct: 399 cggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctgct 458 Query: 439 ctgcgacctcgcgctgctccacctcaac 466 | ||||||||||||||||||||||||| Sbjct: 459 cgccgacctcgcgctgctccacctcaac 486
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 182 bits (92), Expect = 7e-43 Identities = 152/172 (88%) Strand = Plus / Plus Query: 177 cggcggctgtggaggtggaccctgcctggcggttccctagcccgcggctgcgggacgcgt 236 ||||||| |||| ||||||||| || ||| |||| || ||| || ||||||| ||||||| Sbjct: 89 cggcggcggtggtggtggacccggcgtggaggtttccgagcgcgaggctgcgtgacgcgt 148 Query: 237 acgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacctcaccg 296 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 149 acgtggcgctgcagacgtggaagcagacggccatcttctccgaccccaagaacctcaccg 208 Query: 297 gcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||||||| ||||||| || ||| |||||||||||||||||||||||| Sbjct: 209 ccgactgggtcggccccgccgtgtgcgcctacaccggcgtcttctgcgcgcc 260 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 360 cgggcgagctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcc 419 |||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 284 cgggggaggtcgccgtcgccggggttgacctcaaccacggcgacatcgcggggtacctcc 343 Query: 420 cgtccgagctcggcctcctctgcgacctcgcgctgctccacctcaac 466 | |||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 344 ccgccgagctcgggttgctcaccgacctcgcgctgctccacctcaac 390
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 182 bits (92), Expect = 7e-43 Identities = 152/172 (88%) Strand = Plus / Minus Query: 177 cggcggctgtggaggtggaccctgcctggcggttccctagcccgcggctgcgggacgcgt 236 ||||||| |||| ||||||||| || ||| |||| || ||| || ||||||| ||||||| Sbjct: 125427 cggcggcggtggtggtggacccggcgtggaggtttccgagcgcgaggctgcgtgacgcgt 125368 Query: 237 acgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacctcaccg 296 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 125367 acgtggcgctgcagacgtggaagcagacggccatcttctccgaccccaagaacctcaccg 125308 Query: 297 gcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||||||| ||||||| || ||| |||||||||||||||||||||||| Sbjct: 125307 ccgactgggtcggccccgccgtgtgcgcctacaccggcgtcttctgcgcgcc 125256 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcc 419 |||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 125232 cgggggaggtcgccgtcgccggggttgacctcaaccacggcgacatcgcggggtacctcc 125173 Query: 420 cgtccgagctcggcctcctctgcgacctcgcgctgctccacctcaac 466 | |||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 125172 ccgccgagctcgggttgctcaccgacctcgcgctgctccacctcaac 125126
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 182 bits (92), Expect = 7e-43 Identities = 152/172 (88%) Strand = Plus / Minus Query: 177 cggcggctgtggaggtggaccctgcctggcggttccctagcccgcggctgcgggacgcgt 236 ||||||| |||| ||||||||| || ||| |||| || ||| || ||||||| ||||||| Sbjct: 4757422 cggcggcggtggtggtggacccggcgtggaggtttccgagcgcgaggctgcgtgacgcgt 4757363 Query: 237 acgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacctcaccg 296 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4757362 acgtggcgctgcagacgtggaagcagacggccatcttctccgaccccaagaacctcaccg 4757303 Query: 297 gcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||||||| ||||||| || ||| |||||||||||||||||||||||| Sbjct: 4757302 ccgactgggtcggccccgccgtgtgcgcctacaccggcgtcttctgcgcgcc 4757251 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcc 419 |||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 4757227 cgggggaggtcgccgtcgccggggttgacctcaaccacggcgacatcgcggggtacctcc 4757168 Query: 420 cgtccgagctcggcctcctctgcgacctcgcgctgctccacctcaac 466 | |||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 4757167 ccgccgagctcgggttgctcaccgacctcgcgctgctccacctcaac 4757121 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccgg 381 |||||||||||||||||||||| Sbjct: 2285209 cgggcgagctcgccgtcgccgg 2285188 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccccaagaacctcaccggcga 300 ||||||||||||||||||||| Sbjct: 20834573 ccccaagaacctcaccggcga 20834553
