ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY831394.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 3 (BIERF3) mRNA, complete cds Length = 1199 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 179 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 238 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 239 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 298 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 299 tccggctggctccccgacggctcattcgccgccgtcaagccggag 343 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 97 gctggacagcatccggcaccacctcctggagga 129
>ref|XM_467107.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 178 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 237 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 238 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 297 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 298 tccggctggctccccgacggctcattcgccgccgtcaagccggag 342 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 96 gctggacagcatccggcaccacctcctggagga 128
>ref|XM_506890.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.13 mRNA Length = 1302 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 179 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 238 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 239 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 298 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 299 tccggctggctccccgacggctcattcgccgccgtcaagccggag 343 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 97 gctggacagcatccggcaccacctcctggagga 129
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Minus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 26441801 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 26441742 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 26441741 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 26441682 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 26441681 tccggctggctccccgacggctcattcgccgccgtcaagccggag 26441637 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 26441883 gctggacagcatccggcaccacctcctggagga 26441851
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Minus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 41717 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 41658 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 41657 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 41598 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 41597 tccggctggctccccgacggctcattcgccgccgtcaagccggag 41553 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 41799 gctggacagcatccggcaccacctcctggagga 41767
>dbj|AK105940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B11, full insert sequence Length = 1209 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 178 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 237 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 238 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 297 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 298 tccggctggctccccgacggctcattcgccgccgtcaagccggag 342 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 96 gctggacagcatccggcaccacctcctggagga 128
>dbj|AK073812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068P11, full insert sequence Length = 1302 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 179 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 238 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 239 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 298 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 299 tccggctggctccccgacggctcattcgccgccgtcaagccggag 343 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 97 gctggacagcatccggcaccacctcctggagga 129
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 208 bits (105), Expect = 1e-50 Identities = 150/165 (90%) Strand = Plus / Minus Query: 214 tactgccggagcgccagcttcggaagcctggtggcggaccagtggagcgagtcgctcccg 273 |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct: 160548 tactgccggagctcaagcttcggcagcctcgtggccgaccagtggagcgagtcgctgccg 160489 Query: 274 ttccgcgccgacgactcggacgacatggtcgtctacggcgccctccgcgacgccttctcc 333 ||||| || ||||| | || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 160488 ttccggcccaacgacgccgaggacatggtcgtgtacggcgccctccgcgacgccttctcc 160429 Query: 334 tgcggctggctccccgacggctccttcgccgccgtcaagccggag 378 | ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 160428 tccggctggctccccgacggctcattcgccgccgtcaagccggag 160384 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 129 gctggacagcatcaggcagcacctcatggagga 161 ||||||||||||| |||| |||||| ||||||| Sbjct: 160630 gctggacagcatccggcaccacctcctggagga 160598
