| Clone Name | bast55c05 |
|---|---|
| Clone Library Name | barley_pub |
>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| Length = 319 Score = 54.7 bits (130), Expect = 1e-07 Identities = 32/90 (35%), Positives = 51/90 (56%) Frame = +3 Query: 159 VVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 VV+ A G+GD+ ++ +AV + P ++ R +++I AG Y E V VP K I G GR + Sbjct: 9 VVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTS 68 Query: 339 TVVEWHDKASDRGPDGQQLRTYNTASVTVL 428 T++ AS DG T+N+A+V + Sbjct: 69 TII----TASKNVQDGS--TTFNSATVAAV 92
>PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pectin| methylesterase 4) (PE 4) (VANGUARD1-like protein 1) (VGD1-like protein 1) (AtPME4) Length = 588 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/65 (41%), Positives = 40/65 (61%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F ++QQAVD+ P NN R I+ I AG Y E+V++P K I + G G T Sbjct: 278 VVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKT 337 Query: 342 VVEWH 356 V+ ++ Sbjct: 338 VISYN 342
>PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 583 Score = 50.4 bits (119), Expect = 2e-06 Identities = 31/87 (35%), Positives = 48/87 (55%) Frame = +3 Query: 159 VVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 VV+ A G+GD+ ++ +AV P +S R +++I AG Y E V VP K I G G+ Sbjct: 273 VVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSN 332 Query: 339 TVVEWHDKASDRGPDGQQLRTYNTASV 419 T++ AS DG T+++A+V Sbjct: 333 TII----TASRNVQDGS--TTFHSATV 353
>PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pectin| methylesterase 5) (PE 5) (VANGUARD 1 protein) Length = 595 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/65 (38%), Positives = 39/65 (60%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F ++QQAV++ P N R I+ I AG Y E+V++P K I + G G T Sbjct: 285 VVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKT 344 Query: 342 VVEWH 356 V+ ++ Sbjct: 345 VISYN 349
>PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 586 Score = 48.5 bits (114), Expect = 8e-06 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%) Frame = +3 Query: 159 VVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 V + G GD L++ +AV VP + ++ + +GTY+E VV+ SK + + G G+ Sbjct: 281 VTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGK 340 Query: 339 TVVEWHDKASDRGPDGQQLRTYNTAS------------VTVLSTISPPKHQ 455 T++ D P TY TA+ + +++T KHQ Sbjct: 341 TIISGSKNFVDGTP------TYETATFAIQGKGFIMKDIGIINTAGAAKHQ 385
>PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 587 Score = 45.8 bits (107), Expect = 5e-05 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 22/126 (17%) Frame = +3 Query: 144 VGVRRVVMDAT----------GAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVP 293 VG RR++ +T G+GDF ++ AV + P ++ R ++ I AG Y E V V Sbjct: 262 VGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVT 321 Query: 294 ASKPCITLEGAGRDATVVEWHDKASDRGPDGQQLRTYNTASV------------TVLSTI 437 K I G GR T++ S DG T+++A+V T +T Sbjct: 322 KKKTNIMFLGDGRGKTII----TGSRNVVDGS--TTFHSATVAAVGERFLARDITFQNTA 375 Query: 438 SPPKHQ 455 P KHQ Sbjct: 376 GPSKHQ 381
>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 374 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/83 (32%), Positives = 44/83 (53%) Frame = +3 Query: 177 GAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDATVVEWH 356 G+G + +I++A+D+VP N+ I+ I AG Y E + +P S + L G G T + + Sbjct: 65 GSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGN 124 Query: 357 DKASDRGPDGQQLRTYNTASVTV 425 D GP T++T +V V Sbjct: 125 KSVKD-GPS-----TFHTTTVGV 141
>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 584 Score = 43.9 bits (102), Expect = 2e-04 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%) Frame = +3 Query: 159 VVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 VV+ A G+G+F ++ +V + P + R I++I AG Y E V V I G GR Sbjct: 274 VVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTR 333 Query: 339 TVVEWHDKASDRGPDGQQLRTYNTASVTVL------------STISPPKHQ 455 T++ S DG T+ +A+V V+ +T P KHQ Sbjct: 334 TII----TGSRNVVDGS--TTFKSATVAVVGEGFLARDITFQNTAGPSKHQ 378