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 182 bits (92), Expect = 7e-43 Identities = 152/172 (88%) Strand = Plus / Minus Query: 177 cggcggctgtggaggtggaccctgcctggcggttccctagcccgcggctgcgggacgcgt 236 ||||||| |||| ||||||||| || ||| |||| || ||| || ||||||| ||||||| Sbjct: 29830 cggcggcggtggtggtggacccggcgtggaggtttccgagcgcgaggctgcgtgacgcgt 29771 Query: 237 acgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacctcaccg 296 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 29770 acgtggcgctgcagacgtggaagcagacggccatcttctccgaccccaagaacctcaccg 29711 Query: 297 gcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||||||| ||||||| || ||| |||||||||||||||||||||||| Sbjct: 29710 ccgactgggtcggccccgccgtgtgcgcctacaccggcgtcttctgcgcgcc 29659 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcc 419 |||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 29635 cgggggaggtcgccgtcgccggggttgacctcaaccacggcgacatcgcggggtacctcc 29576 Query: 420 cgtccgagctcggcctcctctgcgacctcgcgctgctccacctcaac 466 | |||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 29575 ccgccgagctcgggttgctcaccgacctcgcgctgctccacctcaac 29529
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 225 tgcgggacgcgtacgtcgcgctgcagacgtggaagcagcaggccatcttctccgacccca 284 |||||||||||||||| | |||||||||||||| || | ||||||||||||||||||||| Sbjct: 14988259 tgcgggacgcgtacgtggtgctgcagacgtggaggcgggaggccatcttctccgacccca 14988318 Query: 285 agaacctcaccggcgactgggtgggccccg 314 | ||||||||| ||| ||||||||||||| Sbjct: 14988319 acaacctcaccaccgattgggtgggccccg 14988348
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 225 tgcgggacgcgtacgtcgcgctgcagacgtggaagcagcaggccatcttctccgacccca 284 |||||||||||||||| | |||||||||||||| || | ||||||||||||||||||||| Sbjct: 57705 tgcgggacgcgtacgtggtgctgcagacgtggaggcgggaggccatcttctccgacccca 57764 Query: 285 agaacctcaccggcgactgggtgggccccg 314 | ||||||||| ||| ||||||||||||| Sbjct: 57765 acaacctcaccaccgattgggtgggccccg 57794
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 391 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 450 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 451 gcctcctcgccgacgtcgcgctcctccacctcaac 485
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 24289910 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 24289851 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 24289850 gcctcctcgccgacgtcgcgctcctccacctcaac 24289816 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 ||||| || |||||||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 32781228 gccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctc 32781169 Query: 437 ctctgcgacctcgcgctgctccacctcaac 466 ||| ||||||||| | ||||||||||| Sbjct: 32781168 ctcaccgacctcgccgtcttccacctcaac 32781139 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cggcagcggcgggggcggtg 149 |||||||||||||||||||| Sbjct: 34048883 cggcagcggcgggggcggtg 34048864
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 90714 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 90773 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 90774 gcctcctcgccgacgtcgcgctcctccacctcaac 90808
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 24207379 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 24207320 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 24207319 gcctcctcgccgacgtcgcgctcctccacctcaac 24207285 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 ||||| || |||||||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 32871738 gccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctc 32871679 Query: 437 ctctgcgacctcgcgctgctccacctcaac 466 ||| ||||||||| | ||||||||||| Sbjct: 32871678 ctcaccgacctcgccgtcttccacctcaac 32871649 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cggcagcggcgggggcggtg 149 |||||||||||||||||||| Sbjct: 34139355 cggcagcggcgggggcggtg 34139336
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full insert sequence Length = 1511 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 425 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 484 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 485 gcctcctcgccgacgtcgcgctcctccacctcaac 519
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full insert sequence Length = 1642 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 425 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 484 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 485 gcctcctcgccgacgtcgcgctcctccacctcaac 519
