ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
2dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
3gb|BT016427.1| Zea mays clone Contig260 mRNA sequence 161 3e-36
4gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate syn... 161 3e-36
5gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA... 161 3e-36
6gb|AY108110.1| Zea mays PCO074380 mRNA sequence 161 3e-36
7gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (f... 161 3e-36
8gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full ... 133 6e-28
9gb|AY110411.1| Zea mays CL242_1 mRNA sequence 107 3e-20
10ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
11dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
12dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for fa... 105 1e-19
13gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 98 3e-17
14gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
15gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
17gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-... 92 2e-15
18gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence 82 2e-12
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
20dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
21dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gen... 60 7e-06
22gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 46 0.10
23gb|AF470318.1| Musa acuminata farnesyl pyrophosphare synthase (F... 46 0.10
24ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE... 44 0.41
25ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE... 44 0.41
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.41
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.41
28emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.41
29gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosph... 44 0.41
30gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosph... 44 0.41
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.41
32emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ... 44 0.41
33emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 44 0.41
34emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Co... 44 0.41
35gb|L46350.2|ATHFPS2G Arabidopsis thaliana farnesyl diphosphate s... 44 0.41
36gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.41
37gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate s... 44 0.41
38ref|NM_184903.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
39ref|NM_186849.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
40ref|XM_604169.2| PREDICTED: Bos taurus similar to malic enzyme 3... 42 1.6
41gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
44dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
45dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
46dbj|AK107354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
47gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, c... 42 1.6
48gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, compl... 42 1.6
49emb|AJ970535.1| Triticum turgidum subsp. durum partial mRNA for ... 42 1.6
50gb|U15777.1|LAU15777 Lupinus albus farnesyl pyrophosphate syntha... 42 1.6
51gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genom... 42 1.6
52gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome... 40 6.4
53gb|BC094564.1| Mus musculus mitogen-activated protein kinase 4, ... 40 6.4
54gb|AC126042.3| Mus musculus BAC clone RP24-303J10 from chromosom... 40 6.4
55gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosom... 40 6.4
56gb|AY281353.1| Uncultured Acidobacteria bacterium clone 32d1 gen... 40 6.4
57gb|BC062911.1| Mus musculus mitogen-activated protein kinase 4, ... 40 6.4
58gb|BC058942.1| Mus musculus mitogen-activated protein kinase 4, ... 40 6.4
59gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.4
60emb|Z21935.1|RNPROKINA R.norvegicus protein kinase rMNK2 40 6.4
61gb|BC091275.1| Rattus norvegicus keratin complex 1, acidic, gene... 40 6.4
62ref|NM_053976.1| Rattus norvegicus keratin complex 1, acidic, ge... 40 6.4
63gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.4
64ref|NM_172632.2| Mus musculus mitogen-activated protein kinase 4... 40 6.4
65gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome ... 40 6.4
66gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 6.4
67gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosom... 40 6.4
68gb|AC006615.1| Caenorhabditis elegans cosmid C36B7, complete seq... 40 6.4
69dbj|AK079654.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 6.4
70ref|NM_076797.1| Caenorhabditis elegans C36B7.2 (C36B7.2) mRNA, ... 40 6.4
71ref|XM_225726.3| PREDICTED: Rattus norvegicus mitogen-activated ... 40 6.4
72gb|AC154475.2| Mus musculus BAC clone RP24-130B12 from 17, compl... 40 6.4
73gb|AF140062.1|AF140062 Phanerochaete chrysosporium lignin peroxi... 40 6.4
74emb|X81448.1|RNKER18 R.norvegicus mRNA for keratin 18 40 6.4
75emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 6.4 
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full
           insert sequence
          Length = 1452

 Score =  174 bits (88), Expect = 2e-40
 Identities = 130/144 (90%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 286 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 345

                                                                       
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgt 426
           |||||| |||||| |||||||||||||||  ||||| || ||||| ||||| ||||| ||
Sbjct: 346 gatcgatcgcatgttggactacaatgtacctggagggaagtgcaatcgtggtctctctgt 405

