ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (... 139 7e-30
2gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
3gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
5dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRN... 133 4e-28
6dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
7gb|AY106346.1| Zea mays PCO069392 mRNA sequence 119 6e-24
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRN... 111 2e-21
10dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
11dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
12emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 48 0.019
13dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, who... 46 0.077
14ref|XM_481158.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
15ref|NM_001031327.1| Gallus gallus Ras-like without CAAX 1 (RIT1)... 44 0.30
16ref|XM_863753.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.30
17ref|XM_993810.1| PREDICTED: Mus musculus hypothetical protein LO... 44 0.30
18emb|AJ720009.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.30
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
20dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
21dbj|AK062738.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
22gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, comple... 44 0.30
23ref|XM_363086.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.2
24ref|NM_021134.2| Homo sapiens mitochondrial ribosomal protein L2... 42 1.2
25gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, c... 42 1.2
26gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, com... 42 1.2
27gb|AY575969.1| Rhodococcus sp. T104 putative serine-threonine pr... 42 1.2
28gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.2
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.2
31dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
32dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
33gb|BC027710.2| Homo sapiens mitochondrial ribosomal protein L23,... 42 1.2
34gb|AC004556.1|AC004556 Homo sapiens Chromosome 11p15.5 PAC pDJ99... 42 1.2
35gb|U26596.1|HSU26596 Human ribosomal protein L23-related mRNA, c... 42 1.2
36gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.2
37emb|Z49254.1|HSL23REL H.sapiens L23-related mRNA 42 1.2
38ref|XM_481404.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.7
39ref|XM_475768.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
40gb|DQ217305.1| Taeniopygia guttata clone 0058P0033G10 mRNA sequence 40 4.7
41gb|DQ215405.1| Taeniopygia guttata clone 0063P0030B12 NADH-ubiqu... 40 4.7
42gb|DQ215404.1| Taeniopygia guttata clone 0058P0025B08 NADH-ubiqu... 40 4.7
43gb|DQ215403.1| Taeniopygia guttata clone 0061P0027E09 NADH-ubiqu... 40 4.7
44gb|DQ215402.1| Taeniopygia guttata clone 0058P0045C04 NADH-ubiqu... 40 4.7
45gb|DQ215401.1| Taeniopygia guttata clone 0058P0055F12 NADH-ubiqu... 40 4.7
46gb|DQ215400.1| Taeniopygia guttata clone 0061P0005B01 NADH-ubiqu... 40 4.7
47ref|XM_519337.1| PREDICTED: Pan troglodytes similar to zinc fing... 40 4.7
48gb|AY775254.1| Smilax hugeri voucher GH8675 internal transcribed... 40 4.7
49gb|AY775253.1| Smilax pulverulenta voucher GH4460 internal trans... 40 4.7
50gb|AY775251.1| Smilax lasioneura voucher NY94 internal transcrib... 40 4.7
51gb|AY775250.1| Smilax herbacea voucher Fu99810 internal transcri... 40 4.7
52gb|AY775249.1| Smilax herbacea voucher NYKC111 internal transcri... 40 4.7
53gb|AY775248.1| Smilax herbacea voucher Kew159 internal transcrib... 40 4.7
54gb|AY775247.1| Smilax herbacea voucher NYKC9967 internal transcr... 40 4.7
55gb|AY775236.1| Smilax riparia voucher Fu99902 internal transcrib... 40 4.7
56gb|AY775235.1| Smilax riparia voucher Kim0529 internal transcrib... 40 4.7
57gb|AY726588.1| Homo sapiens clone MO-09 mRNA sequence 40 4.7
58gb|BT016567.1| Zea mays clone Contig400 mRNA sequence 40 4.7
59gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
60gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 4.7
61gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 4.7
62gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
63gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, compl... 40 4.7
64gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 4.7
65ref|XM_001000418.1| PREDICTED: Mus musculus hypothetical protein... 40 4.7
66gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 4.7
67gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, comple... 40 4.7
68emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on ch... 40 4.7
69emb|Z48540.2|PAATSAGN Pseudomonas aeruginosa atsR, atsB, atsC & ... 40 4.7
70emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.7
71emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.7
72emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.7
73emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 4.7
74dbj|AK057037.1| Homo sapiens cDNA FLJ32475 fis, clone SKNMC2000612 40 4.7
75gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 40 4.7
76ref|XM_938047.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 4.7
77ref|XM_377828.3| PREDICTED: Homo sapiens hypothetical LOC402160 ... 40 4.7
78ref|NM_001024613.1| Homo sapiens zinc finger protein 312-like (L... 40 4.7
79dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
80gb|AF521897.1| Streptomyces hygroscopicus ansamycin biosynthesis... 40 4.7
81dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.7
82gb|AE004456.1| Pseudomonas aeruginosa PAO1, section 17 of 529 of... 40 4.7
83dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 4.7
84dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
85dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
86dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
87dbj|AK064148.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
88dbj|AK062545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
89dbj|AK061590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
90gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 4.7
91emb|Z68284.1|HSL95E6 Human DNA sequence from clone LA04NC01-95E6... 40 4.7
92gb|M61119.1|SERFDXA Saccharopolyspora erythraea ferredoxin (fdxA... 40 4.7
93dbj|AB019326.1| Nolana villosa DNA, internal transcribed spacer 1 40 4.7
94dbj|AB019314.1| Nolana mollis DNA, internal transcribed spacer 1 40 4.7 
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA,
           complete cds
          Length = 1380

