ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55b06 |
|---|---|
| Clone Library Name | barley_pub |
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 58.2 bits (139), Expect = 1e-08 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 6/59 (10%) Frame = +3 Query: 297 SVPAIPATE-FPRSRGKEHGVSEKTS-----GAYSANGGFPWSNAMLQWQRTGFHFQPD 455 S ++P+++ +P SRG GVSEK+S G A+ FPW N+ML WQRT FHFQP+ Sbjct: 66 SPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHFQPE 124
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 5/46 (10%) Frame = +3 Query: 333 SRGKEHGVSEKTSGA-YSANGG----FPWSNAMLQWQRTGFHFQPD 455 SRG GVSEK+S +S GG FPW N+ML WQRT FHFQP+ Sbjct: 79 SRGVSSGVSEKSSSMLFSGEGGASEAFPWDNSMLSWQRTSFHFQPE 124
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 55.5 bits (132), Expect = 7e-08 Identities = 24/42 (57%), Positives = 28/42 (66%) Frame = +3 Query: 327 PRSRGKEHGVSEKTSGAYSANGGFPWSNAMLQWQRTGFHFQP 452 P SRG GVSEK+ +A +PW+N ML WQRT FHFQP Sbjct: 97 PPSRGVSQGVSEKSFRQATAEPSYPWTNDMLSWQRTSFHFQP 138
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%) Frame = +3 Query: 333 SRGKEHGVSEKT-----SGAYSANGG-FPWSNAMLQWQRTGFHFQPD 455 SRG GVSEK+ SG GG FPW+N ML WQRT FHFQP+ Sbjct: 70 SRGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPE 116
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 51.6 bits (122), Expect = 1e-06 Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Frame = +3 Query: 321 EFPRSRGKEHGVSEKTSGAYSANGG---FPWSNAMLQWQRTGFHFQP 452 E SRG GVSEK++ +G F W+NAML WQRT FHFQP Sbjct: 86 EVAASRGVAEGVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQP 132
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%) Frame = +3 Query: 327 PRSRGKEHGVSEKT--SGAYSANGGFPWSNAMLQWQRTGFHFQP 452 P SRG GVS+KT A +++ + WSNAML WQRT +HFQP Sbjct: 68 PPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQP 111
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/49 (55%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Frame = +3 Query: 312 PATEFPRSRGKEHGVSEKTSGAYSANG--GFPWSNAMLQWQRTGFHFQP 452 PAT SRG GVSEKT S + WSNAML WQRT +HFQP Sbjct: 74 PATP---SRGVSQGVSEKTFKDVSGTSQVSYTWSNAMLNWQRTAYHFQP 119
>CAC1D_DROME (Q24270) Voltage-dependent calcium channel type D alpha-1 subunit| (DmCa1D) Length = 2516 Score = 29.6 bits (65), Expect = 4.1 Identities = 21/54 (38%), Positives = 25/54 (46%) Frame = +3 Query: 27 HPPRDHRACTGGAMDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQRAGGGL 188 HP + A G R +I TP PY +LP+SS D NG E GG L Sbjct: 2290 HPYNNVYAPNGALPGHER--MIQSTPASPYDQRRLPTSS-DMNGLAESLIGGVL 2340
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 370 RGPTPPTAASRGATPCCSGSAPASISSRTVLP 465 RG PPT+A+ TP + PA+ S+ +P Sbjct: 604 RGTVPPTSAANAGTPAPPSATPATPSAAAAVP 635
>KAS1_STRRM (P43678) Oxytetracycline polyketide putative beta-ketoacyl synthase| 1 Length = 425 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 464 GSTVRLEMEAGALPLQHGVAPREAAVGGVGPRCLLRHAVLLA 339 G+ LE+ A AL ++HGV P A + P C L + L+A Sbjct: 353 GAICALEVAASALRIEHGVIPPTANLREPDPDCDLDYVPLVA 394
>TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box protein 1)| (Testis-specific T-box protein) Length = 398 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/60 (26%), Positives = 24/60 (40%) Frame = +3 Query: 3 PSARKQSTHPPRDHRACTGGAMDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQRAGG 182 P ++ PP + C A + PG PP P+AY P++ A + E G Sbjct: 37 PYGPREPPPPPPRYDPCAAAAPGA------PGPPPPPHAYPFAPAAGAATSAAAEPEGPG 90
>CD45_RAT (P04157) Leukocyte common antigen variant 4 precursor (EC 3.1.3.48)| (L-CA) (CD45 antigen) (T200) (Fragment) Length = 1255 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +3 Query: 54 TGGAMDSSRVILIPGTPPLPYAYEQL--PSSSADANGQEE 167 T +D++ ++L+P T PLP + PS S NG E Sbjct: 9 TDDGLDTTEIVLLPQTDPLPARTTEFTPPSISERGNGSSE 48 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,323,768 Number of Sequences: 219361 Number of extensions: 980341 Number of successful extensions: 3855 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3849 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