                                   
Query: 427 ggtcgatagctataagctgttgaa 450
           ||||||||||||||||||||||||
Sbjct: 406 ggtcgatagctataagctgttgaa 429
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>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full
           insert sequence
          Length = 1452

 Score =  174 bits (88), Expect = 2e-40
 Identities = 130/144 (90%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 358 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 417

                                                                       
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgt 426
           |||||| |||||| |||||||||||||||  ||||| || ||||| ||||| ||||| ||
Sbjct: 418 gatcgatcgcatgttggactacaatgtacctggagggaagtgcaatcgtggtctctctgt 477

                                   
Query: 427 ggtcgatagctataagctgttgaa 450
           ||||||||||||||||||||||||
Sbjct: 478 ggtcgatagctataagctgttgaa 501
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>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence
          Length = 1469

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
           |||||| |||||| ||||||||||||||| |  |||||||||||||||||||||  ||||
Sbjct: 172 acaccagggcggccttcgcgcggatctacaagacgctcaaggaggagctgctcaccgacc 231

                                                                       
Query: 333 ccgccttcgactacaccgagtcgtcgcaccagtggatcgaccgcatgctggactacaatg 392
           | |||||||| | |||||||  ||| | ||||||||||||||||||| | ||||||||||
Sbjct: 232 cggccttcgagttcaccgaggagtcacgccagtggatcgaccgcatggttgactacaatg 291

                                                                
Query: 393 tactgggaggaaaatgcaaccgtgggctctccgtggtcgatagctataagctg 445
           |||| ||||| || || |||||||||||||| |||||||| ||||| ||||||
Sbjct: 292 tactcggaggcaagtgtaaccgtgggctctctgtggtcgacagctacaagctg 344
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>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA,
           partial cds
          Length = 1250

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
           |||||| |||||| ||||||||||||||| |  |||||||||||||||||||||  ||||
Sbjct: 5   acaccagggcggccttcgcgcggatctacaagacgctcaaggaggagctgctcaccgacc 64

                                                                       
Query: 333 ccgccttcgactacaccgagtcgtcgcaccagtggatcgaccgcatgctggactacaatg 392
           | |||||||| | |||||||  ||| | ||||||||||||||||||| | ||||||||||
Sbjct: 65  cggccttcgagttcaccgaggagtcacgccagtggatcgaccgcatggttgactacaatg 124

                                                                
Query: 393 tactgggaggaaaatgcaaccgtgggctctccgtggtcgatagctataagctg 445
           |||| ||||| || || |||||||||||||| |||||||| ||||| ||||||
Sbjct: 125 tactcggaggcaagtgtaaccgtgggctctctgtggtcgacagctacaagctg 177
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>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds
          Length = 1399

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
           |||||| |||||| ||||||||||||||| |  |||||||||||||||||||||  ||||
Sbjct: 154 acaccagggcggccttcgcgcggatctacaagacgctcaaggaggagctgctcaccgacc 213

                                                                       
Query: 333 ccgccttcgactacaccgagtcgtcgcaccagtggatcgaccgcatgctggactacaatg 392
           | |||||||| | |||||||  ||| | ||||||||||||||||||| | ||||||||||
Sbjct: 214 cggccttcgagttcaccgaggagtcacgccagtggatcgaccgcatggttgactacaatg 273

                                                                
Query: 393 tactgggaggaaaatgcaaccgtgggctctccgtggtcgatagctataagctg 445
           |||| ||||| || || |||||||||||||| |||||||| ||||| ||||||
Sbjct: 274 tactcggaggcaagtgtaaccgtgggctctctgtggtcgacagctacaagctg 326
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>gb|AY108110.1| Zea mays PCO074380 mRNA sequence
          Length = 1453

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
           |||||| |||||| ||||||||||||||| |  |||||||||||||||||||||  ||||
Sbjct: 154 acaccagggcggccttcgcgcggatctacaagacgctcaaggaggagctgctcaccgacc 213

                                                                       
Query: 333 ccgccttcgactacaccgagtcgtcgcaccagtggatcgaccgcatgctggactacaatg 392
           | |||||||| | |||||||  ||| | ||||||||||||||||||| | ||||||||||
Sbjct: 214 cggccttcgagttcaccgaggagtcacgccagtggatcgaccgcatggttgactacaatg 273