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full insert sequence Length = 1451 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 421 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 480 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 481 gcctcctcgccgacgtcgcgctcctccacctcaac 515
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full insert sequence Length = 1122 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||||||||| || | |||||| | | |||| Sbjct: 58 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcg 117 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| |||| ||||||| |||||||||||| Sbjct: 118 gcctcctcgccgacgtcgcgctcctccacctcaac 152
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 373 cgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcgg 432 ||||||||| |||||||||||| |||||||||||| || |||||||| |||||||||| Sbjct: 21747237 cgtcgccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcgg 21747178 Query: 433 cctcctctgcgacctcgcgctgctccacctcaac 466 |||| | ||||||||||||| ||||| ||||| Sbjct: 21747177 cctcatgaccgacctcgcgctgttccacgtcaac 21747144 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 262 gcaggccatcttctccgaccccaagaacctcaccggcgactgggt 306 |||||| |||| |||||||||||||||| ||||||||| |||||| Sbjct: 21747351 gcaggcgatctactccgaccccaagaacttcaccggcggctgggt 21747307
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 373 cgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcgg 432 ||||||||| |||||||||||| |||||||||||| || |||||||| |||||||||| Sbjct: 21675582 cgtcgccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcgg 21675523 Query: 433 cctcctctgcgacctcgcgctgctccacctcaac 466 |||| | ||||||||||||| ||||| ||||| Sbjct: 21675522 cctcatgaccgacctcgcgctgttccacgtcaac 21675489 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 262 gcaggccatcttctccgaccccaagaacctcaccggcgactgggt 306 |||||| |||| |||||||||||||||| ||||||||| |||||| Sbjct: 21675696 gcaggcgatctactccgaccccaagaacttcaccggcggctgggt 21675652
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 373 cgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcgg 432 ||||||||| |||||||||||| |||||||||||| || |||||||| |||||||||| Sbjct: 65314 cgtcgccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcgg 65373 Query: 433 cctcctctgcgacctcgcgctgctccacctcaac 466 |||| | ||||||||||||| ||||| ||||| Sbjct: 65374 cctcatgaccgacctcgcgctgttccacgtcaac 65407 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 262 gcaggccatcttctccgaccccaagaacctcaccggcgactgggt 306 |||||| |||| |||||||||||||||| ||||||||| |||||| Sbjct: 65200 gcaggcgatctactccgaccccaagaacttcaccggcggctgggt 65244
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||| |||| | |||||| |||||||| Sbjct: 330 ccgtcgccggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcg 389 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| ||||||||| |||||||||||||| Sbjct: 390 gcctcctcaccgacctcgccgtgctccacctcaac 424 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 277 cgaccccaagaacctcaccggcg 299 ||||||||||||||||||||||| Sbjct: 232 cgaccccaagaacctcaccggcg 254
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||| |||| | |||||| |||||||| Sbjct: 4062676 ccgtcgccggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcg 4062617 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| ||||||||| |||||||||||||| Sbjct: 4062616 gcctcctcaccgacctcgccgtgctccacctcaac 4062582 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 cgaccccaagaacctcaccggcg 299 ||||||||||||||||||||||| Sbjct: 4062774 cgaccccaagaacctcaccggcg 4062752
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||| |||| | |||||| |||||||| Sbjct: 55534 ccgtcgccggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcg 55475 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| ||||||||| |||||||||||||| Sbjct: 55474 gcctcctcaccgacctcgccgtgctccacctcaac 55440 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 cgaccccaagaacctcaccggcg 299 ||||||||||||||||||||||| Sbjct: 55632 cgaccccaagaacctcaccggcg 55610
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 372 ccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcg 431 |||||||||| |||||||||||||||||||| |||| | |||||| |||||||| Sbjct: 330 ccgtcgccggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcg 389 Query: 432 gcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||| ||||||||| |||||||||||||| Sbjct: 390 gcctcctcaccgacctcgccgtgctccacctcaac 424 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 277 cgaccccaagaacctcaccggcg 299 ||||||||||||||||||||||| Sbjct: 232 cgaccccaagaacctcaccggcg 254
