ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55b11 |
|---|---|
| Clone Library Name | barley_pub |
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/44 (61%), Positives = 29/44 (65%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG+NTAALSTALFNN Sbjct: 27 NAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNN 70
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/44 (61%), Positives = 29/44 (65%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG+NTAALSTALFNN Sbjct: 33 NAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNN 76
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 56.6 bits (135), Expect = 1e-08 Identities = 27/44 (61%), Positives = 29/44 (65%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG+NTAALSTALFNN Sbjct: 29 NAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNN 72
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/44 (61%), Positives = 28/44 (63%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG NTAALSTALFNN Sbjct: 34 NAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNN 77
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/44 (61%), Positives = 28/44 (63%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG NTAALSTALFNN Sbjct: 38 NAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNN 81
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/44 (61%), Positives = 28/44 (63%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG NTAALSTALFNN Sbjct: 33 TAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNN 76
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 54.7 bits (130), Expect = 5e-08 Identities = 26/44 (59%), Positives = 29/44 (65%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG++TAALSTALFNN Sbjct: 28 NAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNN 71
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/44 (56%), Positives = 29/44 (65%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 +AHATFY YGNLYS GYG+NTAALST+LFN+ Sbjct: 36 TAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNS 79
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/42 (59%), Positives = 26/42 (61%) Frame = +3 Query: 249 HATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 HATFY YGNLY GYG+NTAALSTALFNN Sbjct: 34 HATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNN 75
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 51.6 bits (122), Expect = 5e-07 Identities = 25/43 (58%), Positives = 27/43 (62%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFN 371 +A ATFY YGNLYS GYG+NTAALSTALFN Sbjct: 31 NARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFN 73
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 50.4 bits (119), Expect = 1e-06 Identities = 24/43 (55%), Positives = 27/43 (62%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 AHATFY YGNLY+ GY +NTAALSTALFN+ Sbjct: 31 AHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFND 73
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/44 (52%), Positives = 27/44 (61%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 + HATFY YG+LYS GYG+ TAALSTALFN+ Sbjct: 28 NGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFND 71
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/43 (55%), Positives = 26/43 (60%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFN 371 +AHATFY YGNLYS GYG TAALSTALF+ Sbjct: 40 NAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFD 82
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/42 (54%), Positives = 25/42 (59%) Frame = +3 Query: 249 HATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 HATFY YGNL+S GYG TAALSTALFN+ Sbjct: 36 HATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNS 77
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 47.4 bits (111), Expect = 9e-06 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 AHATFY YGNL+++GYG +TAALST LFN+ Sbjct: 40 AHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFND 82
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/43 (48%), Positives = 24/43 (55%) Frame = +3 Query: 243 SAHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFN 371 +A ATFY YGN+Y +GYG T ALSTALFN Sbjct: 33 TASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFN 75
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 42.7 bits (99), Expect = 2e-04 Identities = 22/43 (51%), Positives = 24/43 (55%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 A ATFY YGNL+ GYG TAALSTALFN+ Sbjct: 61 ARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFND 103