                                                                
Query: 393 tactgggaggaaaatgcaaccgtgggctctccgtggtcgatagctataagctg 445
           |||| ||||| || || |||||||||||||| |||||||| ||||| ||||||
Sbjct: 274 tactcggaggcaagtgtaaccgtgggctctctgtggtcgacagctacaagctg 326
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>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds
          Length = 1378

 Score =  161 bits (81), Expect = 3e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
           |||||| |||||| ||||||||||||||| |  |||||||||||||||||||||  ||||
Sbjct: 128 acaccagggcggccttcgcgcggatctacaagacgctcaaggaggagctgctcaccgacc 187

                                                                       
Query: 333 ccgccttcgactacaccgagtcgtcgcaccagtggatcgaccgcatgctggactacaatg 392
           | |||||||| | |||||||  ||| | ||||||||||||||||||| | ||||||||||
Sbjct: 188 cggccttcgagttcaccgaggagtcacgccagtggatcgaccgcatggttgactacaatg 247

                                                                
Query: 393 tactgggaggaaaatgcaaccgtgggctctccgtggtcgatagctataagctg 445
           |||| ||||| || || |||||||||||||| |||||||| ||||| ||||||
Sbjct: 248 tactcggaggcaagtgtaaccgtgggctctctgtggtcgacagctacaagctg 300
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>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA
           sequence
          Length = 1301

 Score =  133 bits (67), Expect = 6e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           ||||||||||||| |||||  ||||||||||||||| | ||||||   ||||| ||||||
Sbjct: 126 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtcgctccagtg 185

                                                                       
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgt 426
           |||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||
Sbjct: 186 gatcgagcgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 245

                                              
Query: 427 ggtcgatagctataagctgttgaaaggtgtggatg 461
             |||||||||| |||   ||||||||||| ||||
Sbjct: 246 catcgatagctacaagacattgaaaggtgtagatg 280
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>gb|AY110411.1| Zea mays CL242_1 mRNA sequence
          Length = 2504

 Score =  107 bits (54), Expect = 3e-20
 Identities = 126/150 (84%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           ||||||| ||||| |||||  ||||||||||||||| | ||| ||   ||||| ||||||
Sbjct: 189 gctcaagcaggagatgctcgaggaccccgccttcgaattcactgacgagtcgctccagtg 248

                                                                       
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgt 426
           ||||||||||||| |||| |||||||| || |||||||| ||||| |||||||| || ||
Sbjct: 249 gatcgaccgcatgttggattacaatgtgcttggaggaaagtgcaatcgtgggctatctgt 308

                                         
Query: 427 ggtcgatagctataagctgttgaaaggtgt 456
            ||||||||||| ||| | ||||| |||||
Sbjct: 309 tgtcgatagctacaagattttgaagggtgt 338
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>ref|NM_192229.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score =  105 bits (53), Expect = 1e-19
 Identities = 101/117 (86%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 75  gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 134

                                                                    
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctc 423
           |||||||||||||||||| |||||||| || |||||||| |||||||| ||| ||||
Sbjct: 135 gatcgaccgcatgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctc 191
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>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full
           insert sequence
          Length = 1332

 Score =  105 bits (53), Expect = 1e-19
 Identities = 101/117 (86%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 159 gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 218

                                                                    
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctc 423
           |||||||||||||||||| |||||||| || |||||||| |||||||| ||| ||||
Sbjct: 219 gatcgaccgcatgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctc 275
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>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl
           pyrophosphate synthase, complete cds
          Length = 1289

 Score =  105 bits (53), Expect = 1e-19
 Identities = 101/117 (86%)
 Strand = Plus / Plus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 116 gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 175

                                                                    
Query: 367 gatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggctctc 423
           |||||||||||||||||| |||||||| || |||||||| |||||||| ||| ||||
Sbjct: 176 gatcgaccgcatgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctc 232
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                          
Query: 273    acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
              |||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |
Sbjct: 115317 acactaaggcggcgttcgtgcggagctacgacgtgctcaaggaggagctgctcagggatc 115376

