>PR1A_LYCES (Q08697) Pathogenesis-related protein 1A1 precursor (PR-1A1)|
          Length = 175

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRS 368
           ++A     + L+AHNAARR VGV P+TW  G+A YA++YA  R  DC  + S
Sbjct: 19  SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHS 70

>PR1A_TOBAC (P08299) Pathogenesis-related protein 1A precursor (PR-1A)|
          Length = 168

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 26/50 (52%), Positives = 30/50 (60%)
 Frame = +3

Query: 204 SRRARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           S   RA  +  D L AHN AR  VGVEPLTW   +A YA++YA    ADC
Sbjct: 25  SHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

>PR1B_TOBAC (P07053) Pathogenesis-related protein 1B precursor (PR-1B)|
          Length = 168

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 25/50 (50%), Positives = 30/50 (60%)
 Frame = +3

Query: 204 SRRARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           S  + A  +  D L AHN AR  VGVEPLTW  G+A YA++Y     ADC
Sbjct: 25  SHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADC 74

>PRB1_TOBAC (P11670) Basic form of pathogenesis-related protein 1 precursor|
           (PRP 1)
          Length = 177

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRS 368
           ++A  +  D L+ HNAARR VGV P+TW   +A YA++YA  R  DC  + S
Sbjct: 21  SKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHS 72

>PR1C_TOBAC (P09042) Pathogenesis-related protein 1C precursor (PR-1C)|
          Length = 168

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/50 (50%), Positives = 29/50 (58%)
 Frame = +3

Query: 204 SRRARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           S    A  +  D L AHN AR  VGVEPLTW   +A YA++YA    ADC
Sbjct: 25  SHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

>PR1_SAMNI (Q41359) Pathogenesis-related protein PR-1 type precursor|
          Length = 167

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRSSLFYFGE 389
           D + AHNAAR  V V P+TW   +A +A+ YA+SR  DC  + S    +GE
Sbjct: 34  DYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPRYGE 84

>PR06_LYCES (P04284) Pathogenesis-related leaf protein 6 precursor (P6)|
           (Ethylene-induced protein P1) (P14) (P14A) (PR protein)
          Length = 159

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRS 368
           D L+ HN AR  VGV P++W   +A  A++YA SR  DC  + S
Sbjct: 30  DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS 73

>PR04_LYCES (Q04108) Pathogenesis-related leaf protein 4 precursor (P4)|
          Length = 159

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRS 368
           D L+ HN AR  VGV P++W   +A  A++YA SR  DC  + S
Sbjct: 30  DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS 73

>PR1_ARATH (P33154) Pathogenesis-related protein 1 precursor (PR-1)|
          Length = 161

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCAPLRS 368
           ++A  +  D L  HN AR  VGV P+ W   +A YA+ YA   R +C  + S
Sbjct: 24  SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHS 75

>PR1_HORVU (Q05968) Pathogenesis-related protein 1 precursor|
          Length = 164

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           ++A  +  D +S HNAAR  VGV  ++WS  +  +A++YA  R  DC
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDC 68

>PR13_HORVU (P35793) Pathogenesis-related protein PRB1-3 precursor (PR-1B)|
           (HV-8)
          Length = 164

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           ++A  +  D +S HNAAR  VGV  ++WS  +  +A++YA  R  DC
Sbjct: 22  SQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDC 68

>PR12_HORVU (P35792) Pathogenesis-related protein PRB1-2 precursor|
          Length = 164

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 213 ARANATVADILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           ++A  +  D +S HNAAR  VGV  ++WS  +  +A++YA  R  DC
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDC 68

>PRMS_MAIZE (Q00008) Pathogenesis-related protein PRMS precursor|
          Length = 167

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADC 353
           D L+  N+AR  VGV P+TWS  +  +A+ YA  R  DC
Sbjct: 33  DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDC 71

>PR1_MEDTR (Q40374) Pathogenesis-related protein PR-1 precursor|
          Length = 173

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +3

Query: 243 LSAHNAARRTVGVEPLTWSPGIAGYAKDYARSRRADCA 356
           L   N AR  VG+ PL W   +  YA+ YA  RR DCA
Sbjct: 42  LIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCA 79

>PR1_CUCME (P83834) Pathogenesis-related protein (PR-1) (Allergen Cuc m 3)|
           (Fragments)
          Length = 41

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIAGYAKDYARSR 341
           D + AHNAAR  VGV P+ W+  +  YA+ YA  R
Sbjct: 1   DFVDAHNAARAQVGVGPVHWT--VDAYARQYANDR 33

>ST14_SOLTU (Q41495) STS14 protein precursor|
          Length = 214

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +3

Query: 237 DILSAHNAARRTVGVEPLTWSPGIA 311
           + L AHN AR  VGV PLTWSP +A
Sbjct: 78  EFLDAHNKARSEVGVGPLTWSPMLA 102

>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
          Length = 881

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 234 ADILSAHNAARRT-VGVEPLTWSPGIAGYAKDYA 332
           +D+L+ HN  R   V   PLTWS  +A YA++YA
Sbjct: 27  SDVLNEHNKFRALHVDTAPLTWSDTLATYAQNYA 60

>PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in Sc 1)|
          Length = 299

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 234 ADILSAHNAARRTVGVEP-LTWSPGIAGYAKDYA 332
           + +L+ HN  R      P L+WS  +A YA+DYA
Sbjct: 164 SSVLAEHNKKRALHKDTPALSWSDTLASYAQDYA 197

>TSP3_BRARE (Q8JHW2) Thrombospondin-3 precursor (Thbs3)|
          Length = 962

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 285 PLTWSPGIAGYAKDYARSRRADCAPL 362
           P  W P ++G   +YA+S R +C+ +
Sbjct: 349 PGMWGPPLSGVGVEYAKSHRQECSDI 374

>NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2|
            chromosomal region candidate gene 17 protein)
          Length = 1314

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 19   LSISNLNTTKLSVNPRKWRTQGWPFTCATATSPYSYSL 132
            LSI +L++  LS+NP   R    P  C   T  YS+ L
Sbjct: 1229 LSIRDLHSLNLSINPLAMRL---PIHCVCVTKEYSHIL 1263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,240,243
Number of Sequences: 219361
Number of extensions: 620218
Number of successful extensions: 2031
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)