ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 577 bits (291), Expect = e-161 Identities = 409/444 (92%), Gaps = 7/444 (1%) Strand = Plus / Plus Query: 32 acctcgggatcatcgggcctgcaccggcggcgccatggattcctctcgcgtcattctcat 91 ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||| Sbjct: 22 acctcgggatcatcgggccagcagcggcggcgccatggattcgtctcgcgtcatactcat 81 Query: 92 ccccggcacgccgccgctgccctacgcctacgagcagctgccctcctcctccgccgacgc 151 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 82 ccccggcacgccgccgctgccgtacgcctacgagcagctgccgtcctcctccgcggacgc 141 Query: 152 caatggccaggaggagcagcgggccggcgg---tggcctgaggtggcgcgtgtgcgccgc 208 ||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 142 caagggcatcgaggaggagcgggccggcggcggtggcctgaggtggcgcgcgtgcgccgc 201 Query: 209 cgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccgcggtcttcggggccgg 268 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 202 cgtgctggccgcctcggccgtggtggcgctcgtcgtcgccgccgcggtcttcggggccag 261 Query: 269 tgtggcgggccgtgacgtggtggccgactccgtgccggccattccggcaacggagttccc 328 | ||||||| | |||| |||||||| |||||||||||| | ||||| ||||||||||| Sbjct: 262 cggggcgggctgggacgcggtggccgcctccgtgccggcgaccccggcgacggagttccc 321 Query: 329 gaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggcctactccgccaa 388 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 322 gaggagcaggggcaaggagcacggcgtgtcggagaagacgtcgggggcctactccgccaa 381 Query: 389 cggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttcca 448 | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 382 c-gcg--ttcccgtggagcaacgccatgctgcagtggcagcgcaccggctaccatttcca 438 Query: 449 gccggac-agtactaccagaacga 471 ||||||| |||||||||||||||| Sbjct: 439 gccggacaagtactaccagaacga 462
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 573 bits (289), Expect = e-160 Identities = 328/337 (97%), Gaps = 3/337 (0%) Strand = Plus / Plus Query: 136 cctcctccgccgacgccaatggccaggaggagcagcgggccggcggtggcctgaggtggc 195 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1 cctcctccgccgacgccaatggccaggaggagcagcgggccggcg-tggcctgaggtggc 59 Query: 196 gcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccgcgg 255 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 60 acgtgtgcgccgccgtgcttgtcgcctcggccgtgctggcgctcgtcgtcgccgccgcgg 119 Query: 256 tcttcggggccggtgtggcgggccgtgacgtggtggccgactccgtgccggccattccgg 315 |||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| Sbjct: 120 tcttcggg-ccggtgtggcgggccgtgacgcggtggccggctccgtgccgtccattccgg 178 Query: 316 caacggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcggggg 375 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 cgacggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcggggg 238 Query: 376 cctactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 cctactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccg 298 Query: 436 gcttccatttccagccggac-agtactaccagaacga 471 |||||||||||||||||||| |||||||||||||||| Sbjct: 299 gcttccatttccagccggacaagtactaccagaacga 335
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 523 bits (264), Expect = e-145 Identities = 376/409 (91%), Gaps = 7/409 (1%) Strand = Plus / Plus Query: 66 atggattcctctcgcgtcattctcatccccggcacgccgccgctgccctacgcctacgag 125 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 1 atggattcgtctcgcgtcatactcatccccggcacgccgccgctgccgtacgcctacgag 60 Query: 126 cagctgccctcctcctccgccgacgccaatggccaggaggagcagcgggccggcgg---t 182 |||||||| ||||||||||| |||||||| ||| |||||| ||||||||||||| | Sbjct: 61 cagctgccgtcctcctccgcggacgccaagggcatcgaggaggagcgggccggcggcggt 120 Query: 183 ggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtc 242 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 121 ggcctgaggtggcgcgcgtgcgccgccgtgctggccgcctcggccgtggtggcgctcgtc 180 Query: 243 gtcgccgccgcggtcttcggggccggtgtggcgggccgtgacgtggtggccgactccgtg 302 |||||||||||||||||||||||| | | ||||||| | |||| |||||||| ||||||| Sbjct: 181 gtcgccgccgcggtcttcggggccagcggggcgggctgggacgcggtggccgcctccgtg 240 Query: 303 ccggccattccggcaacggagttcccgaggagcaggggcaaggagcacggcgtgtcggag 362 ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccggcgaccccggcgacggagttcccgaggagcaggggcaaggagcacggcgtgtcggag 300 Query: 363 aagacatcgggggcctactccgccaacggcggcttcccgtggagcaacgccatgctgcag 422 ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 301 aagacgtcgggggcctactccgccaac-gcg--ttcccgtggagcaacgccatgctgcag 357 Query: 423 tggcagcgcaccggcttccatttccagccggac-agtactaccagaacg 470 |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 358 tggcagcgcaccggctaccatttccagccggacaagtactaccagaacg 406