>ref|XM_473403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 93.7 bits (47), Expect = 5e-16 Identities = 128/155 (82%) Strand = Plus / Plus Query: 229 agcttcggaagcctggtggcggaccagtggagcgagtcgctcccgttccgcgccgacgac 288 |||||||| ||||||||||| ||| ||||||||| ||||| |||||||||| ||||||| Sbjct: 115 agcttcgggagcctggtggccgacatgtggagcgactcgctgccgttccgcgacgacgac 174 Query: 289 tcggacgacatggtcgtctacggcgccctccgcgacgccttctcctgcggctggctcccc 348 | ||||||||||| || | |||||| | || ||||| ||||| ||||| ||||| ||| Sbjct: 175 gccgacgacatggtggtgttcggcgcgatgcgggacgcgttctcgtgcgggtggctgccc 234 Query: 349 gacggctccttcgccgccgtcaagccggagcccct 383 |||||| ||||| | || |||||||||||||| Sbjct: 235 gacggcgtgttcgcggaggtgaagccggagcccct 269
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 93.7 bits (47), Expect = 5e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 229 agcttcggaagcctggtggcggaccagtggagcgagtcgctcccgttccgcgccgacgac 288 |||||||| ||||||||||| ||| ||||||||| ||||| |||||||||| ||||||| Sbjct: 82013 agcttcgggagcctggtggccgacatgtggagcgactcgctgccgttccgcgacgacgac 81954 Query: 289 tcggacgacatggtcgtctacggcgccctccgcgacgccttctcctgcggctggctcccc 348 | ||||||||||| || | |||||| | || ||||| ||||| ||||| ||||| ||| Sbjct: 81953 gccgacgacatggtggtgttcggcgcgatgcgggacgcgttctcgtgcgggtggctgccc 81894 Query: 349 gacggctccttcgccgccgtcaagccggagcccct 383 |||||| ||||| | || |||||||||||||| Sbjct: 81893 gacggcgtgttcgcggaggtgaagccggagcccct 81859
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 5e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 229 agcttcggaagcctggtggcggaccagtggagcgagtcgctcccgttccgcgccgacgac 288 |||||||| ||||||||||| ||| ||||||||| ||||| |||||||||| ||||||| Sbjct: 27346085 agcttcgggagcctggtggccgacatgtggagcgactcgctgccgttccgcgacgacgac 27346026 Query: 289 tcggacgacatggtcgtctacggcgccctccgcgacgccttctcctgcggctggctcccc 348 | ||||||||||| || | |||||| | || ||||| ||||| ||||| ||||| ||| Sbjct: 27346025 gccgacgacatggtggtgttcggcgcgatgcgggacgcgttctcgtgcgggtggctgccc 27345966 Query: 349 gacggctccttcgccgccgtcaagccggagcccct 383 |||||| ||||| | || |||||||||||||| Sbjct: 27345965 gacggcgtgttcgcggaggtgaagccggagcccct 27345931
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcgg 190 ||||||||||||||||| ||||||||| Sbjct: 71930 cggcggccgcggcgccgccgctggcgg 71956
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcgg 190 ||||||||||||||||| ||||||||| Sbjct: 5774 cggcggccgcggcgccgccgctggcgg 5800
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 cggcgccggcgctggcggaggcg 195 ||||||||||||||||||||||| Sbjct: 1237105 cggcgccggcgctggcggaggcg 1237083
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcgg 190 ||||||||||||||||| ||||||||| Sbjct: 6222496 cggcggccgcggcgccgccgctggcgg 6222522
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Minus Query: 163 acggcggccgcggcgccggcgctggcg 189 ||||| ||||||||||||||||||||| Sbjct: 24445100 acggctgccgcggcgccggcgctggcg 24445074 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cggccgcggcgccggcgctggcggaggc 194 |||| |||||| |||||||||||||||| Sbjct: 22104183 cggctgcggcggcggcgctggcggaggc 22104210
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Minus Query: 163 acggcggccgcggcgccggcgctggcg 189 ||||| ||||||||||||||||||||| Sbjct: 60816 acggctgccgcggcgccggcgctggcg 60790
>ref|NM_209755.1| Eremothecium gossypii ADR306Wp (ADR306W), mRNA Length = 1227 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 cggcgccggcgctggcggaggcg 195 ||||||||||||||||||||||| Sbjct: 811 cggcgccggcgctggcggaggcg 789
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcgg 190 ||||||||||||||||| ||||||||| Sbjct: 6288963 cggcggccgcggcgccgccgctggcgg 6288989
>ref|XM_479598.1| Oryza sativa (japonica cultivar-group), mRNA Length = 192 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcg 189 ||||||| |||||||||||||||||| Sbjct: 42 cggcggcagcggcgccggcgctggcg 67
>ref|XM_654352.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1840.2), mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 cacggcggccgcggcgccggcgctgg 187 ||||||||||||||||||| |||||| Sbjct: 705 cacggcggccgcggcgccgtcgctgg 680
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcg 189 ||||||| |||||||||||||||||| Sbjct: 29129390 cggcggcagcggcgccggcgctggcg 29129415
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcg 189 ||||||| |||||||||||||||||| Sbjct: 64508 cggcggcagcggcgccggcgctggcg 64533
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcg 189 ||||||| |||||||||||||||||| Sbjct: 77347 cggcggcagcggcgccggcgctggcg 77372
>gb|AY398368.1| Danio rerio clone RK066A1B03 KIAA0103-like protein mRNA, complete cds Length = 1435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1008 cacccacagaccagaccaccc 1028