                                   
Query: 333    ccgccttcgactacaccgagt 353
               ||||| ||| ||||||||||
Sbjct: 115377 acgcctccgagtacaccgagt 115397



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                         
Query: 273   acaccaaggcggcgttcgcgcggatctacgacgcgctcaaggaggagctgctcagggacc 332
             |||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |
Sbjct: 75604 acactaaggcggcgttcgtgcggagctacgacgtgctcaaggaggagctgctcagggatc 75663

                                  
Query: 333   ccgccttcgactacaccgagt 353
              ||||| ||| ||||||||||
Sbjct: 75664 acgcctccgagtacaccgagt 75684
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>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07,
             complete sequence
          Length = 122120

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                         
Query: 307   gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
             |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 44685 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 44626

                   
Query: 367   gatcga 372
             ||||||
Sbjct: 44625 gatcga 44620



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 407   tgcaaccgtgggctctccgtggtcgatagctataagctgttgaa 450
             ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 43870 tgcaatcgtggtctctctgtggtcgatagctataagctgttgaa 43827
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>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1206_C08, complete sequence
          Length = 115026

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 307 gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
           |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 986 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 927

                 
Query: 367 gatcga 372
           ||||||
Sbjct: 926 gatcga 921



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 407 tgcaaccgtgggctctccgtggtcgatagctataagctgttgaa 450
           ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 171 tgcaatcgtggtctctctgtggtcgatagctataagctgttgaa 128
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                            
Query: 307      gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
                |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 26762746 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 26762687

                      
Query: 367      gatcga 372
                ||||||
Sbjct: 26762686 gatcga 26762681



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 407      tgcaaccgtgggctctccgtggtcgatagctataagctgttgaa 450
                ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 26761931 tgcaatcgtggtctctctgtggtcgatagctataagctgttgaa 26761888
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>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative
             myb-related protein, putative farnesyl pyrophosphate
             synthase, and hypothetical protein genes, complete cds
          Length = 43422

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                         
Query: 307   gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
             |||||||||||||||||||||||||||||||||||| | |||||| |||||||  |||||
Sbjct: 31530 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 31589

                   
Query: 367   gatcga 372
             ||||||
Sbjct: 31590 gatcga 31595



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 407   tgcaaccgtgggctctccgtggtcgatagctataagctgttgaa 450
             ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 32345 tgcaatcgtggtctctctgtggtcgatagctataagctgttgaa 32388
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>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence
          Length = 1208

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                       
Query: 361 ccagtggatcgaccgcatgctggactacaatgtactgggaggaaaatgcaaccgtgggct 420
           ||||||||||||||||||| | |||||| || |||| ||||| || || |||||||||||
Sbjct: 21  ccagtggatcgaccgcatggttgactaccatttactcggaggcaagtgtaaccgtgggct 80

                                    
Query: 421 ctccgtggtcgatagctataagctg 445
           ||| |||||||| ||||| ||||||
Sbjct: 81  ctctgtggtcgacagctacaagctg 105
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                            
Query: 307      gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
                ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 29151721 gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 29151780

                          
Query: 367      gatcgaccgc 376
                ||||||||||
Sbjct: 29151781 gatcgaccgc 29151790
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>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0421H07
          Length = 158126

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                          
Query: 307    gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
              ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 112087 gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 112146

                        
Query: 367    gatcgaccgc 376
              ||||||||||
Sbjct: 112147 gatcgaccgc 112156
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>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl
            diphosphate synthase, complete cds
          Length = 7423

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                        
Query: 307  gctcaaggaggagctgctcagggaccccgccttcgactacaccgagtcgtcgcaccagtg 366
            ||||||||||||| |||||  |||||| |||||||| | ||||||   ||||| ||||||
Sbjct: 2024 gctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtg 2083

                      
Query: 367  gatcgaccgc 376
            ||||||||||
Sbjct: 2084 gatcgaccgc 2093
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 276     ccaaggcggcgttcgcgcggatc 298
               |||||||||||||||||||||||
Sbjct: 3297174 ccaaggcggcgttcgcgcggatc 3297196
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>gb|AF470318.1| Musa acuminata farnesyl pyrophosphare synthase (FPPS) mRNA,
           complete cds
          Length = 1269