 Score =  139 bits (70), Expect = 7e-30
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                       
Query: 223 cgctacgccgcggccgagcaccgcccgctcttcgccctcgtcggcatgctcttcgccgcc 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgctacgccgcggccgagcaccgcccgctcttcgccctcgtcggcatgctcttcgccgcc 60

                     
Query: 283 gccgtcttct 292
           ||||||||||
Sbjct: 61  gccgtcttct 70
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>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
              complete sequence
          Length = 164064

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                          
Query: 190    tccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccg 249
              |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 147254 tccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccg 147195

                                                         
Query: 250    ctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
              ||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 147194 ctcttcgccctcgccgggatgctcgtcgccgctgccatcttct 147152



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 93     gatggcgtcggagctcacgtaccgcggcgg 122
              ||||||||||||||| || |||||||||||
Sbjct: 147351 gatggcgtcggagctgacctaccgcggcgg 147322
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>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10,
           complete sequence
          Length = 159672

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                       
Query: 190 tccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccg 249
           |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 431 tccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccg 372

                                                      
Query: 250 ctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
           ||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 371 ctcttcgccctcgccgggatgctcgtcgccgctgccatcttct 329



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 93  gatggcgtcggagctcacgtaccgcggcgg 122
           ||||||||||||||| || |||||||||||
Sbjct: 528 gatggcgtcggagctgacctaccgcggcgg 499
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                            
Query: 190      tccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccg 249
                |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 17203119 tccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccg 17203060

                                                           
Query: 250      ctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
                ||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 17203059 ctcttcgccctcgccgggatgctcgtcgccgctgccatcttct 17203017



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 93       gatggcgtcggagctcacgtaccgcggcgg 122
                ||||||||||||||| || |||||||||||
Sbjct: 17203216 gatggcgtcggagctgacctaccgcggcgg 17203187



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      cgccgccggggccgccggcg 163
                ||||||||||||||||||||
Sbjct: 26400259 cgccgccggggccgccggcg 26400240
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>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for
           UDP-glucuronic acid decarboxylase, complete cds
          Length = 1555

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                       
Query: 190 tccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccg 249
           |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 180 tccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccg 239

                                                      
Query: 250 ctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
           ||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 240 ctcttcgccctcgccgggatgctcgtcgccgctgccatcttct 282