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 acggcggccgcggcgccggcg 183 ||||||||||||||||||||| Sbjct: 972038 acggcggccgcggcgccggcg 972058
>ref|NM_192710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1851 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ggcgccctccgcgacgccttc 330 ||||||||||||||||||||| Sbjct: 145 ggcgccctccgcgacgccttc 165
>gb|BT016570.1| Zea mays clone Contig403 mRNA sequence Length = 1313 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 146 cggcggccgcggcgccggcgc 166
>gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete sequence Length = 192132 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 121190 cggcaaggatgctgctgaaaccggc 121214
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgccggcgctggcggaggcga 196 ||||||||||||||||||||| Sbjct: 59830 cgccggcgctggcggaggcga 59810
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 162 cacggcggccgcggcgccggcgctggcgg 190 |||||||||||||||| |||||| ||||| Sbjct: 1521162 cacggcggccgcggcggcggcgccggcgg 1521190
>gb|BC060910.1| Danio rerio cDNA clone IMAGE:4144140, **** WARNING: chimeric clone **** Length = 2260 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 991 cacccacagaccagaccaccc 1011
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 272161 cggcggccgcggcgccggcgc 272181
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 184509 cggcggccgcggcgccggcgc 184529
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 26239 cggcggccgcggcgccggcgc 26259
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 ggacacggcggccgcggcgccggcg 183 ||||||| ||||||||||||||||| Sbjct: 70625 ggacacgccggccgcggcgccggcg 70601
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 162 cacggcggccgcggcgccggcgctggcgg 190 |||||||||||||||| |||||| ||||| Sbjct: 382362 cacggcggccgcggcggcggcgccggcgg 382334
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgccggcgctggcggaggcga 196 ||||||||||||||||||||| Sbjct: 14112275 cgccggcgctggcggaggcga 14112255 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctggcgga 191 ||||||| |||||||||||| ||||||| Sbjct: 16567200 cggcggcggcggcgccggcgatggcgga 16567173
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ggcgccctccgcgacgccttc 330 ||||||||||||||||||||| Sbjct: 23966012 ggcgccctccgcgacgccttc 23966032
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggcgccggcgctggcgga 191 ||||||||||||||||||||| Sbjct: 4575871 cgcggcgccggcgctggcgga 4575891 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ggaggcgaggaggcagaggccggc 212 ||||||||||||| |||||||||| Sbjct: 1777676 ggaggcgaggaggaagaggccggc 1777653
>ref|NM_213544.1| Danio rerio zgc:86891 (zgc:86891), mRNA Length = 1435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1008 cacccacagaccagaccaccc 1028
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ggcgccctccgcgacgccttc 330 ||||||||||||||||||||| Sbjct: 112416 ggcgccctccgcgacgccttc 112436
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ggcgccctccgcgacgccttc 330 ||||||||||||||||||||| Sbjct: 80534 ggcgccctccgcgacgccttc 80554
>ref|NM_208338.1| Eremothecium gossypii ABR039Wp (ABR039W), mRNA Length = 936 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 272 cggcggccgcggcgccggcgc 292
>gb|BC071517.1| Danio rerio zgc:86891, mRNA (cDNA clone MGC:86891 IMAGE:6904662), complete cds Length = 1443 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1007 cacccacagaccagaccaccc 1027
>dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D08, full insert sequence Length = 1230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgccggcgctggcggaggcga 196 ||||||||||||||||||||| Sbjct: 583 cgccggcgctggcggaggcga 563
>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete sequence Length = 257666 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 84182 cggcaaggatgctgctgaaaccggc 84206
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 4138576 cggcggccgcggcgccggcgc 4138596 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gccgcggcgccggcgctggcg 189 ||||||||||||||||||||| Sbjct: 2767963 gccgcggcgccggcgctggcg 2767983
>gb|AC002474.1|AC002474 Drosophila melanogaster DNA sequence (P1 DS05709 (D73)), complete sequence Length = 44834 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 23747 cggcaaggatgctgctgaaaccggc 23723
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgc 184 ||||||||||||||||||||| Sbjct: 469365 cggcggccgcggcgccggcgc 469385
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 gccgcggcgccggcgctggcggaggcga 196 ||||||||| |||||| ||||||||||| Sbjct: 87208 gccgcggcggcggcgccggcggaggcga 87235
>ref|XM_482712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cggccgcggcgccggcgctggcggaggc 194 |||| |||||| |||||||||||||||| Sbjct: 281 cggctgcggcggcggcgctggcggaggc 308