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 190 bits (96), Expect = 3e-45 Identities = 182/212 (85%), Gaps = 9/212 (4%) Strand = Plus / Plus Query: 55 ccggcggcgccatggattcctctcgcgtcattctcatccccggcacgccgccgctgccct 114 |||||||||||||||| || || |||| ||| |||||||||||||||||||||||||||| Sbjct: 74 ccggcggcgccatggagtcgtcacgcggcatcctcatccccggcacgccgccgctgccct 133 Query: 115 acgcctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcggg 174 |||| ||||||| ||||||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 134 acgcgtacgagccgctgccctcctcctccgccgacgccaacggccaggaggaccggcgga 193 Query: 175 ccggcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctgg 234 | ||| ||| |||||||||||| ||| ||||||||||| ||||||| || Sbjct: 194 tcaccggcggcgtgaggtggcgcgcgtgggccgccgtgct---------ggccgtggggg 244 Query: 235 cgctcgtcgtcgccgccgcggtcttcggggcc 266 ||||||||||||||||||||||||| |||||| Sbjct: 245 cgctcgtcgtcgccgccgcggtctttggggcc 276 Score = 141 bits (71), Expect = 2e-30 Identities = 90/95 (94%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 378 tactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 437 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tactccgccagcggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 417 Query: 438 ttccatttccagccgga-cagtactaccagaacga 471 | ||||||||||||||| || ||||||||||||| Sbjct: 418 taccatttccagccggagaagaactaccagaacga 452
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 190 bits (96), Expect = 3e-45 Identities = 123/132 (93%) Strand = Plus / Plus Query: 320 ggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggccta 379 |||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct: 255 ggagatcccgaggagcaggggcaaggacttcggcgtgtcggagaaggcgtcgggggccta 314 Query: 380 ctccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggctt 439 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 315 ctccgccgacggcgggttcccgtggagcaacgccatgctgcagtggcagcgcaccgggtt 374 Query: 440 ccatttccagcc 451 |||||||||||| Sbjct: 375 ccatttccagcc 386 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 178 gcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggc 226 |||| ||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 104 gcggcggcgtgaggtggcgcgtgtgcgctgccgtgttggccgcctcggc 152
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 172 bits (87), Expect = 7e-40 Identities = 123/135 (91%) Strand = Plus / Plus Query: 320 ggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggccta 379 |||||||||||||||| |||||||||| |||||||||||||||| | || || ||||| Sbjct: 252 ggagttcccgaggagccggggcaaggacttcggcgtgtcggagaagtcctccggtgccta 311 Query: 380 ctccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggctt 439 |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 312 ctccaccgacggcgggttcccgtggagcaacgccatgctgcagtggcagcgcaccgggtt 371 Query: 440 ccatttccagccgga 454 ||||||||||||||| Sbjct: 372 ccatttccagccgga 386 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 188 gaggtggcgcgtgtgcgccgccgtgcttgccgcctcggc 226 ||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 111 gaggtggcgcgcgtgcgccgccgtgctggccgcatcggc 149
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 167 bits (84), Expect = 4e-38 Identities = 176/208 (84%), Gaps = 9/208 (4%) Strand = Plus / Plus Query: 59 cggcgccatggattcctctcgcgtcattctcatccccggcacgccgccgctgccctacgc 118 |||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 51 cggcgccatggagtcctcacgcggcatcctcatccccggcacgccgccgctgccctacgc 110 Query: 119 ctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcgggccgg 178 ||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||| || | Sbjct: 111 gtacgagccgctgccctcctcctctgccgacgccaacggccaggaggaccggcgaaccag 170 Query: 179 cggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgct 238 ||| ||| | ||||||||| ||| ||| ||||||| ||||||| ||||||| Sbjct: 171 cggcggcgtcaggtggcgctcgtgggccaccgtgct---------ggccgtggtggcgct 221 Query: 239 cgtcgtcgccgccgcggtcttcggggcc 266 |||||||| |||||||||||| |||||| Sbjct: 222 cgtcgtcgtcgccgcggtctttggggcc 249 Score = 113 bits (57), Expect = 5e-22 Identities = 79/85 (92%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 388 acggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttcc 447 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 329 acggcggcttcccgtggagcaacgccatgctggggtggcagcgcaccggctaccatttcc 388 Query: 448 agccgga-cagtactaccagaacga 471 ||||||| || ||||||||||||| Sbjct: 389 agccggagaagaactaccagaacga 413