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 93  gatggcgtcggagctcacgtaccgcggcgg 122
           ||||||||||||||| || |||||||||||
Sbjct: 83  gatggcgtcggagctgacctaccgcggcgg 112
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>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full
           insert sequence
          Length = 1734

 Score =  133 bits (67), Expect = 4e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                       
Query: 190 tccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccg 249
           |||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 254 tccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccg 313

                                                      
Query: 250 ctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
           ||||||||||||| ||| |||||| ||||||| ||| ||||||
Sbjct: 314 ctcttcgccctcgccgggatgctcgtcgccgctgccatcttct 356



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 93  gatggcgtcggagctcacgtaccgcggcgg 122
           ||||||||||||||| || |||||||||||
Sbjct: 157 gatggcgtcggagctgacctaccgcggcgg 186
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>gb|AY106346.1| Zea mays PCO069392 mRNA sequence
          Length = 1708

 Score =  119 bits (60), Expect = 6e-24
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                       
Query: 193 aagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgcccgctc 252
           |||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||
Sbjct: 167 aagccgcttgcgtggctgccccgcgcggcccgctacgccgtcgccgagaaccgcccgctc 226

                                               
Query: 253 ttcgccctcgtcggcatgctcttcgccgccgccgtc 288
           ||||| |||| ||| |||||| ||||||||||||||
Sbjct: 227 ttcgcgctcgccgggatgctcatcgccgccgccgtc 262



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 93  gatggcgtcggagctcacgtaccgcggcgg 122
           ||||||||| |||||||| |||||||||||
Sbjct: 82  gatggcgtccgagctcacctaccgcggcgg 111
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 189      ctccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgccc 248
                ||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||||
Sbjct: 11893565 ctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccc 11893506

                                                            
Query: 249      gctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
                   ||||||||||| ||| |||||| ||||||||||| ||||||
Sbjct: 11893505 cgccttcgccctcgccgggatgctcctcgccgccgccctcttct 11893462



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 93       gatggcgtcggagctcacgtaccgcggcggggcgg 127
                |||||||||||||||||||||||||||||| ||||
Sbjct: 11893646 gatggcgtcggagctcacgtaccgcggcggcgcgg 11893612
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>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for
           UDP-glucuronic acid decarboxylase, complete cds
          Length = 1336

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                       
Query: 189 ctccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgccc 248
           ||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||||
Sbjct: 104 ctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccc 163

                                                       
Query: 249 gctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
              ||||||||||| ||| |||||| ||||||||||| ||||||
Sbjct: 164 cgccttcgccctcgccgggatgctcctcgccgccgccctcttct 207



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 93  gatggcgtcggagctcacgtaccgcggcggggcgg 127
           |||||||||||||||||||||||||||||| ||||
Sbjct: 23  gatggcgtcggagctcacgtaccgcggcggcgcgg 57
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>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1012D10
          Length = 168267

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                          
Query: 189    ctccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgccc 248
              ||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||||
Sbjct: 105850 ctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccc 105791

                                                          
Query: 249    gctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
                 ||||||||||| ||| |||||| ||||||||||| ||||||
Sbjct: 105790 cgccttcgccctcgccgggatgctcctcgccgccgccctcttct 105747



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 93     gatggcgtcggagctcacgtaccgcggcggggcgg 127
              |||||||||||||||||||||||||||||| ||||
Sbjct: 105931 gatggcgtcggagctcacgtaccgcggcggcgcgg 105897
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>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full
           insert sequence
          Length = 1820

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                       
Query: 189 ctccaagccgctcgcgtggctgccccgcgccgcccgctacgccgcggccgagcaccgccc 248
           ||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||||
Sbjct: 231 ctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccc 290

                                                       
Query: 249 gctcttcgccctcgtcggcatgctcttcgccgccgccgtcttct 292
              ||||||||||| ||| |||||| ||||||||||| ||||||
Sbjct: 291 cgccttcgccctcgccgggatgctcctcgccgccgccctcttct 334