>ref|XM_450839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 539 cggcggccgcggcgccggcg 520
>ref|NM_196986.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0001K12.4), mRNA Length = 567 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gcggcgccggcgctggcggaggcg 195 |||||| ||||||||||||||||| Sbjct: 148 gcggcggcggcgctggcggaggcg 171
>ref|NM_196118.1| Oryza sativa (japonica cultivar-group) putative AP2-domain transcriptional regulator (OJ1208D02.13), mRNA Length = 966 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 843 cggcggccgcggcgccggcg 824
>ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctgg 187 ||||||| |||||||||||||||| Sbjct: 275 cggcggcggcggcgccggcgctgg 298
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctggcgga 191 ||||||| |||||||||||| ||||||| Sbjct: 65939 cggcggcggcggcgccggcgatggcgga 65912
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 |||||||||||||| |||||||||||||||| Sbjct: 913744 cggcggccgcggcga-ggcgctggcggaggcg 913774
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 10723 ggccgcggcgccggcggtggcggcggcg 10696
>gb|AY518936.1| Toxoplasma gondii eukaryotic initiation factor-2 alpha kinase-A mRNA, complete cds Length = 15219 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||| |||||||||||| || |||||||||| Sbjct: 10533 cggcgcccgcggcgccggagccggcggaggcg 10564
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctgg 187 ||||||| |||||||||||||||| Sbjct: 35558488 cggcggcggcggcgccggcgctgg 35558511
>ref|XM_987767.1| PREDICTED: Mus musculus ring finger protein 187 (Rnf187), mRNA Length = 2111 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 501 ggcggccgcggcgccggcgc 520
>ref|XM_992215.1| PREDICTED: Mus musculus ring finger protein 187 (Rnf187), mRNA Length = 2261 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 651 ggcggccgcggcgccggcgc 670
>ref|XM_905766.2| PREDICTED: Mus musculus ring finger protein 187 (Rnf187), mRNA Length = 2084 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 474 ggcggccgcggcgccggcgc 493
>gb|AC126042.3| Mus musculus BAC clone RP24-303J10 from chromosome 18, complete sequence Length = 173064 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gcggccgcggcgccggcgct 185 |||||||||||||||||||| Sbjct: 148492 gcggccgcggcgccggcgct 148511
>gb|AC133186.4| Mus musculus BAC clone RP23-320D8 from chromosome 18, complete sequence Length = 209380 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gcggccgcggcgccggcgct 185 |||||||||||||||||||| Sbjct: 14983 gcggccgcggcgccggcgct 15002
>emb|CR955034.5| Wallaby DNA sequence from clone GRWB-130P10, complete sequence Length = 176287 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||||| |||||| ||| ||||||||||||| Sbjct: 100340 cggcggcggcggcggcggggctggcggaggcg 100371
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cgccgccgtcaagccggagc 379 |||||||||||||||||||| Sbjct: 537902 cgccgccgtcaagccggagc 537883
>emb|AL445237.16| Human DNA sequence from clone RP13-238F13 on chromosome 10 Contains the OAT gene for ornithine aminotransferase (gyrate atrophy), a homeobox protein pseudogene, the 5' end of the LHPP gene for phospholysine phosphohistidine inorganic pyrophosphate phosphatase, a RPS10 (40S ribosomal protein 10) pseudogene and four CpG islands, complete sequence Length = 182955 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gcggccgcggcgccggcgctggcg 189 ||||||||||||||||||| |||| Sbjct: 132920 gcggccgcggcgccggcgccggcg 132943
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 2411868 cggcggccgcggcgccggcg 2411887
>gb|DQ421814.1| Oryza meridionalis voucher IRGC 101145 shattering (sh4) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||||||||| |||||||| |||||||||| Sbjct: 1231 cggcggccgcgccgccggcggcggcggaggcg 1200
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 24725 cggcggccgcggcgccggcg 24706
>ref|XM_963347.1| PREDICTED: Tribolium castaneum similar to Butyrate response factor 1 (TIS11B protein) (EGF-inducible protein CMG1) (LOC656846), mRNA Length = 883 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctgg 187 |||||||||||||| ||||||||| Sbjct: 253 cggcggccgcggcggcggcgctgg 230
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 991831 ggccgcggcgccggcggtggcggcggcg 991858
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 acggcggccgcggcgccggcgctg 186 ||||||||||| |||||||||||| Sbjct: 127437 acggcggccgccgcgccggcgctg 127414
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 acggcggccgcggcgccggcgctg 186 ||||||||||| |||||||||||| Sbjct: 38334 acggcggccgccgcgccggcgctg 38311
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 acggcggccgcggcgccggcgctg 186 ||||||||||| |||||||||||| Sbjct: 323757 acggcggccgccgcgccggcgctg 323734