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 |||||| ||||||||||| || |||||||||||| ||||| ||| ||||||||||||| Sbjct: 388 gccgggatcgacctcaacggcgccgacatcgcggggtacctgccgcccgagctcggcctg 447 Query: 437 ctctgcgacctcgc 450 ||| ||||||||| Sbjct: 448 ctcaccgacctcgc 461
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 |||||| ||||||||||| || |||||||||||| ||||| ||| ||||||||||||| Sbjct: 797 gccgggatcgacctcaacggcgccgacatcgcggggtacctgccgcccgagctcggcctg 856 Query: 437 ctctgcgacctcgc 450 ||| ||||||||| Sbjct: 857 ctcaccgacctcgc 870
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 232 cgcgtacgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacct 291 |||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||| | Sbjct: 168 cgcgtacgccgcgctccaggcgtggaagcagacggccatcttctccgacccctccaactt 227 Query: 292 caccggcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||| | |||||| ||| || |||||| ||||| |||||||| ||||||||| Sbjct: 228 caccgccagctgggtcggcgccaacgtctgcgcctacaacggcgtctactgcgcgcc 284 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 368 ctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacct 417 |||| ||||||||| | ||||||||||||| ||||||||| || ||||| Sbjct: 319 ctcgtcgtcgccggcattgacctcaaccacgccgacatcgccgggtacct 368
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 374 gtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggc 433 |||||||| ||||||||||| || ||||||||| || ||||||||| | ||||||||| Sbjct: 59770 gtcgccggcatcgacctcaacggcgccgacatcgccgggtacctcccgccggagctcggc 59711 Query: 434 ctcctctgcgacctcgc 450 |||||| ||||||||| Sbjct: 59710 ctcctcaccgacctcgc 59694
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 374 gtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggc 433 |||||||| ||||||||||| || ||||||||| || ||||||||| | ||||||||| Sbjct: 25452879 gtcgccggcatcgacctcaacggcgccgacatcgccgggtacctcccgccggagctcggc 25452820 Query: 434 ctcctctgcgacctcgc 450 |||||| ||||||||| Sbjct: 25452819 ctcctcaccgacctcgc 25452803 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 gccgcggtggtgctgctcctctgc 115 |||||| ||||||||||||||||| Sbjct: 2207815 gccgcgctggtgctgctcctctgc 2207838
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 232 cgcgtacgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacct 291 |||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||| | Sbjct: 2023138 cgcgtacgccgcgctccaggcgtggaagcagacggccatcttctccgacccctccaactt 2023079 Query: 292 caccggcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||| | |||||| ||| || |||||| ||||| |||||||| ||||||||| Sbjct: 2023078 caccgccagctgggtcggcgccaacgtctgcgcctacaacggcgtctactgcgcgcc 2023022 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 368 ctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacct 417 |||| ||||||||| | ||||||||||||| ||||||||| || ||||| Sbjct: 2022987 ctcgtcgtcgccggcattgacctcaaccacgccgacatcgccgggtacct 2022938
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 232 cgcgtacgtcgcgctgcagacgtggaagcagcaggccatcttctccgaccccaagaacct 291 |||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||| | Sbjct: 73346 cgcgtacgccgcgctccaggcgtggaagcagacggccatcttctccgacccctccaactt 73287 Query: 292 caccggcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcgcc 348 ||||| | |||||| ||| || |||||| ||||| |||||||| ||||||||| Sbjct: 73286 caccgccagctgggtcggcgccaacgtctgcgcctacaacggcgtctactgcgcgcc 73230 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 368 ctcgccgtcgccggggtcgacctcaaccacggcgacatcgcgggttacct 417 |||| ||||||||| | ||||||||||||| ||||||||| || ||||| Sbjct: 73195 ctcgtcgtcgccggcattgacctcaaccacgccgacatcgccgggtacct 73146
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 374 gtcgccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggc 433 |||||||| ||||||||||| || ||||||||| || ||||||||| | ||||||||| Sbjct: 25771549 gtcgccggcatcgacctcaacggcgccgacatcgccgggtacctcccgccggagctcggc 25771490 Query: 434 ctcctctgcgacctcgc 450 |||||| ||||||||| Sbjct: 25771489 ctcctcaccgacctcgc 25771473 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 gccgcggtggtgctgctcctctgc 115 |||||| ||||||||||||||||| Sbjct: 2215596 gccgcgctggtgctgctcctctgc 2215619