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 93  gatggcgtcggagctcacgtaccgcggcggggcgg 127
           |||||||||||||||||||||||||||||| ||||
Sbjct: 150 gatggcgtcggagctcacgtaccgcggcggcgcgg 184
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 264   cggcatgctcttcgccgccgccgtcttc 291
             ||||||| ||||||||||||||||||||
Sbjct: 11816 cggcatggtcttcgccgccgccgtcttc 11789
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>dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, whole sequence
          Length = 45519

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 269  tgctcttcgccgccgccgtcttc 291
            |||||||||||||||||||||||
Sbjct: 8226 tgctcttcgccgccgccgtcttc 8204
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>ref|XM_481158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 635

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 138 cgcgggcgccgccggggccgccggcg 163
           |||||||||||||| |||||||||||
Sbjct: 270 cgcgggcgccgccgcggccgccggcg 295
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>ref|NM_001031327.1| Gallus gallus Ras-like without CAAX 1 (RIT1), mRNA
          Length = 3073

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 199 ctcgcgtggctgccccgcgccgcccg 224
           |||||| |||||||||||||||||||
Sbjct: 172 ctcgcggggctgccccgcgccgcccg 147
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>ref|XM_863753.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9464.2), mRNA
          Length = 711

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 137 ccgcgggcgccgccggggccgc 158
           ||||||||||||||||||||||
Sbjct: 199 ccgcgggcgccgccggggccgc 220
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>ref|XM_993810.1| PREDICTED: Mus musculus hypothetical protein LOC668012 (LOC668012),
           mRNA
          Length = 465

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 205 tggctgccccgcgccgcccgct 226
           ||||||||||||||||||||||
Sbjct: 268 tggctgccccgcgccgcccgct 289
to top
>emb|AJ720009.1| Gallus gallus mRNA for hypothetical protein, clone 9f23
          Length = 3073

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 199 ctcgcgtggctgccccgcgccgcccg 224
           |||||| |||||||||||||||||||
Sbjct: 172 ctcgcggggctgccccgcgccgcccg 147
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 138      cgcgggcgccgccggggccgccggcg 163
                |||||||||||||| |||||||||||
Sbjct: 10281080 cgcgggcgccgccgcggccgccggcg 10281055



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      tcttcgccgccgccgtcttc 291
                ||||||||||||||||||||
Sbjct: 12258876 tcttcgccgccgccgtcttc 12258857
to top
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1540_G08
          Length = 126263

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 138   cgcgggcgccgccggggccgccggcg 163
             |||||||||||||| |||||||||||
Sbjct: 87103 cgcgggcgccgccgcggccgccggcg 87078
to top
>dbj|AK062738.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-E12, full
           insert sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 138 cgcgggcgccgccggggccgccggcg 163
           |||||||||||||| |||||||||||
Sbjct: 270 cgcgggcgccgccgcggccgccggcg 295
to top
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence
          Length = 204800

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    tggctgccccgcgccgcccgct 226
              ||||||||||||||||||||||
Sbjct: 132510 tggctgccccgcgccgcccgct 132531
to top
>ref|XM_363086.1| Magnaporthe grisea 70-15 hypothetical protein (MG08670.4) partial
           cds
          Length = 1539

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 141 gggcgccgccggggccgccgg 161
           |||||||||||||||||||||
Sbjct: 991 gggcgccgccggggccgccgg 971
to top
>ref|NM_021134.2| Homo sapiens mitochondrial ribosomal protein L23 (MRPL23), nuclear
           gene encoding mitochondrial protein, mRNA
          Length = 701

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 ccgcggcggggcggcgtcccc 134
           |||||||||||||||||||||
Sbjct: 479 ccgcggcggggcggcgtcccc 499
to top
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence
          Length = 188519