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 115 bits (58), Expect = 1e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 382 ccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttcc 441 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 319 ccgccgacggcggcttcccgtggagcaacgccatgctgcagtggcagcacaccgggttcc 378 Query: 442 atttccagcc 451 |||||||||| Sbjct: 379 atttccagcc 388 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 333 agcaggggcaaggagcacggcgtgtcggagaag 365 |||||||||||||| |||||||||||||||| Sbjct: 279 agcaggggcaaggattccggcgtgtcggagaag 311
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 187 tgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgt 244 |||||||||||| ||||| ||||||||| ||||| ||||||||| ||| ||| ||||| Sbjct: 153 tgaggtggcgcgcgtgcgtcgccgtgctggccgcgtcggccgtggtggtgctggtcgt 210
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 109 bits (55), Expect = 8e-21 Identities = 64/67 (95%) Strand = Plus / Plus Query: 382 ccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttcc 441 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 334 ccgccgacggcggcttcccgtggagcaacgccatgctgcagtggcagcacaccgggttcc 393 Query: 442 atttcca 448 ||||||| Sbjct: 394 atttcca 400 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 333 agcaggggcaaggagcacggcgtgtcggagaag 365 |||||||||||||| |||||||||||||||| Sbjct: 294 agcaggggcaaggattccggcgtgtcggagaag 326
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 381 ttcccgtggagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 436 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 114 tacgcctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcgg 173 ||||| ||||||| ||||||| |||||||| ||||||| ||||||| || || | ||| Sbjct: 72 tacgcgtacgagccgctgccccactcctccgacgacgcccatggccacgacgaccgccgg 131 Query: 174 gccggcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgc 217 || ||| ||| |||||||||||| |||||| ||||| ||||| Sbjct: 132 agcgccggcggcgtgaggtggcgcgcgtgcgcggccgttcttgc 175
>emb|AJ532552.1|LTE532552 Lolium temulentum partial inv1:2 gene for putative soluble acid invertase, exons 1-3 Length = 1381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 357 ttcccgtggagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 412 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 187 tgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggcc 227 |||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 121 tgaggtggcgcgcgtgcgcggccgttcttgcggcgtcggcc 161
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 452 |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 4949 ttcccgtggagcaatgccatgctgcagtggcagcgcacgggcttccacttccagccg 5005
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 343496 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 343551 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 350 cggcgtgtcggagaagacatcgggggc 376 |||||||||||||||||| |||||||| Sbjct: 343423 cggcgtgtcggagaagacgtcgggggc 343449 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 224 ggccgtgctggcgctcgtcgtcgccgccg 252 ||||||||||||||||| |||||| |||| Sbjct: 16740622 ggccgtgctggcgctcggcgtcgcggccg 16740594
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 555 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 610 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 350 cggcgtgtcggagaagacatcgggggc 376 |||||||||||||||||| |||||||| Sbjct: 482 cggcgtgtcggagaagacgtcgggggc 508
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 72280 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 72335 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 350 cggcgtgtcggagaagacatcgggggc 376 |||||||||||||||||| |||||||| Sbjct: 72207 cggcgtgtcggagaagacgtcgggggc 72233
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 441 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 496 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 350 cggcgtgtcggagaagacatcgggggc 376 |||||||||||||||||| |||||||| Sbjct: 368 cggcgtgtcggagaagacgtcgggggc 394
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 432 ttcccgtggagcaatgcgatgctccagtggcagcgcaccggcttccacttccagcc 487
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 404 gagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1 gagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 48
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 395 cttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 |||||||||||||||| ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 258 cttcccgtggagcaactccatgctgcagtggcagcgggccgggttccatttccagacgga 317
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||| || ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 352 ttcccgtggaccagcgcgatgctgcagtggcagcgcaccgggttccatttccagcc 407
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 315 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 373