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ccgcggcgccggcgctggcggagg 193 ||||||||||||||| |||||||| Sbjct: 42363 ccgcggcgccggcgccggcggagg 42340
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgacgactcggacgacatgg 301 |||||||||||||||||||| Sbjct: 96274 cgacgactcggacgacatgg 96255
>gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, complete sequence Length = 115289 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcgga 191 ||||||| |||||| ||||||||||||| Sbjct: 112150 cggcggcggcggcggcggcgctggcgga 112177
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence Length = 236367 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcgctggcggaggcgaggaggcag 204 |||| ||||||||||||||||||| Sbjct: 125322 gcgcgggcggaggcgaggaggcag 125299
>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: K1 Length = 45779 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gcgccggcgctggcggaggc 194 |||||||||||||||||||| Sbjct: 32269 gcgccggcgctggcggaggc 32250
>emb|CR617170.1| full-length cDNA clone CS0DJ011YC01 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1506 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||||| |||||| ||||| ||||||||||| Sbjct: 11 cggcggcggcggcggcggcggtggcggaggcg 42
>ref|NM_172632.2| Mus musculus mitogen-activated protein kinase 4 (Mapk4), mRNA Length = 4660 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gcggccgcggcgccggcgct 185 |||||||||||||||||||| Sbjct: 78 gcggccgcggcgccggcgct 59
>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1208D02 from chromosome 10, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 84857 cggcggccgcggcgccggcg 84838
>gb|AC087639.7| Homo sapiens chromosome 15, clone RP11-696L21, complete sequence Length = 190015 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cacggcggccgcggcgccgg 181 |||||||||||||||||||| Sbjct: 142532 cacggcggccgcggcgccgg 142551
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete sequence Length = 208903 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcgctggcggaggcgaggaggcag 204 |||| ||||||||||||||||||| Sbjct: 1618 gcgcgggcggaggcgaggaggcag 1595
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gcggcgccggcgctggcggaggcg 195 |||||| ||||||||||||||||| Sbjct: 29406 gcggcggcggcgctggcggaggcg 29429
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 3377264 cggcggccgcggcgccggcg 3377283 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 cggccgcggcgccggcgctggcgg 190 ||||||||||||| |||||||||| Sbjct: 1705151 cggccgcggcgccagcgctggcgg 1705128
>gb|DQ377064.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 2 mRNA, complete cds, alternatively spliced Length = 3284 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 85 ggccgcggcgccggcggtggcggcggcg 58
>gb|DQ377063.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 1 mRNA, complete cds, alternatively spliced Length = 3443 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 85 ggccgcggcgccggcggtggcggcggcg 58
>gb|DQ377062.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K mRNA, complete cds, alternatively spliced Length = 1815 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 85 ggccgcggcgccggcggtggcggcggcg 58
>gb|BC096522.1| Mus musculus ring finger protein 187, mRNA (cDNA clone IMAGE:6808602), partial cds Length = 1922 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 317 ggcggccgcggcgccggcgc 336
>dbj|AK088973.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430034D11 product:UNKNOWN PROTEIN (FRAGMENT) homolog [Mus musculus], full insert sequence Length = 1938 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 356 ggcggccgcggcgccggcgc 375
>dbj|AK046051.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230337P13 product:unclassifiable, full insert sequence Length = 361 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gcggccgcggcgccggcgct 185 |||||||||||||||||||| Sbjct: 50 gcggccgcggcgccggcgct 31
>dbj|AK079654.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330097D03 product:MITOGEN-ACTIVATED PROTEIN KINASE 4 (EC 2.7.1.-) (EXTRACELLULAR SIGNAL- REGULATED KINASE 4) (ERK-4) (MAP KINASE ISOFORM P63) (P63-MAPK) homolog [Homo sapiens], full insert sequence Length = 4589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gcggccgcggcgccggcgct 185 |||||||||||||||||||| Sbjct: 58 gcggccgcggcgccggcgct 39
>dbj|AK037991.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130069L14 product:hypothetical protein, clone 2-24, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 268 ggcggccgcggcgccggcgc 287
>dbj|AK076158.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3200002F23 product:hypothetical protein, full insert sequence Length = 1929 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 343 ggcggccgcggcgccggcgc 362
