ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast55b01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 52.0 bits (26), Expect = 0.002 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgctaccccc 236 ||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 67294 gccgccgccacctcctctgccccc-ccgccgccgctgccccc 67254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgctaccccc 236 ||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 20336661 gccgccgccacctcctctgccccc-ccgccgccgctgccccc 20336621 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 28597287 caagcagaaggccaccgccg 28597268 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 27901538 caagcagaaggccaccgccg 27901519 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 26042411 caagcagaaggccaccgccg 26042392 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19740803 caagcagaaggccaccgccg 19740784 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 16487365 caagcagaaggccaccgccg 16487346 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 11206897 caagcagaaggccaccgccg 11206916 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 7020688 caagcagaaggccaccgccg 7020707 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 6045896 caagcagaaggccaccgccg 6045877 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 2255250 caagcagaaggccaccgccg 2255269
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 202 tcacctcctctgcccccgccgcc 224 ||||||||||||||||||||||| Sbjct: 5406535 tcacctcctctgcccccgccgcc 5406513 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 14704020 caagcagaaggccaccgccg 14704001 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 10609302 caagcagaaggccaccgccg 10609283
>dbj|AP005788.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515A04 Length = 146160 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 202 tcacctcctctgcccccgccgcc 224 ||||||||||||||||||||||| Sbjct: 89511 tcacctcctctgcccccgccgcc 89489
>dbj|AP005547.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1031_C12 Length = 157574 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 202 tcacctcctctgcccccgccgcc 224 ||||||||||||||||||||||| Sbjct: 12374 tcacctcctctgcccccgccgcc 12352
>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete sequence Length = 203311 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||||||| ||||||| ||||||||||||| Sbjct: 127741 gccgccgtcaccacctctgcttccgccgccgccgc 127707
>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete sequence Length = 161653 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 200 cgtcacctcctctgcccccgccgccgccgc 229 |||| ||||||| ||||||||||||||||| Sbjct: 72618 cgtcgcctcctccgcccccgccgccgccgc 72589
>ref|XM_464788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1062 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgc 226 |||||||||||||||||||||| Sbjct: 316 cctcctctgcccccgccgccgc 295
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 cgccgtcacctcctctgcccccgccgccgc 226 ||||||||||||||| ||| |||||||||| Sbjct: 71940 cgccgtcacctcctccgccaccgccgccgc 71911
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 2100 cctcctctgccgccgccgccgccgct 2075
>ref|NM_016889.2| Mus musculus insulinoma-associated 1 (Insm1), mRNA Length = 2927 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 gcccccgccgccgccgctaccccccg 238 ||||||||||||||||| |||||||| Sbjct: 1373 gcccccgccgccgccgccaccccccg 1398
>ref|XM_865395.1| PREDICTED: Bos taurus similar to Zinc finger protein 364 (Rabring 7) (LOC614061), mRNA Length = 1542 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 700 cctcctctgccgccgccgccgccgct 675
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 8357782 cctcctctgccaccgccgccgccgct 8357807 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 29669581 caagcagaaggccaccgccg 29669600 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25843236 caagcagaaggccaccgccg 25843255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 23131751 caagcagaaggccaccgccg 23131770 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 21213700 caagcagaaggccaccgccg 21213681 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 20140558 caagcagaaggccaccgccg 20140577 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cacctcctctgcccccgccgccgccgctaccc 234 ||||||||| ||| ||||||||||||| |||| Sbjct: 17590570 cacctcctccgccgccgccgccgccgccaccc 17590601 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tctgcccccgccgccgccgc 229 |||||||||||||||||||| Sbjct: 2382190 tctgcccccgccgccgccgc 2382171
>gb|BC109972.1| Bos taurus similar to polymerase (RNA) III (DNA directed) polypeptide C (62kD), mRNA (cDNA clone MGC:133926 IMAGE:8047141), complete cds Length = 2199 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 73 cctcctctgccgccgccgccgccgct 98