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   ccgcggcggggcggcgtcccc 134
             |||||||||||||||||||||
Sbjct: 41635 ccgcggcggggcggcgtcccc 41615
to top
>gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, complete sequence
          Length = 137691

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    ccgcggcggggcggcgtcccc 134
              |||||||||||||||||||||
Sbjct: 126109 ccgcggcggggcggcgtcccc 126089
to top
>gb|AY575969.1| Rhodococcus sp. T104 putative serine-threonine protein kinase, indole
            oxygenase, putative TetR-family transcriptional
            regulator, and flavin reductase-like protein genes,
            complete cds
          Length = 8842

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  ccgccggcgagtacccgtccg 175
            |||||||||||||||||||||
Sbjct: 5387 ccgccggcgagtacccgtccg 5367
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 139     gcgggcgccgccggggccgccggcg 163
               |||||||||||||| ||||||||||
Sbjct: 2284941 gcgggcgccgccggagccgccggcg 2284965
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 266      gcatgctcttcgccgccgccg 286
                |||||||||||||||||||||
Sbjct: 31333307 gcatgctcttcgccgccgccg 31333327
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 138     cgcgggcgccgccggggccgccggc 162
               |||||||||||| ||||||||||||
Sbjct: 5012316 cgcgggcgccgcgggggccgccggc 5012340



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cgcgggcgccgccggggccg 157
               ||||||||||||||||||||
Sbjct: 4007469 cgcgggcgccgccggggccg 4007450
to top
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0024K03
          Length = 119796

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   gcatgctcttcgccgccgccg 286
             |||||||||||||||||||||
Sbjct: 15881 gcatgctcttcgccgccgccg 15901
to top
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1118_G04
          Length = 134464

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    gcatgctcttcgccgccgccg 286
              |||||||||||||||||||||
Sbjct: 103175 gcatgctcttcgccgccgccg 103195
to top
>gb|BC027710.2| Homo sapiens mitochondrial ribosomal protein L23, mRNA (cDNA clone
           MGC:12795 IMAGE:4298000), complete cds
          Length = 663

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 ccgcggcggggcggcgtcccc 134
           |||||||||||||||||||||
Sbjct: 430 ccgcggcggggcggcgtcccc 450
to top
>gb|AC004556.1|AC004556 Homo sapiens Chromosome 11p15.5 PAC pDJ998n23 containing H19 gene,
             complete sequence
          Length = 100316

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ccgcggcggggcggcgtcccc 134
             |||||||||||||||||||||
Sbjct: 11577 ccgcggcggggcggcgtcccc 11597
to top
>gb|U26596.1|HSU26596 Human ribosomal protein L23-related mRNA, complete cds
          Length = 700

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 ccgcggcggggcggcgtcccc 134
           |||||||||||||||||||||
Sbjct: 478 ccgcggcggggcggcgtcccc 498
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    cgccgccggggccgccggcga 164
              |||||||||||||||||||||
Sbjct: 677509 cgccgccggggccgccggcga 677489
to top
>emb|Z49254.1|HSL23REL H.sapiens L23-related mRNA
          Length = 700

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 ccgcggcggggcggcgtcccc 134
           |||||||||||||||||||||
Sbjct: 478 ccgcggcggggcggcgtcccc 498
to top
>ref|XM_481404.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 tcttcgccgccgccgtcttc 291
           ||||||||||||||||||||
Sbjct: 211 tcttcgccgccgccgtcttc 192
to top
>ref|XM_475768.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 243

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cgccgccggggccgccggcg 163
           ||||||||||||||||||||
Sbjct: 51  cgccgccggggccgccggcg 70
to top
>gb|DQ217305.1| Taeniopygia guttata clone 0058P0033G10 mRNA sequence
          Length = 604

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 114 ccgcgggcgccgccgtggccgccg 91
to top
>gb|DQ215405.1| Taeniopygia guttata clone 0063P0030B12 NADH-ubiquinone
           oxidoreductase variant 2-like mRNA, complete sequence
          Length = 1273