>dbj|AK075944.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410016F01 product:hypothetical protein, clone 2-24, full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 364 ggcggccgcggcgccggcgc 383
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 303 cgtctacggcgccctccgcgacgccttc 330 |||||||| |||| |||||||||||||| Sbjct: 1543618 cgtctacgtcgccgtccgcgacgccttc 1543645
>dbj|AK033568.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130001M15 product:unclassifiable, full insert sequence Length = 3872 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cacggcggccgcggcgccggcgct 185 ||||||||||||||||| |||||| Sbjct: 26 cacggcggccgcggcgctggcgct 3
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gcggcgccggcgctggcggaggcg 195 |||||| ||||||||||||||||| Sbjct: 17162930 gcggcggcggcgctggcggaggcg 17162907 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 11216737 cggcggccgcggcgccggcg 11216718 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 991831 ggccgcggcgccggcggtggcggcggcg 991858
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 gccgcggcgccggcgctggcggaggcga 196 ||||||||| |||||| ||||||||||| Sbjct: 19367982 gccgcggcggcggcgccggcggaggcga 19368009 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 13101544 cggcggccgcggcgccggcg 13101563 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 |||||||||||||| ||||| |||||||||| Sbjct: 11889167 cggcggccgcggcggcggcggaggcggaggcg 11889198
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 ccgcggcgccggcgctggcggaggcgaggagg 201 ||||||||||||||| |||| |||||||||| Sbjct: 19800096 ccgcggcgccggcgccggcgacggcgaggagg 19800127
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctgg 187 ||||||| |||||||||||||||| Sbjct: 35648560 cggcggcggcggcgccggcgctgg 35648583
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cggaggcgctggtgctggac 135 |||||||||||||||||||| Sbjct: 15008 cggaggcgctggtgctggac 14989
>gb|AC004623.2|AC004623 Homo sapiens chromosome 19, cosmid R28991 (LLNLR-250H3) and overlapping PCR product, complete sequence Length = 37000 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||||| |||||| ||||| ||||||||||| Sbjct: 15072 cggcggcggcggcggcggcggtggcggaggcg 15103
>gb|AC098820.3| Homo sapiens BAC clone RP11-253L15 from 2, complete sequence Length = 155669 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 36943 cggcggccgcggcgccggcg 36924
>ref|XM_340805.2| PREDICTED: Rattus norvegicus similar to tripartite motif protein 11 (predicted) (LOC360533), mRNA Length = 2067 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 486 ggcggccgcggcgccggcgc 505
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctgg 187 ||||||| |||||||||||||||| Sbjct: 91451 cggcggcggcggcgccggcgctgg 91474
>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence Length = 180573 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gaggcgaggaggcagaggcc 209 |||||||||||||||||||| Sbjct: 139197 gaggcgaggaggcagaggcc 139178
>gb|AF220951.1|AF220951 Streptomyces antibioticus 8,8a-deoxyoleandolide synthase 1 (oleAI) and 8,8a-deoxyoleandolide synthase 2 (oleAII) genes, complete cds Length = 24568 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gctacggcggtttcctctac 420 |||||||||||||||||||| Sbjct: 18078 gctacggcggtttcctctac 18097
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggcggccgcggcgccggcgctggc 188 |||||||||||||| ||||||||| Sbjct: 2865238 ggcggccgcggcgctggcgctggc 2865215
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 ccgcggcgccggcgctggcggaggcgaggagg 201 ||||||||||||||| |||| |||||||||| Sbjct: 67141 ccgcggcgccggcgccggcgacggcgaggagg 67172
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 |||||||||||||| ||||| |||||||||| Sbjct: 70657 cggcggccgcggcggcggcggaggcggaggcg 70688
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 23634 cggcggccgcggcgccggcg 23653
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cggccgcggcgccggcgctggcggaggc 194 |||| |||||| |||||||||||||||| Sbjct: 67146 cggctgcggcggcggcgctggcggaggc 67173
>dbj|AK121007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046L24, full insert sequence Length = 1798 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 85 ggccgcggcgccggcggtggcggcggcg 58
>dbj|AK110881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G09, full insert sequence Length = 2047 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 gccgcggcgccggcgctggcggaggcga 196 ||||||||| |||||| ||||||||||| Sbjct: 170 gccgcggcggcggcgccggcggaggcga 197
>dbj|AK109530.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B05, full insert sequence Length = 804 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 ccgcggcgccggcgctggcggaggcgaggagg 201 ||||||||||||||| |||| |||||||||| Sbjct: 147 ccgcggcgccggcgccggcgacggcgaggagg 116