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 318 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 376
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 309 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 367
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 452 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 241 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 297
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 452 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 22 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 78
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 452 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 22 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 78
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 396 ttcccgtggagcaatgccatgctccagtggcagcgcacaggctttcacttccagcc 451
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 380 ttcccgtggagcaatgccatgctccagtggcagcgcacggggttccacttccagcc 435
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||| || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 500 ttcccgtggagcaatgcgatgctccagtggcaacgcaccggcttccacttccagcc 555
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 390 ggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccag 449 ||||| |||||||||||||||| ||||||||||||||||||| |||| |||||||||| Sbjct: 243 ggcgggttcccgtggagcaacgagatgctgcagtggcagcgcagtggctaccatttccag 302 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gaggtggcgcgtgtgcgccg 207 |||||||||||||||||||| Sbjct: 128 gaggtggcgcgtgtgcgccg 147
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 390 ggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccag 449 ||||| |||||||||||||||| ||||||||||||||||||| ||| | |||||||||| Sbjct: 250 ggcgggttcccgtggagcaacgagatgctgcagtggcagcgcagcggttaccatttccag 309
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 396 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 451 |||||||||||||| || |||||||| ||||||||||| || |||||||||||||| Sbjct: 328 ttcccgtggagcaatgcgatgctgcaatggcagcgcacggggttccatttccagcc 383
>gb|AF211253.1| Agropyron cristatum sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2174 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 390 ggcggcttcccgtggagcaacgccatgctgcagtggcagcg 430 ||||| |||||||||||||||| ||||||||||||||||| Sbjct: 284 ggcgggttcccgtggagcaacgagatgctgcagtggcagcg 324 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 193 ggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccg 252 |||||||||||||||| ||||| | ||||||||| || ||| | | ||||||||||||| Sbjct: 174 ggcgcgtgtgcgccgctatgcttacggcctcggccatggtggtggtggtcgtcgccgccg 233 Query: 253 cg 254 || Sbjct: 234 cg 235
>emb|X97643.1|TGINV6GEN T.gesneriana mRNA for invertase 6 Length = 2079 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 411 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 |||||||||||||||||| | || || ||||||||||||||||| Sbjct: 256 gccatgctgcagtggcagaggactgggttccatttccagccgga 299
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 |||||||||||||||||||||||| Sbjct: 1333587 tcgtcgtcgccgccgcggtcttcg 1333610 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 gctggcgctcgtcgtcgccgcc 251 |||||||||||||||||||||| Sbjct: 446189 gctggcgctcgtcgtcgccgcc 446168 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 gctcgtcgtcgccgccgcggtcttc 260 |||||||||||| |||||||||||| Sbjct: 11365 gctcgtcgtcgcggccgcggtcttc 11341
>emb|X95651.1|TGINV11GN T.gesneriana mRNA for invertase Length = 2066 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 411 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 ||||||||| |||||||| | || || ||||||||||||||||| Sbjct: 282 gccatgctggagtggcagaggactgggttccatttccagccgga 325
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgcggtcttc 260 |||||||||||| |||||||||||||| Sbjct: 144681 gcgctcgtcgtcaccgccgcggtcttc 144655
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgcggtcttc 260 |||||||||||| |||||||||||||| Sbjct: 1540273 gcgctcgtcgtcaccgccgcggtcttc 1540247
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 tggcgggccgtgacgtggtggc 292 |||||||||||||||||||||| Sbjct: 783079 tggcgggccgtgacgtggtggc 783100
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 tggcgggccgtgacgtggtggc 292 |||||||||||||||||||||| Sbjct: 724342 tggcgggccgtgacgtggtggc 724363
>gb|AC132805.3| Homo sapiens chromosome 16 clone LA16c-356B12, complete sequence Length = 35019 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 cggcggtggcctgaggtggcgc 197 |||||||||||||||||||||| Sbjct: 32438 cggcggtggcctgaggtggcgc 32459