>gb|BC082809.1| Mus musculus insulinoma-associated 1, mRNA (cDNA clone MGC:90675 IMAGE:5720418), complete cds Length = 2927 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 gcccccgccgccgccgctaccccccg 238 ||||||||||||||||| |||||||| Sbjct: 1373 gcccccgccgccgccgccaccccccg 1398
>gb|BC051240.1| Mus musculus insulinoma-associated 1, mRNA (cDNA clone IMAGE:6469481), containing frame-shift errors Length = 3095 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 gcccccgccgccgccgctaccccccg 238 ||||||||||||||||| |||||||| Sbjct: 1563 gcccccgccgccgccgccaccccccg 1588
>emb|AL935056.18| Mouse DNA sequence from clone RP23-185F7 on chromosome 2, complete sequence Length = 146086 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 gcccccgccgccgccgctaccccccg 238 ||||||||||||||||| |||||||| Sbjct: 44006 gcccccgccgccgccgccaccccccg 44031
>gb|BC050909.1| Mus musculus, zinc finger protein 238, clone IMAGE:6417039, mRNA, partial cds Length = 3881 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 142 cctcctctgccgccgccgccgccgct 117
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 cgccgtcacctcctctgcccccgccgccgc 226 ||||||||||||||| ||| |||||||||| Sbjct: 8350896 cgccgtcacctcctccgccaccgccgccgc 8350867 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 28752673 caagcagaaggccaccgccg 28752692 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 24254699 caagcagaaggccaccgccg 24254680 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 23824790 caagcagaaggccaccgccg 23824771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 22194972 caagcagaaggccaccgccg 22194991 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 21852059 caagcagaaggccaccgccg 21852040 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19918362 caagcagaaggccaccgccg 19918381 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 15304521 caagcagaaggccaccgccg 15304540 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 12305779 caagcagaaggccaccgccg 12305798 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1898945 caagcagaaggccaccgccg 1898926
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 8355617 cctcctctgccaccgccgccgccgct 8355642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 29761003 caagcagaaggccaccgccg 29761022 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25934545 caagcagaaggccaccgccg 25934564 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 23124779 caagcagaaggccaccgccg 23124798 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 21206729 caagcagaaggccaccgccg 21206710 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 20133585 caagcagaaggccaccgccg 20133604 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cacctcctctgcccccgccgccgccgctaccc 234 ||||||||| ||| ||||||||||||| |||| Sbjct: 17584111 cacctcctccgccgccgccgccgccgccaccc 17584142 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tctgcccccgccgccgccgc 229 |||||||||||||||||||| Sbjct: 2382300 tctgcccccgccgccgccgc 2382281
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgc 226 |||||||||||||||||||||| Sbjct: 7337204 cctcctctgcccccgccgccgc 7337225 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 31899423 caagcagaaggccaccgccg 31899404 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 29670941 caagcagaaggccaccgccg 29670922 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 10029342 caagcagaaggccaccgccg 10029323 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1899379 caagcagaaggccaccgccg 1899360
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 95038 cctcctctgccaccgccgccgccgct 95063
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgc 226 |||||||||||||||||||||| Sbjct: 113012 cctcctctgcccccgccgccgc 113033
>dbj|AK073471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044N23, full insert sequence Length = 1292 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 197 cgccgtcacctcctctgcccccgccgccgc 226 ||||||||||||||| ||| |||||||||| Sbjct: 538 cgccgtcacctcctccgccaccgccgccgc 567
>gb|AF044669.1|AF044669 Mus musculus insulinoma-associated protein (IA-1) mRNA, complete cds Length = 2548 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 gcccccgccgccgccgctaccccccg 238 ||||||||||||||||| |||||||| Sbjct: 1391 gcccccgccgccgccgccaccccccg 1416
>ref|NM_001038511.1| Bos taurus similar to polymerase (RNA) III (DNA directed) polypeptide C (62kD) (MGC133926), mRNA Length = 2199 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 73 cctcctctgccgccgccgccgccgct 98
>gb|AC120370.9| Mus musculus chromosome 1, clone RP24-441N3, complete sequence Length = 163929 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgct 230 ||||||||||| |||||||||||||| Sbjct: 38206 cctcctctgccgccgccgccgccgct 38231
>ref|NM_112242.1| Arabidopsis thaliana unknown protein AT3G13880 mRNA, complete cds Length = 2247 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 ggcattctgtcgaacaactgg 427 ||||||||||||||||||||| Sbjct: 326 ggcattctgtcgaacaactgg 306