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 365 tggatcgaccgcatgctggactacaatgtac 395
           ||||||||| | |||||||||||||||||||
Sbjct: 174 tggatcgacaggatgctggactacaatgtac 204
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>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
           dimethylallyltranstransferase/ geranyltranstransferase
           AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA,
           complete cds
          Length = 1291

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 413 cgtgggctctccgtggtcgatagctataagctgttgaa 450
           ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 208 cgtggtctctctgtggttgatagctacaagctgttgaa 245
to top
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
           dimethylallyltranstransferase/ geranyltranstransferase
           AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA,
           complete cds
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 atgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgtggtcgatagc 436
           ||||| |||||||||||||  ||||| ||    || ||||| ||||| ||||| ||||||
Sbjct: 159 atgcttgactacaatgtacgcggagggaagctaaatcgtggtctctctgtggttgatagc 218

                         
Query: 437 tataagctgttgaa 450
           || |||||||||||
Sbjct: 219 tacaagctgttgaa 232
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 288     tcgcgcggatctacgacgcgct 309
               ||||||||||||||||||||||
Sbjct: 1178413 tcgcgcggatctacgacgcgct 1178392
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 288     tcgcgcggatctacgacgcgct 309
               ||||||||||||||||||||||
Sbjct: 2337152 tcgcgcggatctacgacgcgct 2337173
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>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
          Length = 207674

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 413   cgtgggctctccgtggtcgatagctataagctgttgaa 450
             ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 15324 cgtggtctctctgtggttgatagctacaagctgttgaa 15287
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>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase
           FPS2 (At4g17190) mRNA, complete cds
          Length = 1060

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 atgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgtggtcgatagc 436
           ||||| |||||||||||||  ||||| ||    || ||||| ||||| ||||| ||||||
Sbjct: 112 atgcttgactacaatgtacgcggagggaagctaaatcgtggtctctctgtggttgatagc 171

                         
Query: 437 tataagctgttgaa 450
           || |||||||||||
Sbjct: 172 tacaagctgttgaa 185
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>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase
           FPS2 (At4g17190) mRNA, complete cds
          Length = 1292

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 atgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgtggtcgatagc 436
           ||||| |||||||||||||  ||||| ||    || ||||| ||||| ||||| ||||||
Sbjct: 158 atgcttgactacaatgtacgcggagggaagctaaatcgtggtctctctgtggttgatagc 217

                         
Query: 437 tataagctgttgaa 450
           || |||||||||||
Sbjct: 218 tacaagctgttgaa 231
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 288     tcgcgcggatctacgacgcgct 309
               ||||||||||||||||||||||
Sbjct: 2047457 tcgcgcggatctacgacgcgct 2047436
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>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
          Length = 198788

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 413  cgtgggctctccgtggtcgatagctataagctgttgaa 450
            ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 4689 cgtggtctctctgtggttgatagctacaagctgttgaa 4652
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>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 413    cgtgggctctccgtggtcgatagctataagctgttgaa 450
              ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 199237 cgtggtctctctgtggttgatagctacaagctgttgaa 199200
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>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1198

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 atgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgtggtcgatagc 436
           ||||| |||||||||||||  ||||| ||    || ||||| ||||| ||||| ||||||
Sbjct: 117 atgcttgactacaatgtacgcggagggaagctaaatcgtggtctctctgtggttgatagc 176

                         
Query: 437 tataagctgttgaa 450
           || |||||||||||
Sbjct: 177 tacaagctgttgaa 190
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>gb|L46350.2|ATHFPS2G Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) gene,
            complete cds
          Length = 4025

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 413  cgtgggctctccgtggtcgatagctataagctgttgaa 450
            ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 1687 cgtggtctctctgtggttgatagctacaagctgttgaa 1724
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 288     tcgcgcggatctacgacgcgct 309
               ||||||||||||||||||||||
Sbjct: 2704407 tcgcgcggatctacgacgcgct 2704386
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>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA,
           complete cds
          Length = 1266