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 cggcggtggcctgaggtggcgc 197 |||||||||||||||||||||| Sbjct: 129348 cggcggtggcctgaggtggcgc 129327
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 cggcggtggcctgaggtggcgc 197 |||||||||||||||||||||| Sbjct: 105923 cggcggtggcctgaggtggcgc 105902
>ref|XM_465675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1585 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 ggccgtgctggcgctcgtcgtcgccgccg 252 ||||||||||||||||| |||||| |||| Sbjct: 441 ggccgtgctggcgctcggcgtcgcggccg 469
>gb|AY772006.1| Oryza sativa (japonica cultivar-group) ornithine decarboxylase (ODC1) mRNA, complete cds Length = 1527 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 ggccgtgctggcgctcgtcgtcgccgccg 252 ||||||||||||||||| |||||| |||| Sbjct: 381 ggccgtgctggcgctcggcgtcgcggccg 409
>ref|XM_757059.1| Ustilago maydis 521 hypothetical protein (UM06005.1) partial mRNA Length = 9528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgcca 153 ||||||||||||||||||||| Sbjct: 1852 cctcctcctccgccgacgcca 1872
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 gccggcggtggcctgaggtggcgcg 198 |||||||||||||||||| |||||| Sbjct: 619049 gccggcggtggcctgaggcggcgcg 619025
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cccggcacgccgccgctgccc 113 ||||||||||||||||||||| Sbjct: 62374 cccggcacgccgccgctgccc 62394
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 224 ggccgtgctggcgctcgtcgtcgccgccg 252 ||||||||||||||||| |||||| |||| Sbjct: 117677 ggccgtgctggcgctcggcgtcgcggccg 117649
>dbj|AK107159.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E11, full insert sequence Length = 1585 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 ggccgtgctggcgctcgtcgtcgccgccg 252 ||||||||||||||||| |||||| |||| Sbjct: 441 ggccgtgctggcgctcggcgtcgcggccg 469
>gb|AY105724.1| Zea mays PCO149105 mRNA sequence Length = 1357 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 gcgccgccgtgcttgccgcct 222 ||||||||||||||||||||| Sbjct: 931 gcgccgccgtgcttgccgcct 911
>gb|AF016633.1|AF016633 Glycine max GH1 protein (GH1) mRNA, partial cds Length = 1108 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cagtggcagcgcaccggcttc 440 ||||||||||||||||||||| Sbjct: 523 cagtggcagcgcaccggcttc 543
>ref|XM_480995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 tcgtcgtcgccgccgcggtc 257 |||||||||||||||||||| Sbjct: 49 tcgtcgtcgccgccgcggtc 68
>ref|NM_185070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1798 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 513 gcgctcgtcgtcgccgccgc 494
>ref|NM_192515.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgccaatg 156 ||||||||||||||| |||||||| Sbjct: 2098 cctcctcctccgccgccgccaatg 2121
>ref|XM_479391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 635 tcgtcgtcgccgccgtggtcttcg 612
>ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1435 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 131 gcgctcgtcgtcgccgccgc 112
>ref|XM_473543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 152 cctcctcctccgccgacgcc 133
>gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence Length = 1402 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gcgccgccgtgcttgccgcc 221 |||||||||||||||||||| Sbjct: 844 gcgccgccgtgcttgccgcc 825
>gb|AY023466.1| Oryza sativa microsatellite MRG5791 containing (TCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 161 tcgtcgtcgccgccgtggtcttcg 184
>gb|AY023325.1| Oryza sativa microsatellite MRG5650 containing (GTC)X11, genomic sequence Length = 233 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 201 tcgtcgtcgccgccgtggtcttcg 224
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 9074 cctcctcctccgccgacgcc 9093
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 109762 cctcctcctccgccgacgcc 109781
>gb|AY644643.1| Oryza sativa (indica cultivar-group) hypothetical protein (RP2) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 663 tcgtcgtcgccgccgtggtcttcg 640
>gb|AY658960.1| Synthetic construct Peudomonas aeruginosa clone FLH042563.01F PA2115 gene, partial cds Length = 954 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ggcttccatttccagccgga 454 |||||||||||||||||||| Sbjct: 87 ggcttccatttccagccgga 106
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cgccgccgtgcttgccgcct 222 |||||||||||||||||||| Sbjct: 1740159 cgccgccgtgcttgccgcct 1740178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 32887342 gcgctcgtcgtcgccgccgc 32887361
>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctgccctcctcctccgccgacgcc 152 |||||||||| ||||||||||||| Sbjct: 349 ctgccctccttctccgccgacgcc 372