>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 545 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = +3 Query: 159 VVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 +V+ G+GD+ ++ +AV ++P N+ RVI+ + G Y E V K + L G G D Sbjct: 233 IVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDY 292 Query: 339 TVV 347 T++ Sbjct: 293 TII 295
>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 43.1 bits (100), Expect = 3e-04 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 10/108 (9%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ A G+G+F ++ AV + P + R I++I AG Y E V V I G GR T Sbjct: 275 VVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRT 334 Query: 342 VVEWHDKASDRGPDGQQLRTYNTASV----------TVLSTISPPKHQ 455 ++ S DG TA+V T +T P KHQ Sbjct: 335 II----TGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQ 378
>PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 544 Score = 43.1 bits (100), Expect = 3e-04 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G GD+ ++ +AV + P N R ++ + G Y E VVV K + + G G +AT Sbjct: 234 VVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNAT 293 Query: 342 VV 347 ++ Sbjct: 294 II 295
>PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC 3.1.1.11)| (Pectin methylesterase) (PE) (VANGUARD1-like protein 2) (VGD1-like protein 2) Length = 588 Score = 42.0 bits (97), Expect = 8e-04 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F +I +AV + P N R I+ I AG Y E+V +P K I + G G T Sbjct: 278 VVAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQT 337 Query: 342 VV 347 ++ Sbjct: 338 II 339
>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F +I +AV + P N R I+ I AG Y E+V +P + + G G T Sbjct: 274 VVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQT 333 Query: 342 VV 347 ++ Sbjct: 334 II 335
>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| (Fragment) Length = 571 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F +I +AV + P N R I+ I AG Y E+V +P + + G G T Sbjct: 261 VVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQT 320 Query: 342 VV 347 ++ Sbjct: 321 II 322
>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 522 Score = 40.8 bits (94), Expect = 0.002 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Frame = +3 Query: 177 GAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDATVVEWH 356 G G+F ++ AV + P + R ++ I GTY E V + K + + G G DAT++ + Sbjct: 215 GTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGN 274 Query: 357 DKASDRGPDGQQL------RTYNTASVTVLSTISPPKHQ 455 D + R + +T +T P KHQ Sbjct: 275 RSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQ 313
>PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 546 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = +3 Query: 150 VRRVVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAG 329 + V+ G GD+ ++ +AV + P + R ++ + GTY E V V ++K + + G G Sbjct: 231 IANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDG 290 Query: 330 RDATVV 347 AT + Sbjct: 291 MYATTI 296
>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) (P65) Length = 447 Score = 38.9 bits (89), Expect = 0.007 Identities = 28/88 (31%), Positives = 42/88 (47%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F ++ A+ +VP N+V ++ + AG Y E V V +T+ G G T Sbjct: 133 VVAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKT 192 Query: 342 VVEWHDKASDRGPDGQQLRTYNTASVTV 425 S DG + TYNTA+ V Sbjct: 193 KF----TGSLNYADG--INTYNTATFGV 214
>PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 396 Score = 37.7 bits (86), Expect = 0.015 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = +3 Query: 171 ATGAGDFLSIQQAVDSVPVNNSV-RVIMQINAGTYIEKVVVPASKPCITLEG--AGRDAT 341 A G+ + ++Q A+D+ + V R + + AGTY E V VP S P ITL A + T Sbjct: 84 ADGSAQYKTVQAAIDAAVADGGVARKYISVKAGTYNELVCVPESAPPITLYSLDANANNT 143 Query: 342 VVEWHD 359 V+ +++ Sbjct: 144 VIVYNN 149
>PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 37.4 bits (85), Expect = 0.019 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G G + ++ +AV + P + R ++ + GTY E V V + K + + G G AT Sbjct: 239 VVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYAT 298 Query: 342 VVEWHDKASDRGPDGQQL------RTYNTASVTVLSTISPPKHQ 455 ++ D + + + + +T P KHQ Sbjct: 299 IITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQ 342
>PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 37.0 bits (84), Expect = 0.025 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G G + ++ +AV + P + R ++ + G Y E V V + K + + G G AT Sbjct: 239 VVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHAT 298 Query: 342 VVEWHDKASDRGPDGQQL------RTYNTASVTVLSTISPPKHQ 455 ++ + D + + + + +T P KHQ Sbjct: 299 IITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQ 342
>PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 396 Score = 35.4 bits (80), Expect = 0.073 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +3 Query: 171 ATGAGDFLSIQQAVDS-VPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 A G + ++Q A+D+ V R + + AG Y E V VP S P ITL G +A Sbjct: 84 ADGTAQYKTVQAAIDAAVNAGGVARRYISVKAGIYNELVCVPESAPPITLYGLDANA 140
>DIG1_CAEEL (Q09165) Mesocentin precursor| Length = 13100 Score = 34.3 bits (77), Expect = 0.16 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Frame = +3 Query: 141 PVGVRRVVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLE 320 P+G + V+ G+G+++ V + +++ N G + + P P T + Sbjct: 10904 PLGPDKRVLPTDGSGNYIY-------PAVGSDEKILPTDNLGKVVYPITRPDGSPLAT-D 10955 Query: 321 GAG----RDATVVEWHDKASDRGPDGQQLRTYNTAS 416 G D T+VE +++ GPDGQ L T N+ + Sbjct: 10956 STGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGN 10991 Score = 32.3 bits (72), Expect = 0.62 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = +3 Query: 168 DATGA---GDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDA 338 D+TG GD +++ + P+ +V+ N+G YI V+ P +P T + +G+ Sbjct: 10955 DSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPDGEPLGT-DASGKTV 11013 Query: 339 TVVEWHDKASDRGPDGQQLRT 401 V RGPDG L T Sbjct: 11014 YPV--------RGPDGTPLAT 11026 Score = 31.6 bits (70), Expect = 1.1 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +3 Query: 195 SIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAG----RDATVVEWHDK 362 S + +VDS P +++ RVI VV+P P T + G R +VE D+ Sbjct: 2445 SSKNSVDSQPTDDAGRVIYP---------VVLPDGSPLAT-DSTGNFVNRHGDIVERDDE 2494 Query: 363 ASDRGPDGQQLRT 401 GPDGQ L T Sbjct: 2495 GKPMGPDGQLLPT 2507 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Frame = +3 Query: 138 QPVGVRRVVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITL 317 +P+G + +G+++ +Q+ V + + + +G + + P P T Sbjct: 5701 KPLGPDGQTLPTDASGNYVYLQK------VEETTKPLPTDESGNIVYPITKPDGTPLAT- 5753 Query: 318 EGAG----RDATVVEWHDKASDRGPDGQQLRT 401 + G D TV+E D+ GPDGQ L T Sbjct: 5754 DSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPT 5785
>PMEB_DICD3 (Q47474) Pectinesterase B precursor (EC 3.1.1.11) (Pectin| methylesterase B) (PE B) Length = 433 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +3 Query: 144 VGVRRVVMDATGAGDFLSIQQAVDSVPVNN--SVRVIMQINAGTYIEKVVVPASKPCITL 317 VG R V AT SIQQAV++ + RV +++ GTY V VP P +TL Sbjct: 89 VGPRAGVAGATHT----SIQQAVNAALRQHPGQTRVYIKLLPGTYTGTVYVPEGAPPLTL 144 Query: 318 EGAG 329 GAG Sbjct: 145 FGAG 148
>PME_ASPTU (P17872) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 331 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 ++ A GD+ +I AVD++ ++ + I G+Y E+V +PA + + G D T Sbjct: 28 IVVAKSGGDYDTISAAVDALSTTSTETQTIFIEEGSYDEQVYIPALSGKLIVYGQTEDTT 87
>PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 510 Score = 32.3 bits (72), Expect = 0.62 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +3 Query: 120 GHHQYRQPVGVRRVVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPAS 299 G + Q +V+ G+G+ +IQ+AV + R ++ I AGTY E + V Sbjct: 190 GDRKLLQTTPRANIVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEVKLK 249 Query: 300 KPCITLEGAGR 332 +G G+ Sbjct: 250 NIMFVGDGIGK 260
>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 581 Score = 32.0 bits (71), Expect = 0.81 Identities = 22/88 (25%), Positives = 39/88 (44%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDAT 341 V+ G+G F +I +A+ V + R + + G Y+E + + + + + G G+D T Sbjct: 275 VVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKT 334 Query: 342 VVEWHDKASDRGPDGQQLRTYNTASVTV 425 V D P T+ TA+ V Sbjct: 335 FVVGSRNFMDGTP------TFETATFAV 356
>PME_ASPAC (Q12535) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 331 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +3 Query: 162 VMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKVVVPASKPCITLEG 323 ++ A GD+ +I A+D++ + + + I GTY E+V +PA + + G Sbjct: 28 IVVAKSGGDYTTIGDAIDALSTSTTDTQTIFIEEGTYDEQVYLPAMTGKVIIYG 81