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 267 ccatcttctccgaccccaagaacctcaccggcgactgggtgggcc 311 |||||||||||||||||||||||||||| | ||||| ||| |||| Sbjct: 24244538 ccatcttctccgaccccaagaacctcactgccgactaggttggcc 24244582 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 373 cgtcgccggggtcgacctcaaccacggcgacatcgc 408 |||||||||| ||||||||||||||| ||||||||| Sbjct: 29238913 cgtcgccgggctcgacctcaaccacgccgacatcgc 29238948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 95/115 (82%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 233 gcgtacgtcgcgctgcagacgtggaagcagca-ggccatcttctccgaccccaagaacct 291 |||||||||||||| ||| |||||| || ||| |||||||||||||||||| |||| | Sbjct: 29238770 gcgtacgtcgcgctccaggcgtggaggc-gcacggccatcttctccgacccggcgaactt 29238828 Query: 292 caccggcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcg 346 ||||| | ||||| ||||||| || ||| |||||| |||||| ||||||||| Sbjct: 29238829 caccgccaactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 29238883 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 442 cgacctcgcgctgctccacctcaac 466 ||||||||||||||||||||||||| Sbjct: 29238985 cgacctcgcgctgctccacctcaac 29239009 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgacctcgcgctgctccacctcaac 466 |||| |||||||||||||||||||| Sbjct: 24244693 cgacatcgcgctgctccacctcaac 24244717
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 267 ccatcttctccgaccccaagaacctcaccggcgactgggtgggcc 311 |||||||||||||||||||||||||||| | ||||| ||| |||| Sbjct: 74627 ccatcttctccgaccccaagaacctcactgccgactaggttggcc 74671 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgacctcgcgctgctccacctcaac 466 |||| |||||||||||||||||||| Sbjct: 74782 cgacatcgcgctgctccacctcaac 74806
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 373 cgtcgccggggtcgacctcaaccacggcgacatcgc 408 |||||||||| ||||||||||||||| ||||||||| Sbjct: 1711 cgtcgccgggctcgacctcaaccacgccgacatcgc 1746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 95/115 (82%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 233 gcgtacgtcgcgctgcagacgtggaagcagca-ggccatcttctccgaccccaagaacct 291 |||||||||||||| ||| |||||| || ||| |||||||||||||||||| |||| | Sbjct: 1568 gcgtacgtcgcgctccaggcgtggaggc-gcacggccatcttctccgacccggcgaactt 1626 Query: 292 caccggcgactgggtgggccccggggtctgcagctacaccggcgtcttctgcgcg 346 ||||| | ||||| ||||||| || ||| |||||| |||||| ||||||||| Sbjct: 1627 caccgccaactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 1681 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 442 cgacctcgcgctgctccacctcaac 466 ||||||||||||||||||||||||| Sbjct: 1783 cgacctcgcgctgctccacctcaac 1807
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 367 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 426 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 427 gacctcgccgtgctccac 444 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 203 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 244
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 ||||| || |||||||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 98313 gccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctc 98372 Query: 437 ctctgcgacctcgc 450 ||| ||||||||| Sbjct: 98373 ctcaccgacctcgc 98386
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 7472 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 7531 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 7532 gacctcgccgtgctccac 7549 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 7308 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 7349
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 68516 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 68575 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 68576 gacctcgccgtgctccac 68593 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 68352 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 68393
>emb|Z34465.1|ZMEXTENS Z.mays (B73) gene for extensin-like protein Length = 4431 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 |||||| ||||||||||| || ||||||||| || |||||||| | ||||||||||| Sbjct: 851 gccgggatcgacctcaacggcgccgacatcgccgggtacctccccccggagctcggcctg 910 Query: 437 ctctgcgacctcgc 450 ||| ||||||||| Sbjct: 911 ctcaccgacctcgc 924