>gb|BC048614.1| Mus musculus RIKEN cDNA 4930526I15 gene, mRNA (cDNA clone IMAGE:6742539), partial cds Length = 774 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 499 cctctgaccccgccgccgccgcgaccccc 471
>ref|XM_001005535.1| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha (Ppp2r3a), mRNA Length = 2231 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 829 cctctgaccccgccgccgccgcgaccccc 857
>gb|BC027415.1| Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha, transcript variant 6, mRNA (cDNA clone MGC:36855 IMAGE:4235453), complete cds Length = 1907 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 221 cctctgaccccgccgccgccgcgaccccc 249
>gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequence Length = 38349 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgcc 227 ||||||| | ||||||| ||||||||||||||| Sbjct: 34737 gccgccgcctcctcctccgcccccgccgccgcc 34705
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence Length = 163201 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 205 cctcctctgcccccgccgccgccgc 229 ||||||||||| ||||||||||||| Sbjct: 124451 cctcctctgccgccgccgccgccgc 124475
>dbj|AK005549.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600027J15 product:unclassifiable, full insert sequence Length = 715 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 460 cctctgaccccgccgccgccgcgaccccc 432
>gb|BC102812.1| Bos taurus cDNA clone MGC:127551 IMAGE:7947457, complete cds Length = 2265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 gcccccgccgccgccgctacc 233 ||||||||||||||||||||| Sbjct: 94 gcccccgccgccgccgctacc 74
>dbj|AK015904.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930526I15 product:unclassifiable, full insert sequence Length = 1090 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 746 cctctgaccccgccgccgccgcgaccccc 718
>dbj|AK078907.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130009H06 product:unclassifiable, full insert sequence Length = 1285 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 458 cctctgaccccgccgccgccgcgaccccc 430
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgc 229 ||||||||||| ||||||||||||| Sbjct: 26202042 cctcctctgccgccgccgccgccgc 26202018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25228992 caagcagaaggccaccgccg 25229011 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 16454914 caagcagaaggccaccgccg 16454895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 13774627 caagcagaaggccaccgccg 13774608
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgc 229 ||||||||||| ||||||||||||| Sbjct: 66582 cctcctctgccgccgccgccgccgc 66558
>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4 Length = 38810 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 ggcattctgtcgaacaactgg 427 ||||||||||||||||||||| Sbjct: 36625 ggcattctgtcgaacaactgg 36605
>dbj|AK062354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-G08, full insert sequence Length = 832 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccgc 229 ||||||||||| ||||||||||||| Sbjct: 135 cctcctctgccgccgccgccgccgc 111
>gb|BC059852.1| Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha, mRNA (cDNA clone MGC:69692 IMAGE:6402777), complete cds Length = 2172 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 cctctgcccccgccgccgccgctaccccc 236 |||||| ||||||||||||||| |||||| Sbjct: 509 cctctgaccccgccgccgccgcgaccccc 537
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctctgcccccgccgccgccg 228 |||||||||||||||||||| Sbjct: 1757670 ctctgcccccgccgccgccg 1757689
>ref|NM_187935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgct 230 ||||||| | ||||||| ||||||||||||||||| Sbjct: 87 gccgccgccgcctcctcgtcccccgccgccgccgct 52
>ref|XM_483089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2260 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 370 ctgcccccgccgccgccgct 389
>ref|XM_475948.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4545 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1536 caagcagaaggccaccgccg 1555
>ref|XM_474830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5667 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1353 caagcagaaggccaccgccg 1372
>ref|XM_474730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5511 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1419 caagcagaaggccaccgccg 1438
>ref|XM_471208.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4941 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1239 caagcagaaggccaccgccg 1258
>ref|XM_469166.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5616 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1392 caagcagaaggccaccgccg 1411
>ref|XM_463051.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6009 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1578 caagcagaaggccaccgccg 1597