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 82  ccgcgggcgccgccgtggccgccg 59
to top
>gb|DQ215404.1| Taeniopygia guttata clone 0058P0025B08 NADH-ubiquinone
           oxidoreductase variant 1-like mRNA, complete sequence
          Length = 574

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 77  ccgcgggcgccgccgtggccgccg 54
to top
>gb|DQ215403.1| Taeniopygia guttata clone 0061P0027E09 NADH-ubiquinone
           oxidoreductase variant 1-like mRNA, complete sequence
          Length = 562

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 84  ccgcgggcgccgccgtggccgccg 61
to top
>gb|DQ215402.1| Taeniopygia guttata clone 0058P0045C04 NADH-ubiquinone
           oxidoreductase variant 1-like mRNA, complete sequence
          Length = 561

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 82  ccgcgggcgccgccgtggccgccg 59
to top
>gb|DQ215401.1| Taeniopygia guttata clone 0058P0055F12 NADH-ubiquinone
           oxidoreductase variant 1-like mRNA, complete sequence
          Length = 560

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 82  ccgcgggcgccgccgtggccgccg 59
to top
>gb|DQ215400.1| Taeniopygia guttata clone 0061P0005B01 NADH-ubiquinone
           oxidoreductase variant 1-like mRNA, complete sequence
          Length = 431

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||||| ||||||||
Sbjct: 82  ccgcgggcgccgccgtggccgccg 59
to top
>ref|XM_519337.1| PREDICTED: Pan troglodytes similar to zinc finger protein 312;
           forebrain embryonic zinc finger (LOC463682), mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 ccgcgggcgccgccggggcc 156
           ||||||||||||||||||||
Sbjct: 322 ccgcgggcgccgccggggcc 303
to top
>gb|AY775254.1| Smilax hugeri voucher GH8675 internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 172 cgcggcggggcggcgtcccc 191
to top
>gb|AY775253.1| Smilax pulverulenta voucher GH4460 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 820

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 173 cgcggcggggcggcgtcccc 192
to top
>gb|AY775251.1| Smilax lasioneura voucher NY94 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 829

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 173 cgcggcggggcggcgtcccc 192
to top
>gb|AY775250.1| Smilax herbacea voucher Fu99810 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 173 cgcggcggggcggcgtcccc 192
to top
>gb|AY775249.1| Smilax herbacea voucher NYKC111 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 173 cgcggcggggcggcgtcccc 192
to top
>gb|AY775248.1| Smilax herbacea voucher Kew159 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 176 cgcggcggggcggcgtcccc 195
to top
>gb|AY775247.1| Smilax herbacea voucher NYKC9967 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 173 cgcggcggggcggcgtcccc 192
to top
>gb|AY775236.1| Smilax riparia voucher Fu99902 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 850

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 199 cgcggcggggcggcgtcccc 218
to top
>gb|AY775235.1| Smilax riparia voucher Kim0529 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 850

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcggggcggcgtcccc 134
           ||||||||||||||||||||
Sbjct: 199 cgcggcggggcggcgtcccc 218
to top
>gb|AY726588.1| Homo sapiens clone MO-09 mRNA sequence
          Length = 2026

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 ccgcgggcgccgccggggcc 156
           ||||||||||||||||||||
Sbjct: 317 ccgcgggcgccgccggggcc 298
to top
>gb|BT016567.1| Zea mays clone Contig400 mRNA sequence
          Length = 905

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ccgcgggcgccgccggggccgccg 160
           ||||||||||||| ||||||||||
Sbjct: 121 ccgcgggcgccgcgggggccgccg 98
to top
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
              complete sequence
          Length = 158749