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 42.7 bits (99), Expect = 2e-04 Identities = 22/43 (51%), Positives = 24/43 (55%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 A ATFY YGNL+ GYG TAALSTALFN+ Sbjct: 55 ARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFND 97
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 Query: 252 ATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 ATFY YG+L+ GYG TAALSTALFNN Sbjct: 95 ATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNN 135
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/42 (50%), Positives = 23/42 (54%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFN 371 A ATFY YG+L+ GYG TAALSTALFN Sbjct: 58 ARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFN 99
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/42 (50%), Positives = 23/42 (54%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFN 371 A ATFY YG+L+ GYG TAALSTALFN Sbjct: 51 ARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFN 92
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 35.4 bits (80), Expect = 0.034 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALFNN 374 AHAT+Y Y N Y G+G++TAALS LF + Sbjct: 30 AHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRS 72
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 33.9 bits (76), Expect = 0.099 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = +3 Query: 306 YGNLYSTGYGSNTAALSTALFNN 374 YG+L GYG TAALSTALFN+ Sbjct: 63 YGDLNKHGYGLATAALSTALFNS 85
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 30.8 bits (68), Expect = 0.84 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 Query: 246 AHATFYXXXXXXXXXXXXXXYGNLYSTGYGSNTAALSTALF 368 A AT+Y YG+L +GYG T LS LF Sbjct: 43 ARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLF 83
>UL49_BHV1C (P30022) Tegument protein UL49 homolog| Length = 258 Score = 30.8 bits (68), Expect = 0.84 Identities = 21/53 (39%), Positives = 24/53 (45%) Frame = +1 Query: 133 PVGRGVARTCPGTAWSIGTGLASVTTPTRRSAVAPGRPLTPPSTAAVTLPAPW 291 PV R R G A ++ G P +AVA GRPL S A T APW Sbjct: 110 PVLRPATRGSSGGAGAVAVGPPRPRAPPGANAVASGRPLA-FSAAPKTPKAPW 161
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -1 Query: 260 EGGVSGRPGATAERRVGVVTDARPVPMDQAVPGQVRATPLPTG 132 +GG+ G PG + R G TDA +PM VPG R L G Sbjct: 157 DGGLIGMPGLKFKIRGG--TDATGIPMHPGVPGSGRYKVLLAG 197
>VGLE_BHV1S (Q08101) Glycoprotein E precursor| Length = 575 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +1 Query: 199 SVTTPTRRSAVA-----PGRPLTPPSTAAVTLPAPW 291 +VT TR A A PG PLT A T PAPW Sbjct: 388 AVTDHTRPEAAAADAPEPGPPLTSEPAGAPTGPAPW 423
>SECF_MYCLE (P38386) Protein-export membrane protein secF| Length = 471 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 151 ARTCPGTAWSIGTGLASVTTPTRRSAVAPG-RPLTPPSTAAVT 276 A +C + GT +A+ + PT S +APG RP+ P T T Sbjct: 420 AESCADASSQEGTEVATASVPTVLSKLAPGVRPVRPTGTRRPT 462
>SP15_STRGR (P19471) 55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and| ORF1422) Length = 529 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Frame = -1 Query: 284 AGSVTAAVEGGVSGRPGATAERRVGVVTDARPVPM---DQAVPGQVRATPLPTG 132 A + GG SG PG R G DAR + A PG + PL G Sbjct: 162 AQAAILGARGGGSGSPGGAGARGPGAAPDARGAHLLHPGGATPGAAGSVPLQPG 215
>SOX3_HUMAN (P41225) Transcription factor SOX-3| Length = 446 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +1 Query: 148 VARTCPGTAWSIGTGLASVTTPTRRSAVAPGRPLTPPSTAAVTLPAP 288 +A P +A + GL +V P APG P +PP+T A LPAP Sbjct: 35 LAHRPPSSAPTESQGLFTVAAP------APGAP-SPPATLAHLLPAP 74
>BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 protein) (O27.1.1)| Length = 801 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 196 ASVTTPTRRSAVAPGRPLTPPST 264 A TTPT + +APG P +PP + Sbjct: 283 ADTTTPTPTAILAPGSPASPPGS 305
>UROL1_HUMAN (Q5DID0) Uromodulin-like 1 precursor (Olfactorin)| Length = 1318 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = +1 Query: 124 LLCPVGRGVARTCPGTAWSIGTGLASVTTPTRRSAVAPGRPLTPPSTAAVTLPAP 288 L+ P+G G++ T +GTG A++ + +PG P P+ P P Sbjct: 555 LVSPMGGGLSAATGVTVPGLGTGTAALGLENFTLSPSPGYPQGTPAAGQAWTPEP 609
>UL52_PRVKA (Q85228) DNA helicase/primase complex protein (DNA replication| protein UL52) Length = 962 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 257 GGVSGRPGATAERRVGVVTDARPVPMDQAVPGQVRATPLPT 135 GG G PGA+A R V D RP +A G TP+P+ Sbjct: 655 GGAGGDPGASALVRAPVPADERPPCGCRAKMGFRVCTPVPS 695
>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog| Length = 141 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +1 Query: 121 RLLCPV-GRGVARTCPGTAWSIGTGLASVTTPTRRSAVAPGRPLTPPSTAAVTLPAPWAE 297 +LL P+ G+ + P A PT AV P PP+ AA T P+P +E Sbjct: 77 KLLAPLTGQNPPQETPPPAAESPAPSVPTPPPTSTPAVPPADAAAPPAVAASTPPSPPSE 136