>emb|AJ334256.1|HSA334256 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DM15C Length = 791 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctggcggaggcg 195 ||||||| |||||| ||||| ||||||||||| Sbjct: 92 cggcggcggcggcggcggcggtggcggaggcg 61
>dbj|AK100686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113P16, full insert sequence Length = 3436 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 96 ggccgcggcgccggcggtggcggcggcg 69
>emb|AJ323660.1|HSA323660 Homo sapiens genomic sequence surrounding NotI site, clone NB6-577C Length = 623 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gcggccgcggcgccggcgctggcg 189 ||||||||||||||||||| |||| Sbjct: 1 gcggccgcggcgccggcgccggcg 24
>emb|AJ330664.1|HSA330664 Homo sapiens genomic sequence surrounding NotI site, clone NB6-1088R Length = 968 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gcggccgcggcgccggcgctggcg 189 ||||||||||||||||||| |||| Sbjct: 1 gcggccgcggcgccggcgccggcg 24
>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full insert sequence Length = 1360 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcggccgcggcgccggcgctgg 187 ||||||| |||||||||||||||| Sbjct: 314 cggcggcggcggcgccggcgctgg 337
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 cacggcggccgcggcgccggcgct 185 |||||||||||||||| ||||||| Sbjct: 1093657 cacggcggccgcggcgacggcgct 1093680
>dbj|AK065210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F20, full insert sequence Length = 743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 541 cggcggccgcggcgccggcg 522
>emb|BX908791.12| Zebrafish DNA sequence from clone DKEY-261H15 in linkage group 18, complete sequence Length = 66694 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tcagctcacccacagaccagacca 62 ||||||||||||| |||||||||| Sbjct: 52473 tcagctcacccactgaccagacca 52450
>dbj|AK059504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A09, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 84 ggccgcggcgccggcggtggcggcggcg 57
>gb|AF035193.1|AF035193 Campylobacter rectus S-layer-RTX protein (csxA) gene, complete cds Length = 4649 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctccttcgccgccgtcaagc 373 |||||||||||||||||||| Sbjct: 2242 ctccttcgccgccgtcaagc 2223
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ggcggccgcggcgccggcgctggcggag 192 ||||||||||||| ||||| |||||||| Sbjct: 5220 ggcggccgcggcggcggcggtggcggag 5193
>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete sequence Length = 170444 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 cacggcggccgcggcgccggcgct 185 ||||||||||||||||| |||||| Sbjct: 63363 cacggcggccgcggcgctggcgct 63386
>gb|AY655709.1| Rubrivivax gelatinosus cytochrome bd-type quinol oxidase subunit 1 (qoxA), cytochrome bd-type quinol oxidase subunit 2 (qoxB), hypothetical protein, and putative endoribonuclease genes, complete cds Length = 4440 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 acacggcggccgcggcgccggcgc 184 ||||||||||||| |||||||||| Sbjct: 3543 acacggcggccgcagcgccggcgc 3520
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gcggcgccggcgctggcggaggcg 195 |||||| ||||||||||||||||| Sbjct: 17171970 gcggcggcggcgctggcggaggcg 17171947 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcg 183 |||||||||||||||||||| Sbjct: 11223177 cggcggccgcggcgccggcg 11223158 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ggccgcggcgccggcgctggcggaggcg 195 |||||||||||||||| |||||| |||| Sbjct: 991828 ggccgcggcgccggcggtggcggcggcg 991855
>gb|AC005335.1|AC005335 Homo sapiens chromosome 19, cosmid R34296, complete sequence Length = 47003 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 164 cggcggccgcggcgccggcgctggcgga 191 ||||||| |||||| ||||||||||||| Sbjct: 39178 cggcggcggcggcggcggcgctggcgga 39151
>gb|BC072613.1| Mus musculus ring finger protein 187, mRNA (cDNA clone MGC:99950 IMAGE:6807364), complete cds Length = 1964 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 346 ggcggccgcggcgccggcgc 365
>emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chromosome 11, complete sequence Length = 103129 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 23026 ggcggccgcggcgccggcgc 23007
>dbj|AB030190.1| Mus musculus mRNA, complete cds, clone:2-24 Length = 1961 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcggccgcggcgccggcgc 184 |||||||||||||||||||| Sbjct: 345 ggcggccgcggcgccggcgc 364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,711,827 Number of Sequences: 3902068 Number of extensions: 3711827 Number of successful extensions: 86658 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82923 Number of HSP's gapped (non-prelim): 3731 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