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 426 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 485 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 486 gacctcgccgtgctccac 503 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 262 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 303
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 383 gtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctcctctgc 442 ||||| |||||||||| |||||| ||||| ||||||| |||||||||||| ||| | Sbjct: 425 gtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgcc 484 Query: 443 gacctcgcgctgctccac 460 |||||||| |||||||| Sbjct: 485 gacctcgccgtgctccac 502 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 cgcggctgcgggacgcgtacgtcgcgctgcagacgtggaagc 260 ||||||| || ||||||||||| ||| ||||| ||||||||| Sbjct: 261 cgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagc 302
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 ||||| || |||||||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 401 gccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctc 460 Query: 437 ctctgcgacctcgc 450 ||| ||||||||| Sbjct: 461 ctcaccgacctcgc 474
>ref|NM_019402.1| Mus musculus poly(A) binding protein, nuclear 1 (Pabpn1), mRNA Length = 909 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 325 cgccgtcgccggggtcggcctcaacca 299
>gb|BC055866.1| Mus musculus poly(A) binding protein, nuclear 1, mRNA (cDNA clone MGC:68006 IMAGE:4218469), complete cds Length = 1002 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 327 cgccgtcgccggggtcggcctcaacca 301
>gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome 14, complete sequence Length = 237561 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 8623 cgccgtcgccggggtcggcctcaacca 8649
>gb|AY008306.1| Lilium longiflorum extensin-like protein mRNA, partial cds Length = 404 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 377 gccggggtcgacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggcctc 436 ||||| |||||||||||| || ||||| ||||| ||||| || |||||||||||||| Sbjct: 185 gccggtgtcgacctcaacggcgctgacattgcgggatacctacccgccgagctcggcctc 244 Query: 437 ctc 439 ||| Sbjct: 245 ctc 247
>gb|BC049869.1| Mus musculus poly(A) binding protein, nuclear 1, mRNA (cDNA clone IMAGE:5097084), with apparent retained intron Length = 951 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 323 cgccgtcgccggggtcggcctcaacca 297
>dbj|AK157143.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830204I09 product:poly(A) binding protein, nuclear 1, full insert sequence Length = 1778 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 327 cgccgtcgccggggtcggcctcaacca 301
>dbj|AK032172.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430407F06 product:poly(A) binding protein, nuclear 1, full insert sequence Length = 1763 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 334 cgccgtcgccggggtcggcctcaacca 308
>gb|U93050.1|MMU93050 Mus musculus poly(A) binding protein II (mPABII) gene, complete cds Length = 5164 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 370 cgccgtcgccggggtcgacctcaacca 396 ||||||||||||||||| ||||||||| Sbjct: 611 cgccgtcgccggggtcggcctcaacca 585
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 tcggcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||||| | ||||||||| |||||||||||||| Sbjct: 401 tcggcctcctgtccgacctcgccgtgctccacctcaac 438
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccgg 381 |||||||||||||||||||||| Sbjct: 117640 cgggcgagctcgccgtcgccgg 117619
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 425 gagctcggcctcctctgcgacctcgcgctg 454 ||||||| |||||||| ||||||||||||| Sbjct: 5048263 gagctcgccctcctcttcgacctcgcgctg 5048234
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 429 tcggcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||||| | ||||||||| |||||||||||||| Sbjct: 83471 tcggcctcctgtccgacctcgccgtgctccacctcaac 83434
>dbj|AK110652.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-E03, full insert sequence Length = 1376 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 cgggcgagctcgccgtcgccgg 381 |||||||||||||||||||||| Sbjct: 1160 cgggcgagctcgccgtcgccgg 1181
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 tcggcctcctctgcgacctcgcgctgctccacctcaac 466 |||||||||| | ||||||||| |||||||||||||| Sbjct: 494 tcggcctcctgtccgacctcgccgtgctccacctcaac 531