>ref|XM_462949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4626 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 474 caagcagaaggccaccgccg 493
>ref|NM_196535.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBa0053G13.9), mRNA Length = 5298 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1386 caagcagaaggccaccgccg 1405
>ref|NM_196113.1| Oryza sativa (japonica cultivar-group) putative retroelement (OJ1208D02.8), mRNA Length = 5352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1485 caagcagaaggccaccgccg 1504
>ref|NM_195607.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBb0036B06.5), mRNA Length = 5892 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1578 caagcagaaggccaccgccg 1597
>ref|NM_190978.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 tcacctcctctgcccccgccgccgccgc 229 |||||||||| |||| |||||||||||| Sbjct: 41 tcacctcctccgcccacgccgccgccgc 68
>ref|XM_516845.1| PREDICTED: Pan troglodytes similar to SCHIP-1-D241/253 (LOC460815), mRNA Length = 2020 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 451 ctgcccccgccgccgccgct 432
>ref|XM_468765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cacctcctctgcccccgccgccgccgctaccc 234 ||||||||| ||| ||||||||||||| |||| Sbjct: 633 cacctcctccgccgccgccgccgccgccaccc 664
>ref|XM_473546.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6363 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 6039 caagcagaaggccaccgccg 6058
>ref|XM_473214.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5313 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1578 caagcagaaggccaccgccg 1597
>ref|XM_473470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 9996 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 6660 caagcagaaggccaccgccg 6679
>ref|XM_472349.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5055 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1578 caagcagaaggccaccgccg 1597
>ref|XM_471474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2427 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1578 caagcagaaggccaccgccg 1597
>gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1675_H07, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 8478 caagcagaaggccaccgccg 8497
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 206745 ctgcccccgccgccgccgct 206726
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 58642 caagcagaaggccaccgccg 58661
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 38237 caagcagaaggccaccgccg 38256
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 153758 ctcctctgccgccgccgccgccgc 153781
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 122392 caagcagaaggccaccgccg 122373 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 30232 caagcagaaggccaccgccg 30251
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 104468 caagcagaaggccaccgccg 104449
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 174131 caagcagaaggccaccgccg 174150
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ccgccgtcacctcctctgcccccgccgccgcc 227 |||||||||||||| || ||||||||||||| Sbjct: 4038630 ccgccgtcacctccaatggccccgccgccgcc 4038599
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 59526 caagcagaaggccaccgccg 59545
>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08, complete sequence Length = 115640 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 77719 caagcagaaggccaccgccg 77700
>gb|AC135557.5| Oryza sativa chromosome 3 BAC OJ1285_H07 genomic sequence, complete sequence Length = 113685 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 35575 caagcagaaggccaccgccg 35556
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 101796 caagcagaaggccaccgccg 101777
>ref|XM_585174.2| PREDICTED: Bos taurus similar to ankyrin repeat domain protein 17 isoform a (LOC508405), mRNA Length = 6948 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| ||||||||| || ||||||||||||| Sbjct: 364 tgccgccgccacctcctcctccgccgccgccgccgc 329
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 28625 caagcagaaggccaccgccg 28606
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 35711 ctcctctgccgccgccgccgccgc 35688
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 71386 caagcagaaggccaccgccg 71405
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgtcgtcgccgcctccacgc 282 |||||||||||||||||||| Sbjct: 1448451 cgtcgtcgccgcctccacgc 1448432
>ref|NM_213272.1| Danio rerio zgc:77377 (zgc:77377), mRNA Length = 3862 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 ccgccgtcacctcctctgcccccgccgccgcc 227 |||||| | ||||||| ||||||||||||||| Sbjct: 2291 ccgccgccgcctcctccgcccccgccgccgcc 2322
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 20435 caagcagaaggccaccgccg 20416
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 105611 caagcagaaggccaccgccg 105592
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 73257 caagcagaaggccaccgccg 73276