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cgcctcggccgtgctggcgc 237 |||||||||||||||||||| Sbjct: 2606919 cgcctcggccgtgctggcgc 2606938
>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238669 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gagttcccgaggagcagggg 340 |||||||||||||||||||| Sbjct: 184939 gagttcccgaggagcagggg 184958
>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence Length = 1614 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctgccctcctcctccgccgacgcc 152 |||||||||| ||||||||||||| Sbjct: 348 ctgccctccttctccgccgacgcc 371
>ref|XM_971345.1| PREDICTED: Tribolium castaneum hypothetical protein LOC662904 (LOC662904), mRNA Length = 1779 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgccaatg 156 ||||||||||||||| |||||||| Sbjct: 500 cctcctcctccgccgccgccaatg 477
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 47859 cctcctcctccgccgacgcc 47840
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 catccccggcacgccgccgc 108 |||||||||||||||||||| Sbjct: 92416 catccccggcacgccgccgc 92435
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ccgcctcggccgtgctggcg 236 |||||||||||||||||||| Sbjct: 203433 ccgcctcggccgtgctggcg 203452
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 102833 gcgctcgtcgtcgccgccgc 102814
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 70686 cctcctcctccgccgacgcc 70705
>emb|AJ311165.1|BJA311165 Bradyrhizobium japonicum hemN2 gene (partial), ORF236, ORF403, ORF319, ORF206, ORF560, hmuV gene, hmuU gene, hmuT gene, hmuT gene, hmuR gene, ORF110, ORF167, exbB gene, exbD gene, tonB gene and ORF69 (partial) Length = 16607 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 ctggcgctcgtcgtcgccgccgcg 254 |||||||| ||||||||||||||| Sbjct: 3019 ctggcgctggtcgtcgccgccgcg 3042
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tggccgactccgtgccggcc 308 |||||||||||||||||||| Sbjct: 3090357 tggccgactccgtgccggcc 3090376
>gb|AC023590.8| Homo sapiens chromosome 8, clone RP11-655M22, complete sequence Length = 175582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 caccggcttccatttccagc 450 |||||||||||||||||||| Sbjct: 55312 caccggcttccatttccagc 55331
>gb|AC159018.3| Pan troglodytes BAC clone CH251-533F3 from chromosome unknown, complete sequence Length = 179366 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 caccggcttccatttccagc 450 |||||||||||||||||||| Sbjct: 80030 caccggcttccatttccagc 80049
>gb|AF395819.1|AF395819 Oryza sativa transcription activator REB (Reb) gene, complete cds Length = 6227 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 1494 gcgctcgtcgtcgccgccgc 1475
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgccgtgcttgccgcctcg 224 |||||||||||||||||||| Sbjct: 4136514 ccgccgtgcttgccgcctcg 4136495
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctcgtcgtcgccgccgcggt 256 |||||||||||||||||||| Sbjct: 646534 ctcgtcgtcgccgccgcggt 646515
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 28579896 cctcctcctccgccgacgcc 28579915
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 26994571 cctcctcctccgccgacgcc 26994552 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 7707193 cctcctcctccgccgacgcc 7707174
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tggcgctcgtcgtcgccgcc 251 |||||||||||||||||||| Sbjct: 22596226 tggcgctcgtcgtcgccgcc 22596245
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtc 257 |||||||||||||||||||| Sbjct: 9130354 tcgtcgtcgccgccgcggtc 9130335
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 27524445 tcgtcgtcgccgccgtggtcttcg 27524422 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 2826417 gcgctcgtcgtcgccgccgc 2826398
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 5082326 cctcctcctccgccgacgcc 5082307
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 32977852 gcgctcgtcgtcgccgccgc 32977871
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgccaatg 156 ||||||||||||||| |||||||| Sbjct: 22674338 cctcctcctccgccgccgccaatg 22674361
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggccgtgctggcgctcgtcg 243 |||||||||||||||||||| Sbjct: 5224100 ggccgtgctggcgctcgtcg 5224081
>gb|AE004639.1| Pseudomonas aeruginosa PAO1, section 200 of 529 of the complete genome Length = 10010 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ggcttccatttccagccgga 454 |||||||||||||||||||| Sbjct: 244 ggcttccatttccagccgga 263
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtcttcg 261 ||||||||||||||| |||||||| Sbjct: 88416 tcgtcgtcgccgccgtggtcttcg 88393
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtc 257 |||||||||||||||||||| Sbjct: 140664 tcgtcgtcgccgccgcggtc 140645