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 cgggcgagctcgccgtcgccgg 381 |||||||||||||||||||||| Sbjct: 13124 cgggcgagctcgccgtcgccgg 13103
>ref|XM_475257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ccccaagaacctcaccggcga 300 ||||||||||||||||||||| Sbjct: 1047 ccccaagaacctcaccggcga 1067
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccccaagaacctcaccggcga 300 ||||||||||||||||||||| Sbjct: 147797 ccccaagaacctcaccggcga 147777
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccccaagaacctcaccggcga 300 ||||||||||||||||||||| Sbjct: 90374 ccccaagaacctcaccggcga 90354
>gb|AF355125.1| Homo sapiens clone HSA16q24 beta-tubulin 4Q (TUBB4Q) pseudogene, partial sequence Length = 2833 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 635 ggcagcggcgggggcggtgcc 655
>gb|AF355124.1| Homo sapiens clone HSA4q35 beta-tubulin 4Q (TUBB4Q) pseudogene, partial sequence Length = 3028 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 628 ggcagcggcgggggcggtgcc 648
>gb|AC116033.3| Zea mays genomic clone ZM15C05 sequence, complete sequence Length = 99606 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cgccttcgccggcagcggcgg 141 ||||||||||||||||||||| Sbjct: 45710 cgccttcgccggcagcggcgg 45690
>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence Length = 233369 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cgccttcgccggcagcggcgg 141 ||||||||||||||||||||| Sbjct: 189437 cgccttcgccggcagcggcgg 189457
>ref|NG_002334.1| Homo sapiens HSA16q24 beta-tubulin 4Q pseudogene (LOC197331) on chromosome 16 Length = 2833 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 635 ggcagcggcgggggcggtgcc 655
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence Length = 210446 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 118573 ggcagcggcgggggcggtgcc 118593
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cgacctcaaccacggcgacatcgcg 409 |||||||||||||||||| |||||| Sbjct: 6162894 cgacctcaaccacggcgagatcgcg 6162918
>ref|XM_319618.2| Anopheles gambiae str. PEST ENSANGP00000013882 (ENSANGG00000011393), partial mRNA Length = 2553 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ctgctttttcgccttcgccggcagc 136 ||||||||||||||||||| ||||| Sbjct: 1071 ctgctttttcgccttcgccagcagc 1047
>dbj|AK067448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107N09, full insert sequence Length = 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ccccaagaacctcaccggcga 300 ||||||||||||||||||||| Sbjct: 566 ccccaagaacctcaccggcga 586
>gb|AF146191.1|AF146191 Homo sapiens FRG1 (FRG1) gene, complete cds; 5S ribosomal RNA gene, complete sequence; TUB4q and TIG2 pseudogenes, complete sequence Length = 133974 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 77684 ggcagcggcgggggcggtgcc 77664
>gb|AF061365.1|AF061365 Homo sapiens beta-tubulin pseudogene, complete sequence Length = 1424 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggcgggggcggtgcc 151 ||||||||||||||||||||| Sbjct: 139 ggcagcggcgggggcggtgcc 159
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gctcgccgtcgccggggtcg 386 |||||||||||||||||||| Sbjct: 30206 gctcgccgtcgccggggtcg 30187
>ref|XM_457565.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B14355g) partial mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggggcggtgccgtatgggcg 160 |||||||||||||||||||| Sbjct: 1202 ggggcggtgccgtatgggcg 1221
>emb|CR626932.1| Triticum turgidum Length = 19229 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gctcgccgtcgccggggtcg 386 |||||||||||||||||||| Sbjct: 9565 gctcgccgtcgccggggtcg 9584
>emb|CR626930.1| Triticum aestivum Length = 19274 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gctcgccgtcgccggggtcg 386 |||||||||||||||||||| Sbjct: 9563 gctcgccgtcgccggggtcg 9582
>ref|XM_569325.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB03920) partial mRNA Length = 3855 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cagacgtggaagcagcaggc 267 |||||||||||||||||||| Sbjct: 2821 cagacgtggaagcagcaggc 2802
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cgccttcgccggcagcggcg 140 |||||||||||||||||||| Sbjct: 4810688 cgccttcgccggcagcggcg 4810707
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggggcggtgccgtatgggcg 160 |||||||||||||||||||| Sbjct: 1121899 ggggcggtgccgtatgggcg 1121880