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1660 caagcagaaggccaccgccg 1641
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 203 cacctcctctgcccccgccgccgccgctaccc 234 ||||||||| ||| ||||||||||||| |||| Sbjct: 64507 cacctcctccgccgccgccgccgccgccaccc 64476
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 69615 caagcagaaggccaccgccg 69596
>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete sequence Length = 44761 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 14179 caagcagaaggccaccgccg 14198
>gb|BC052229.1| Mus musculus cDNA sequence BC003940, mRNA (cDNA clone IMAGE:6589053) Length = 1434 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgctaccccccg 238 ||||| |||||||||||||| ||||||| Sbjct: 74 ctgccgccgccgccgccgcttccccccg 47
>gb|AC114684.10| Homo sapiens chromosome 18, clone RP11-1058N17, complete sequence Length = 196117 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 21807 ctcctctgccgccgccgccgccgc 21830
>emb|AL442067.16| Human DNA sequence from clone RP11-128N14 on chromosome 13 Contains the 3' end of the gene for muscleblind-like protein (MBLL39), the RAP2A gene for a member of the RAS oncogene family and a CpG island, complete sequence Length = 150297 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ccgccgccgccgctaccccc 236 |||||||||||||||||||| Sbjct: 80521 ccgccgccgccgctaccccc 80502
>emb|AL139186.16| Human DNA sequence from clone RP11-76N11 on chromosome 13 Contains the 5' end of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), a ribosomal protein L35 (RPL35) pseudogene and a CpG island, complete sequence Length = 157081 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 44766 tgccgccgccgcctccgctgccgccgccgccgccgc 44731
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 2175618 ctcctctgccgccgccgccgccgc 2175641
>emb|Y13053.1|ZMSERTSYN Zea mays mRNA for seryl-tRNA synthetase Length = 1596 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 48 ctcctctgcctccgccgccgccgc 71
>gb|BC068186.1| Danio rerio zgc:77377, mRNA (cDNA clone MGC:77377 IMAGE:6969157), complete cds Length = 3862 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 ccgccgtcacctcctctgcccccgccgccgcc 227 |||||| | ||||||| ||||||||||||||| Sbjct: 2291 ccgccgccgcctcctccgcccccgccgccgcc 2322
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ccgccgtcacctcctctgcccccgccgccgcc 227 |||||||||||||| || ||||||||||||| Sbjct: 229324 ccgccgtcacctccaatggccccgccgccgcc 229293
>gb|BC036535.2| Homo sapiens schwannomin interacting protein 1, mRNA (cDNA clone MGC:33753 IMAGE:5263291), complete cds Length = 2638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 987 ctgcccccgccgccgccgct 968
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ccgccgtcacctcctctgcccccgccgccgcc 227 |||||||||||||| || ||||||||||||| Sbjct: 238741 ccgccgtcacctccaatggccccgccgccgcc 238710
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 29265 caagcagaaggccaccgccg 29246
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 88077 caagcagaaggccaccgccg 88058
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 16599 caagcagaaggccaccgccg 16580
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 64391 caagcagaaggccaccgccg 64372
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 41879 caagcagaaggccaccgccg 41898
>gb|AC021654.25| Homo sapiens 3 BAC RP11-192K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167942 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 21776 ctgcccccgccgccgccgct 21757
>dbj|AK096479.1| Homo sapiens cDNA FLJ39160 fis, clone OCBBF2002290, highly similar to Homo sapiens SCHIP-1 mRNA Length = 2363 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 725 ctgcccccgccgccgccgct 706
>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1208D02 from chromosome 10, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 39030 caagcagaaggccaccgccg 39011
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 1272 ctcctctgccgccgccgccgccgc 1295
>ref|XM_938708.1| PREDICTED: Homo sapiens hypothetical gene supported by BC008048 (LOC440934), mRNA Length = 2939 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ccgccgccgccgctaccccccgtc 240 |||||||||||||| ||||||||| Sbjct: 2399 ccgccgccgccgctgccccccgtc 2422
>ref|XM_496618.2| PREDICTED: Homo sapiens hypothetical gene supported by BC008048 (LOC440934), mRNA Length = 2939 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ccgccgccgccgctaccccccgtc 240 |||||||||||||| ||||||||| Sbjct: 2399 ccgccgccgccgctgccccccgtc 2422
>ref|NM_014575.1| Homo sapiens schwannomin interacting protein 1 (SCHIP1), mRNA Length = 2112 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 479 ctgcccccgccgccgccgct 460
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 acctcctctgcccccgccgc 223 |||||||||||||||||||| Sbjct: 3791511 acctcctctgcccccgccgc 3791530