>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2| Length = 803 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 196 ASVTTPTRRSAVAPGRPLTPPST 264 A TTPT + +APG P +PP + Sbjct: 283 ADTTTPTPTAILAPGSPASPPGS 305
>NETB_DROME (Q24568) Netrin-B precursor| Length = 793 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Frame = +1 Query: 193 LASVTTPTRRSAVAPGRPLTPPSTA-------AVTLP 282 LA+ T P + V P +TPPSTA AVTLP Sbjct: 353 LAATTPPQQPPKVTPPGKVTPPSTAAPSAAASAVTLP 389
>SCMH1_HUMAN (Q96GD3) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)| Length = 660 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%) Frame = +3 Query: 3 PTALHTPPPASPRTRLP---LSTVPMXXXXXXXXXXXXXXXXXXXXSRGQGRGPHL 161 P L PPPASP T P STVP G GPHL Sbjct: 319 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNG-STGPHL 373
>MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)| Length = 89 Score = 27.7 bits (60), Expect = 7.1 Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 19/70 (27%) Frame = -1 Query: 293 AHGAGSVTAAVEGGV-------------------SGRPGATAERRVGVVTDARPVPMDQA 171 A G GS TA+ GG SG PG T R G R P Sbjct: 20 AGGTGSPTASARGGTPGGSEGFTAAPGSESTGGHSGAPGTTLAGRAGTTLGPRSEPSGTG 79 Query: 170 VPGQVRATPL 141 V G AT L Sbjct: 80 VGGSPVATTL 89
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 163 PGTAWSIGTGLASVTTPTRRSAVAPGRPLTPPSTAAVT 276 PGTA + +++ TTPT + G +TP S T Sbjct: 4550 PGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTT 4587
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = +1 Query: 145 GVARTCPGTAWSIGTGLA----SVTTPTRRSAVAPGRPLTPP 258 G A+ A S+GTG+A S P SA APG PP Sbjct: 73 GSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPP 114
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = +1 Query: 184 GTGLASVTTPTRR-SAVAPGRPLTPPSTAAVTLPA 285 G S PT+ S GRPL PP T+A PA Sbjct: 481 GLAKPSAQQPTKSISQTVTGRPLQPPPTSAAQTPA 515
>RS11_PELCD (Q3A6M2) 30S ribosomal protein S11| Length = 131 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -1 Query: 290 HGAGSVTAAVEGGVSGRPGA-----TAERRVGVVTDARPVPMDQAVPGQVR 153 HG SV V+G SGR A +A + V+ D P+P + P + R Sbjct: 79 HGLRSVEVRVKGPGSGRESALRALSSAGLNISVIKDVTPIPHNGCRPPKRR 129
>RPOC2_NEPOL (Q9TL04) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1463 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 118 SRLLCPVGRGVARTCPGTAWSIGTG 192 S LLC RG+ R C G W++GTG Sbjct: 308 SVLLCKSKRGLCRLCYG--WNLGTG 330
>RS11_STRR6 (P66360) 30S ribosomal protein S11| Length = 127 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -1 Query: 290 HGAGSVTAAVEGGVSGRPG-----ATAERRVGVVTDARPVPMDQAVPGQVR 153 HG SV V+G SGR A A V + D PVP + A P + R Sbjct: 75 HGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRR 125
>RS11_STRPN (P66359) 30S ribosomal protein S11| Length = 127 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -1 Query: 290 HGAGSVTAAVEGGVSGRPG-----ATAERRVGVVTDARPVPMDQAVPGQVR 153 HG SV V+G SGR A A V + D PVP + A P + R Sbjct: 75 HGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRR 125
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 284 AGSVTAAVEGGVSGRPGATAERRVGVVTDARPVPMDQAVPG 162 AGS A E G G+PG ER V AR P +PG Sbjct: 141 AGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 181
>Y1350_PROMM (P59919) UPF0284 protein PMT1350| Length = 403 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = -1 Query: 284 AGSVTAAVEGGVSGRPGATAERRVGVVTDARPVPMDQAVPGQVRATPLPTGQS 126 AG+ TA VEG +S +A RR V DA + P PLP G S Sbjct: 57 AGTRTAEVEG-ISAAGATSAARRFTAVADAELLLKGPDRPRLCSLPPLPAGIS 108
>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) (Fragments) Length = 1027 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 3 PTALHTPPPASPRTRLPLSTVP 68 P++ TPPP +PR +L S P Sbjct: 924 PSSQQTPPPVTPRAKLSFSIQP 945
>CAP2_MOUSE (Q9CYT6) Adenylyl cyclase-associated protein 2 (CAP 2)| Length = 476 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 3 PTALHTPPPASPRTRLPLSTVPM 71 PT HTP P SP++ P P+ Sbjct: 301 PTKTHTPSPTSPKSNSPQKHTPV 323
>GUN4_TRIRE (O14405) Endoglucanase-4 precursor (EC 3.2.1.4) (Endoglucanase IV)| (Endo-1,4-beta-glucanase IV) (Cellulase IV) (EGIV) Length = 344 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 157 TCPGTAWSIGTGLASVTTPTRRSAVAPGRP-LTPPSTAAVTLPAP 288 T T G+G S TT T R+ A RP TPP+T + P Sbjct: 263 TASATVPGGGSGPTSRTTTTARTTQASSRPSSTPPATTSAPAGGP 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,650,745 Number of Sequences: 219361 Number of extensions: 496469 Number of successful extensions: 3305 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3303 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