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 41364 cctcctcctccgccgacgcc 41345
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 ctggcgctcgtcgtcgccgccgcg 254 |||||||| ||||||||||||||| Sbjct: 7801259 ctggcgctggtcgtcgccgccgcg 7801236
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 cgcaccggcttccatttcca 448 |||||||||||||||||||| Sbjct: 4180576 cgcaccggcttccatttcca 4180595
>dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1130E07 Length = 152245 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tggcgctcgtcgtcgccgcc 251 |||||||||||||||||||| Sbjct: 38146 tggcgctcgtcgtcgccgcc 38165
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgccaatg 156 ||||||||||||||| |||||||| Sbjct: 51050 cctcctcctccgccgccgccaatg 51073
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tggcgctcgtcgtcgccgcc 251 |||||||||||||||||||| Sbjct: 111427 tggcgctcgtcgtcgccgcc 111446
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 124440 cctcctcctccgccgacgcc 124421
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 129978 gcgctcgtcgtcgccgccgc 129959
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tcgtcgtcgccgccgcggtc 257 |||||||||||||||||||| Sbjct: 65848 tcgtcgtcgccgccgcggtc 65829
>dbj|AK112099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E06, full insert sequence Length = 3089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 289 cctcctcctccgccgacgcc 270
>dbj|AK111914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128F17, full insert sequence Length = 3052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 272 cctcctcctccgccgacgcc 253
>emb|X97642.1|TGINV5GEN T.gesneriana mRNA for invertase 5 Length = 2121 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 411 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 454 ||||||||||| |||||| | || || |||||||||||| |||| Sbjct: 282 gccatgctgcaatggcagaggactgggttccatttccagacgga 325
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase Length = 1565 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctgccctcctcctccgccgacgcc 152 |||||||||| ||||||||||||| Sbjct: 333 ctgccctccttctccgccgacgcc 356
>dbj|AK109126.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D05, full insert sequence Length = 851 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcctcctccgccgacgccaatg 156 ||||||||||||||| |||||||| Sbjct: 460 cctcctcctccgccgccgccaatg 483
>dbj|AK107635.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-E08, full insert sequence Length = 1971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tggcgctcgtcgtcgccgcc 251 |||||||||||||||||||| Sbjct: 431 tggcgctcgtcgtcgccgcc 450
>dbj|AK068589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H07, full insert sequence Length = 1720 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 524 gcgctcgtcgtcgccgccgc 505
>dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D18, full insert sequence Length = 1435 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 131 gcgctcgtcgtcgccgccgc 112
>dbj|AB101647.1| Oryza sativa (japonica cultivar-group) Roc4 mRNA for GL2-type homeodomain protein, complete cds Length = 2957 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 152 cctcctcctccgccgacgcc 133
>dbj|AB021736.1| Oryza sativa (indica cultivar-group) gene for bZIP protein, complete cds Length = 5651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 1984 gcgctcgtcgtcgccgccgc 1965
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 27321624 cctcctcctccgccgacgcc 27321605 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccgccgacgcc 152 |||||||||||||||||||| Sbjct: 7777280 cctcctcctccgccgacgcc 7777261
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tgctggcgctcgtcgtcgccgccg 252 ||||||||||| |||||||||||| Sbjct: 457459 tgctggcgctcctcgtcgccgccg 457482
>dbj|D78609.1|RICBZIPPA Oryza sativa (japonica cultivar-group) mRNA for bZIP protein, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcgctcgtcgtcgccgccgc 253 |||||||||||||||||||| Sbjct: 489 gcgctcgtcgtcgccgccgc 470
>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2 Length = 150409 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 caccggcttccatttccagc 450 |||||||||||||||||||| Sbjct: 5562 caccggcttccatttccagc 5543 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,269,871 Number of Sequences: 3902068 Number of extensions: 4269871 Number of successful extensions: 94684 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90977 Number of HSP's gapped (non-prelim): 3697 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