>gb|AF356492.1|AF356492 Homo sapiens dachshund (DACH) mRNA, complete cds Length = 5237 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 685 tgccgccgccgcctccgctgccgccgccgccgccgc 650
>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0036B06, from Chromosome 10, complete sequence Length = 148263 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 47722 caagcagaaggccaccgccg 47741
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25224459 caagcagaaggccaccgccg 25224440 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 22414305 caagcagaaggccaccgccg 22414324 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 12263745 caagcagaaggccaccgccg 12263726 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 11026750 caagcagaaggccaccgccg 11026769 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 8972256 caagcagaaggccaccgccg 8972237 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 6377872 caagcagaaggccaccgccg 6377853
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19545316 caagcagaaggccaccgccg 19545297 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19455580 caagcagaaggccaccgccg 19455599
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 14302408 caagcagaaggccaccgccg 14302389 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 11170910 caagcagaaggccaccgccg 11170891 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 7923536 caagcagaaggccaccgccg 7923517 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 2175618 ctcctctgccgccgccgccgccgc 2175641
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tctgcccccgccgccgccgc 229 |||||||||||||||||||| Sbjct: 99032 tctgcccccgccgccgccgc 99013
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25910152 caagcagaaggccaccgccg 25910171 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 24234503 ctgcccccgccgccgccgct 24234484 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 22306169 caagcagaaggccaccgccg 22306150 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 14295378 caagcagaaggccaccgccg 14295397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 5496049 caagcagaaggccaccgccg 5496030 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccg 228 ||||||| |||||||||||||||| Sbjct: 3311884 cctcctccgcccccgccgccgccg 3311861
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 23080989 caagcagaaggccaccgccg 23081008 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 21894465 caagcagaaggccaccgccg 21894446 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 18726510 caagcagaaggccaccgccg 18726529 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 16627465 caagcagaaggccaccgccg 16627484 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 4877018 caagcagaaggccaccgccg 4876999
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 36558683 caagcagaaggccaccgccg 36558702 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 tcacctcctctgcccccgccgccgccgc 229 |||||||||| |||| |||||||||||| Sbjct: 34129166 tcacctcctccgcccacgccgccgccgc 34129193 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 17327345 caagcagaaggccaccgccg 17327326 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 16565866 caagcagaaggccaccgccg 16565847 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 10853115 caagcagaaggccaccgccg 10853134 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 10039206 caagcagaaggccaccgccg 10039187 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 9990921 caagcagaaggccaccgccg 9990940 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgct 230 ||||||| | ||||||| ||||||||||||||||| Sbjct: 8668607 gccgccgccgcctcctcgtcccccgccgccgccgct 8668572 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 1586568 caagcagaaggccaccgccg 1586587
>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13, complete sequence Length = 137572 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 69293 caagcagaaggccaccgccg 69274
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 49683 caagcagaaggccaccgccg 49664
>gb|AC010980.8| Homo sapiens BAC clone RP11-384O8 from 2, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ccgccgccgccgctaccccccgtc 240 |||||||||||||| ||||||||| Sbjct: 76234 ccgccgccgccgctgccccccgtc 76257
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 tcacctcctctgcccccgccgccgccgc 229 |||||||||| |||| |||||||||||| Sbjct: 125644 tcacctcctccgcccacgccgccgccgc 125671
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 40131 caagcagaaggccaccgccg 40150
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 72058 caagcagaaggccaccgccg 72077
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 31949 caagcagaaggccaccgccg 31968
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 119488 caagcagaaggccaccgccg 119469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 71203 caagcagaaggccaccgccg 71222