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    tcttcgccgccgccgtcttc 291
              ||||||||||||||||||||
Sbjct: 134955 tcttcgccgccgccgtcttc 134974
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 137     ccgcgggcgccgccggggccgccggcga 164
               |||| ||||||||||| |||||||||||
Sbjct: 4086528 ccgccggcgccgccggcgccgccggcga 4086501
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gcggcggggcggcgtccccg 135
              ||||||||||||||||||||
Sbjct: 847080 gcggcggggcggcgtccccg 847061
to top
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   cgccgccggggccgccggcg 163
             ||||||||||||||||||||
Sbjct: 44950 cgccgccggggccgccggcg 44931
to top
>gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ccgcgggcgccgccggggcc 156
             ||||||||||||||||||||
Sbjct: 10742 ccgcgggcgccgccggggcc 10761
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     gccaagccggccagctccaa 194
               ||||||||||||||||||||
Sbjct: 5175356 gccaagccggccagctccaa 5175375
to top
>ref|XM_001000418.1| PREDICTED: Mus musculus hypothetical protein LOC672680 (LOC672680),
           mRNA
          Length = 465

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 203 cgtggctgccccgcgccgcccgct 226
           ||||| ||||||||||||||||||
Sbjct: 266 cgtgggtgccccgcgccgcccgct 289
to top
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   ccgcgggcgccgccggggccgccg 160
             |||||| |||||||||||||||||
Sbjct: 59698 ccgcggtcgccgccggggccgccg 59675
to top
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    ccgcgggcgccgccggggcc 156
              ||||||||||||||||||||
Sbjct: 140460 ccgcgggcgccgccggggcc 140479
to top
>emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on chromosome 4, complete
             sequence
          Length = 168683

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   gggcgccgccggggccgccg 160
             ||||||||||||||||||||
Sbjct: 54206 gggcgccgccggggccgccg 54225
to top
>emb|Z48540.2|PAATSAGN Pseudomonas aeruginosa atsR, atsB, atsC & atsA genes
          Length = 6315

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gcgaggtccagccctgcgcc 55
            ||||||||||||||||||||
Sbjct: 2205 gcgaggtccagccctgcgcc 2186
to top
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 137    ccgcgggcgccgccggggccgccggcga 164
              |||| ||||||||||| |||||||||||
Sbjct: 277110 ccgccggcgccgccggcgccgccggcga 277083
to top
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggtccagccctgcgcctcat 59
             ||||||||||||||||||||
Sbjct: 72564 ggtccagccctgcgcctcat 72583
to top
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 137    ccgcgggcgccgccggggccgccggcga 164
              |||| ||||||||||| |||||||||||
Sbjct: 280523 ccgccggcgccgccggcgccgccggcga 280496
to top
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    ccgcgggcgccgccggggccgccg 160
              |||||| |||||||||||||||||
Sbjct: 193532 ccgcggccgccgccggggccgccg 193509
to top
>dbj|AK057037.1| Homo sapiens cDNA FLJ32475 fis, clone SKNMC2000612
          Length = 2641

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 ccgcgggcgccgccggggcc 156
           ||||||||||||||||||||
Sbjct: 459 ccgcgggcgccgccggggcc 478
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>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cattctcacacggggggccc 76
             ||||||||||||||||||||
Sbjct: 93809 cattctcacacggggggccc 93790
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>ref|XM_938047.1| PREDICTED: Homo sapiens hypothetical protein LOC648970 (LOC648970),
            mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  gggcgccgccggggccgccg 160
            ||||||||||||||||||||
Sbjct: 1110 gggcgccgccggggccgccg 1091
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>ref|XM_377828.3| PREDICTED: Homo sapiens hypothetical LOC402160 (LOC402160), mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  gggcgccgccggggccgccg 160
            ||||||||||||||||||||
Sbjct: 1110 gggcgccgccggggccgccg 1091
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>ref|NM_001024613.1| Homo sapiens zinc finger protein 312-like (LOC389549), mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 ccgcgggcgccgccggggcc 156
           ||||||||||||||||||||
Sbjct: 430 ccgcgggcgccgccggggcc 411
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 228      cgccgcggccgagcaccgcc 247
                ||||||||||||||||||||
Sbjct: 21417122 cgccgcggccgagcaccgcc 21417141
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>gb|AF521897.1| Streptomyces hygroscopicus ansamycin biosynthesis gene cluster,
            partial sequence
          Length = 6567