>GLMU_LACLA (Q9CEF8) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 458 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +3 Query: 141 PVGVRRVVMDATGAGDFLSIQQAVDSVPVNNSVRVIMQINAGTYI 275 P G R++ D G S+++ V+ N+ + I +IN GTYI Sbjct: 135 PTGYGRIIRDENG-----SVEKIVEQKDANDFEKSITEINTGTYI 174
>NEGR1_RAT (Q9Z0J8) Neuronal growth regulator 1 precursor (Kilon protein)| (Kindred of IgLON) Length = 348 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +3 Query: 225 VNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDATVVEWH--DKASDRGPDGQQLR 398 V N I +I +GT V P I EGAG EW+ +K G G ++ Sbjct: 214 VVNFAPTIQEIKSGT-----VTPGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQQGIIIQ 268 Query: 399 TYNTASVTVLSTIS 440 ++T S+ ++ ++ Sbjct: 269 NFSTRSILTVTNVT 282
>NEGR1_MOUSE (Q80Z24) Neuronal growth regulator 1 precursor (Kilon protein)| (Kindred of IgLON) (Neurotractin) Length = 348 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%) Frame = +3 Query: 180 AGDFLSIQQAVDSVPVNNSVRVIMQINAGTYIEKV----VVPASKPCITLEGAGRDATVV 347 AG++ + S P VRVI +N I+++ V P I EGAG Sbjct: 192 AGEYECSAENDVSFPDVKKVRVI--VNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAF 249 Query: 348 EWH--DKASDRGPDGQQLRTYNTASVTVLSTIS 440 EW+ +K G G ++ ++T S+ ++ ++ Sbjct: 250 EWYKGEKRLFNGQQGIIIQNFSTRSILTVTNVT 282
>NEGR1_HUMAN (Q7Z3B1) Neuronal growth regulator 1 precursor| Length = 354 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +3 Query: 225 VNNSVRVIMQINAGTYIEKVVVPASKPCITLEGAGRDATVVEWH--DKASDRGPDGQQLR 398 V N I +I +GT V P I EGAG EW+ +K G G ++ Sbjct: 220 VVNFAPTIQEIKSGT-----VTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQ 274 Query: 399 TYNTASVTVLSTIS 440 ++T S+ ++ ++ Sbjct: 275 NFSTRSILTVTNVT 288
>TRPV2_MOUSE (Q9WTR1) Transient receptor potential cation channel subfamily V| member 2 (TrpV2) (osm-9-like TRP channel 2) (OTRPC2) (Growth factor-regulated calcium channel) (GRC) Length = 756 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = -3 Query: 283 TFSM*VPALICMMTRTLLFTGTESTACWMERKSPAPVASITTLRTPTGCLYWWCPR 116 T+ + + LI +M+ T+ T+S + W +K+ I+ L G YWWC R Sbjct: 628 TYVLLLNMLIALMSETVNSVATDSWSIWKLQKA------ISVLEMENG--YWWCRR 675
>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)| (Preprospasmolysin) Length = 400 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 421 VTEAVL*VRSCCPSGPRSLALSCHSTTVASRPAPSSVMHGFDAGTTT 281 +TE +R CC S C++ TV + PAP + A TTT Sbjct: 89 ITEKQCILRGCCFDSSISGVKWCYARTVITTPAPDTTTASTTAETTT 135
>ASTL_HUMAN (Q6HA08) Astacin-like metalloendopeptidase precursor (EC 3.4.-.-)| (Oocyte astacin) (Ovastacin) Length = 431 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 409 VL*VRSCCPSGPRSLALSCHSTTVASRPAPSSV 311 VL + C PSGPR H+ + PAP+S+ Sbjct: 275 VLKLYGCSPSGPRPRGRGSHAHSTGKSPAPASL 307
>NEGR1_CHICK (Q9W6V2) Neuronal growth regulator 1 precursor (Neurotractin)| Length = 352 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = +3 Query: 207 AVDSVPVNNSVRVIMQINAGTYIEKV----VVPASKPCITLEGAGRDATVVEWH--DKAS 368 A + V V + +V + +N I+++ V+ I EGAG A V EW+ ++ Sbjct: 203 AENDVSVPDVKKVKVTVNFAPTIQELKSSGVMLGGNGLIRCEGAGVPAPVFEWYRGERKL 262 Query: 369 DRGPDGQQLRTYNTASVTVLSTIS 440 G G ++ Y+T S+ ++ ++ Sbjct: 263 ISGQQGITIKNYSTRSLLTVTNVT 286
>COR1A_MOUSE (O89053) Coronin-1A (Coronin-like protein p57) (Coronin-like| protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) Length = 461 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 282 VVVPASKPCITLEGAGRDATVVEWHDKASD 371 +V+P +P ITLEG + +V WH A + Sbjct: 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQN 145
>RELN_MOUSE (Q60841) Reelin precursor (EC 3.4.21.-) (Reeler protein)| Length = 3461 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = -3 Query: 400 VRSCCPSGPRSLALSCHSTTVASRPAPSSVMHGFDAGTTTFSM*VPALICMMTRTLLFTG 221 V C P GPR L +C +TT A S + +G+ FS P++ + Sbjct: 241 VTFCEPYGPRELTTTCLNTTTA-----SVLQFSIGSGSCRFSYSDPSITVSYAK------ 289 Query: 220 TESTACWMERKSPAPVASITTL 155 +TA W++ + ++++T+ Sbjct: 290 -NNTADWIQLEKIRAPSNVSTV 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,945,664 Number of Sequences: 219361 Number of extensions: 528633 Number of successful extensions: 1961 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1961 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)