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ccggggtctgcagctacaccggcg 335 |||||||| ||||||||||||||| Sbjct: 175806 ccggggtcagcagctacaccggcg 175783
>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence Length = 197531 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgctcctctgctttttcgcc 124 |||||||||||||||||||| Sbjct: 59730 tgctcctctgctttttcgcc 59711
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cagcaggccatcttctccgacccc 283 ||||||| |||||||||||||||| Sbjct: 53712 cagcaggtcatcttctccgacccc 53735
>emb|AJ308233.1|TNI308233 Tetraodon nigroviridis aw502783-like gene (partial), af290615-like gene, ak000823-like gene, vav-3 gene, amylase-1 gene, amylase-2 gene and amylase-3 gene Length = 148106 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gtggaagcagcaggccatct 272 |||||||||||||||||||| Sbjct: 58571 gtggaagcagcaggccatct 58552
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cagacgtggaagcagcaggc 267 |||||||||||||||||||| Sbjct: 1152902 cagacgtggaagcagcaggc 1152921
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gccgtcgccggggtcgacct 390 |||||||||||||||||||| Sbjct: 67182 gccgtcgccggggtcgacct 67201
>gb|AF411607.1|AF411607 Mycobacterium avium subsp. paratuberculosis 34 kDa antigen gene, complete cds; and unknown gene Length = 3200 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tcgccttcgccggcagcggc 139 |||||||||||||||||||| Sbjct: 2754 tcgccttcgccggcagcggc 2773
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ggcagcggcgggggcggtgc 150 |||||||||||||||||||| Sbjct: 402240 ggcagcggcgggggcggtgc 402221
>gb|AC068476.13| Homo sapiens chromosome 8, clone RP11-374B17, complete sequence Length = 205196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ggaggtggaccctgcctggc 206 |||||||||||||||||||| Sbjct: 120741 ggaggtggaccctgcctggc 120722
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cggcagcggcgggggcggtg 149 |||||||||||||||||||| Sbjct: 12695 cggcagcggcgggggcggtg 12676
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cggcagcggcgggggcggtg 149 |||||||||||||||||||| Sbjct: 8808 cggcagcggcgggggcggtg 8827
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcgccggcagcggcgggggc 145 |||||||||||||||||||| Sbjct: 93772 tcgccggcagcggcgggggc 93753
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcgccggcagcggcgggggc 145 |||||||||||||||||||| Sbjct: 2916 tcgccggcagcggcgggggc 2935
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccaagaacctcaccggcgac 301 |||||||||||||||||||| Sbjct: 2875721 ccaagaacctcaccggcgac 2875702
>emb|AJ011837.1|MAV011837 Mycobacterium avium avium insertion sequence IS1613 containing hed and p44 genes Length = 1734 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ggtcgacctcaaccacggcg 401 |||||||||||||||||||| Sbjct: 1130 ggtcgacctcaaccacggcg 1111
>ref|NM_207927.1| Eremothecium gossypii AAR033Wp (AAR033W), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ggcagcggcgggggcggtgc 150 |||||||||||||||||||| Sbjct: 818 ggcagcggcgggggcggtgc 799
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tcgccttcgccggcagcggc 139 |||||||||||||||||||| Sbjct: 930695 tcgccttcgccggcagcggc 930714
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 gccgcggtggtgctgctcctctgc 115 |||||| ||||||||||||||||| Sbjct: 104509 gccgcgctggtgctgctcctctgc 104532
>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete sequence Length = 216332 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tgctcctctgctttttcgcc 124 |||||||||||||||||||| Sbjct: 205809 tgctcctctgctttttcgcc 205828
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcgccggcagcggcgggggc 145 |||||||||||||||||||| Sbjct: 5836 tcgccggcagcggcgggggc 5817
>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214, complete sequence Length = 95881 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 386 gacctcaaccacggcgacatcgcgggttacctcccgtccgagctcggc 433 |||||||||||||| ||||| || || || |||||| |||||||||| Sbjct: 26844 gacctcaaccacggtgacattgccggatatctcccggacgagctcggc 26891 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,193,509 Number of Sequences: 3902068 Number of extensions: 3193509 Number of successful extensions: 70192 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68123 Number of HSP's gapped (non-prelim): 2057 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