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 122  gggcggcgtccccgtccgcgggcgccgccggggccg 157
            |||| |||||| || | |||||||||||||||||||
Sbjct: 2346 gggctgcgtcctcggcggcgggcgccgccggggccg 2311
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     tcttcgccgccgccgtcttc 291
               ||||||||||||||||||||
Sbjct: 7889996 tcttcgccgccgccgtcttc 7890015



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cctgcggcgaggtccagccc 49
             ||||||||||||||||||||
Sbjct: 16381 cctgcggcgaggtccagccc 16400
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>gb|AE004456.1| Pseudomonas aeruginosa PAO1, section 17 of 529 of the complete genome
          Length = 12534

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   gcgaggtccagccctgcgcc 55
            ||||||||||||||||||||
Sbjct: 6895 gcgaggtccagccctgcgcc 6914
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     cgccgccggggccgccggcg 163
               ||||||||||||||||||||
Sbjct: 1069154 cgccgccggggccgccggcg 1069173
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>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0513E02
          Length = 141477

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cgccgcggccgagcaccgcc 247
             ||||||||||||||||||||
Sbjct: 51622 cgccgcggccgagcaccgcc 51641
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>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0063H21
          Length = 188058

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    tcttcgccgccgccgtcttc 291
              ||||||||||||||||||||
Sbjct: 132368 tcttcgccgccgccgtcttc 132349
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tcttcgccgccgccgtcttc 291
             ||||||||||||||||||||
Sbjct: 17525 tcttcgccgccgccgtcttc 17506
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>dbj|AK064148.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-C09, full
           insert sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 tcttcgccgccgccgtcttc 291
           ||||||||||||||||||||
Sbjct: 28  tcttcgccgccgccgtcttc 9
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>dbj|AK062545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-G06, full
           insert sequence
          Length = 591

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cgccgccggggccgccggcg 163
           ||||||||||||||||||||
Sbjct: 159 cgccgccggggccgccggcg 178
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>dbj|AK061590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H05, full
           insert sequence
          Length = 524

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cgccgccggggccgccggcg 163
           ||||||||||||||||||||
Sbjct: 100 cgccgccggggccgccggcg 119
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    cgccgccggggccgccggcg 163
              ||||||||||||||||||||
Sbjct: 742132 cgccgccggggccgccggcg 742151
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>emb|Z68284.1|HSL95E6 Human DNA sequence from clone LA04NC01-95E6 on chromosome 4, complete
             sequence
          Length = 37695

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   gggcgccgccggggccgccg 160
             ||||||||||||||||||||
Sbjct: 29271 gggcgccgccggggccgccg 29290
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>gb|M61119.1|SERFDXA Saccharopolyspora erythraea ferredoxin (fdxA) gene, complete cds
          Length = 3869

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  cgcccgctacgccgcggccg 238
            ||||||||||||||||||||
Sbjct: 1083 cgcccgctacgccgcggccg 1102
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>dbj|AB019326.1| Nolana villosa DNA, internal transcribed spacer 1
          Length = 253

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 ccccgtccgcgggcgccgccgggg 154
           ||||||||||||||||||| ||||
Sbjct: 198 ccccgtccgcgggcgccgcggggg 221
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>dbj|AB019314.1| Nolana mollis DNA, internal transcribed spacer 1
          Length = 251

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 ccccgtccgcgggcgccgccgggg 154
           ||||||||||||||||||| ||||
Sbjct: 196 ccccgtccgcgggcgccgcggggg 219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,072,458
Number of Sequences: 3902068
Number of extensions: 2072458
Number of successful extensions: 57175
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54518
Number of HSP's gapped (non-prelim): 2657
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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