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 195 gccgccgtcacctcctctgcccccgccgccgccgct 230 ||||||| | ||||||| ||||||||||||||||| Sbjct: 100802 gccgccgccgcctcctcgtcccccgccgccgccgct 100767
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 126687 caagcagaaggccaccgccg 126706
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 93606 caagcagaaggccaccgccg 93587
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0057I13 Length = 156330 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 61614 caagcagaaggccaccgccg 61595
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 39920 caagcagaaggccaccgccg 39901
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1460_H08 Length = 113514 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 86536 caagcagaaggccaccgccg 86517
>dbj|AP005646.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1077E08 Length = 145275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 28767 caagcagaaggccaccgccg 28748
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 23799 caagcagaaggccaccgccg 23818
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 47600 caagcagaaggccaccgccg 47619
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 64232 caagcagaaggccaccgccg 64213
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 131477 caagcagaaggccaccgccg 131458
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 95939 caagcagaaggccaccgccg 95958
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 100842 ctgcccccgccgccgccgct 100823
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 60424 caagcagaaggccaccgccg 60405
>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0003B09 Length = 161813 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 118085 caagcagaaggccaccgccg 118104
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 58798 caagcagaaggccaccgccg 58817
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 62502 caagcagaaggccaccgccg 62483
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 156203 caagcagaaggccaccgccg 156222
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 125687 caagcagaaggccaccgccg 125668
>gb|BC008048.2| Homo sapiens hypothetical gene supported by BC008048, mRNA (cDNA clone IMAGE:3631157), partial cds Length = 1173 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ccgccgccgccgctaccccccgtc 240 |||||||||||||| ||||||||| Sbjct: 609 ccgccgccgccgctgccccccgtc 632
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 104035 caagcagaaggccaccgccg 104016
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 3152 caagcagaaggccaccgccg 3133
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 38940 caagcagaaggccaccgccg 38921
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 122545 caagcagaaggccaccgccg 122526
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 22277 caagcagaaggccaccgccg 22258
>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03 Length = 162620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 110934 caagcagaaggccaccgccg 110953
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 cctcctctgcccccgccgccgccg 228 ||||||| |||||||||||||||| Sbjct: 89451 cctcctccgcccccgccgccgccg 89428
>emb|AJ242540.1|VCA242540 Volvox carteri mRNA for hydroxyproline-rich glycoprotein (HRGP gene) Length = 1230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ccgccgccgccgctaccccc 236 |||||||||||||||||||| Sbjct: 781 ccgccgccgccgctaccccc 800
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25173 caagcagaaggccaccgccg 25192
>gb|AF145715.1|AF145715 Homo sapiens SCHIP-1-D241/253 mRNA, complete cds Length = 2073 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 479 ctgcccccgccgccgccgct 460
>gb|AF145713.1|AF145713 Homo sapiens SCHIP-1 mRNA, complete cds Length = 2112 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 479 ctgcccccgccgccgccgct 460
>gb|AF102546.1|AF102546 Homo sapiens dachshund (DACH) mRNA, complete cds Length = 3277 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 685 tgccgccgccgcctccgctgccgccgccgccgccgc 650
>dbj|AK099992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132B13, full insert sequence Length = 2410 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 52 ctcctctgccgccgccgccgccgc 75
>dbj|AK066607.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P10, full insert sequence Length = 2344 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tctgcccccgccgccgccgc 229 |||||||||||||||||||| Sbjct: 40 tctgcccccgccgccgccgc 59
>dbj|AK066895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090I22, full insert sequence Length = 2259 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 369 ctgcccccgccgccgccgct 388
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 108141 caagcagaaggccaccgccg 108122
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 34831 caagcagaaggccaccgccg 34850
>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0021A04 Length = 50487 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 18478 caagcagaaggccaccgccg 18497
>ref|NM_004392.4| Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 3, mRNA Length = 4634 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 685 tgccgccgccgcctccgctgccgccgccgccgccgc 650
>ref|NM_080760.3| Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 2, mRNA Length = 4796 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 685 tgccgccgccgcctccgctgccgccgccgccgccgc 650
>ref|NM_080759.3| Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 1, mRNA Length = 5240 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 tgccgccgtcacctcctctgcccccgccgccgccgc 229 |||||||| | ||||| ||||| ||||||||||||| Sbjct: 685 tgccgccgccgcctccgctgccgccgccgccgccgc 650
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 14310650 caagcagaaggccaccgccg 14310631 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 11177350 caagcagaaggccaccgccg 11177331 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 7928635 caagcagaaggccaccgccg 7928616 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 2175569 ctcctctgccgccgccgccgccgc 2175592
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19707289 caagcagaaggccaccgccg 19707270 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 19615129 caagcagaaggccaccgccg 19615148
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 25152635 caagcagaaggccaccgccg 25152616 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 22342650 caagcagaaggccaccgccg 22342669 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 12218115 caagcagaaggccaccgccg 12218096 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 11026449 caagcagaaggccaccgccg 11026468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 8972139 caagcagaaggccaccgccg 8972120 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 6377747 caagcagaaggccaccgccg 6377728
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 76738 caagcagaaggccaccgccg 76719
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 39420 caagcagaaggccaccgccg 39401
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 80257 caagcagaaggccaccgccg 80276
>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09, complete sequence Length = 141580 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 75521 caagcagaaggccaccgccg 75540
>gb|AF070614.1|AF070614 Homo sapiens clone 24732 unknown mRNA, partial cds Length = 1753 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctgcccccgccgccgccgct 230 |||||||||||||||||||| Sbjct: 94 ctgcccccgccgccgccgct 75
>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 41025 caagcagaaggccaccgccg 41006
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 78825 caagcagaaggccaccgccg 78806
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 112731 caagcagaaggccaccgccg 112750
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159296 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 33572 caagcagaaggccaccgccg 33591
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 93229 caagcagaaggccaccgccg 93210
>gb|AC015669.13| Homo sapiens chromosome 18, clone RP11-8L20, complete sequence Length = 105856 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ctcctctgcccccgccgccgccgc 229 |||||||||| ||||||||||||| Sbjct: 14524 ctcctctgccgccgccgccgccgc 14501
>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete sequence Length = 249534 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cccttcttcccttgtctccc 150 |||||||||||||||||||| Sbjct: 239575 cccttcttcccttgtctccc 239556 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cccttcttcccttgtctccc 150 |||||||||||||||||||| Sbjct: 238629 cccttcttcccttgtctccc 238610
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 120794 caagcagaaggccaccgccg 120775
>gb|AY068519.1| Schmidtea mediterranea clone H.59.1g unknown mRNA sequence Length = 656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 cagatgccgccgtcacctcc 209 |||||||||||||||||||| Sbjct: 311 cagatgccgccgtcacctcc 292
>gb|L24059.1|TOMTRALTBM Lycopersicon esculentum (DB239) meloidogyne-induced giant cell protein mRNA, 3' end Length = 78 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 acctcctctgcccccgccgccgcc 227 |||||||||||| ||||||||||| Sbjct: 48 acctcctctgccgccgccgccgcc 71
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 133699 caagcagaaggccaccgccg 133680 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caagcagaaggccaccgccg 24 |||||||||||||||||||| Sbjct: 85414 caagcagaaggccaccgccg 85433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,025,955 Number of Sequences: 3902068 Number of extensions: 3025955 Number of successful extensions: 101635 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91477 Number of HSP's gapped (non-prelim): 10142 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