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 atgctggactacaatgtactgggaggaaaatgcaaccgtgggctctccgtggtcgatagc 436
           ||||| |||||||||||||  ||||| ||    || ||||| ||||| ||||| ||||||
Sbjct: 158 atgcttgactacaatgtacgcggagggaagctaaatcgtggtctctctgtggttgatagc 217

                         
Query: 437 tataagctgttgaa 450
           || |||||||||||
Sbjct: 218 tacaagctgttgaa 231
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>ref|NM_184903.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 300  acgacgcgctcaaggaggagctgct 324
            |||||| ||||||||||||||||||
Sbjct: 2174 acgacgagctcaaggaggagctgct 2198
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>ref|NM_186849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 4   gcgccgagctcgacgccatcg 24
           |||||||||||||||||||||
Sbjct: 230 gcgccgagctcgacgccatcg 250
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>ref|XM_604169.2| PREDICTED: Bos taurus similar to malic enzyme 3, NADP(+)-dependent,
           mitochondrial (LOC525813), mRNA
          Length = 1695

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 gaggagctgctcagggacccc 334
           |||||||||||||||||||||
Sbjct: 517 gaggagctgctcagggacccc 537
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 300      acgacgcgctcaaggaggagctgct 324
                |||||| ||||||||||||||||||
Sbjct: 31847266 acgacgagctcaaggaggagctgct 31847242
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 4       gcgccgagctcgacgccatcg 24
               |||||||||||||||||||||
Sbjct: 8369775 gcgccgagctcgacgccatcg 8369755
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 300      acgacgcgctcaaggaggagctgct 324
                |||||| ||||||||||||||||||
Sbjct: 31937782 acgacgagctcaaggaggagctgct 31937758
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0021G06
          Length = 137678

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     gcgccgagctcgacgccatcg 24
             |||||||||||||||||||||
Sbjct: 74873 gcgccgagctcgacgccatcg 74853
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>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0056I06
          Length = 138653

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 4    gcgccgagctcgacgccatcg 24
            |||||||||||||||||||||
Sbjct: 1368 gcgccgagctcgacgccatcg 1348
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>dbj|AK107354.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H10, full
            insert sequence
          Length = 2561

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 300  acgacgcgctcaaggaggagctgct 324
            |||||| ||||||||||||||||||
Sbjct: 2194 acgacgagctcaaggaggagctgct 2218
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>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence
          Length = 197585

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 431   gatagctataagctgttgaaa 451
             |||||||||||||||||||||
Sbjct: 33848 gatagctataagctgttgaaa 33828
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>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence
          Length = 228741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 431   gatagctataagctgttgaaa 451
             |||||||||||||||||||||
Sbjct: 26808 gatagctataagctgttgaaa 26788
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>emb|AJ970535.1| Triticum turgidum subsp. durum partial mRNA for heat shock protein
           101 (hsp101c-A gene)
          Length = 1881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 289 cgcgcggatctacgacgcgctcaaggagg 317
           ||||| ||||| |||||||||||||||||
Sbjct: 346 cgcgcagatctccgacgcgctcaaggagg 374
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>gb|U15777.1|LAU15777 Lupinus albus farnesyl pyrophosphate synthase (fps1) mRNA, complete
           cds
          Length = 1304

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 369 tcgaccgcatgctggactacaatgt 393
           ||||||| |||||||||||||||||
Sbjct: 176 tcgaccggatgctggactacaatgt 200
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>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
             sequence
          Length = 150663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 300   acgacgcgctcaaggaggagctgct 324
             |||||| ||||||||||||||||||
Sbjct: 48519 acgacgagctcaaggaggagctgct 48495
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>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence
          Length = 243701

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   atctctccatccccagtttc 208
             ||||||||||||||||||||
Sbjct: 39485 atctctccatccccagtttc 39466
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>gb|BC094564.1| Mus musculus mitogen-activated protein kinase 4, mRNA (cDNA clone
            IMAGE:6839524)
          Length = 4862

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1920 caaggaggagctgctcaggg 1939
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>gb|AC126042.3| Mus musculus BAC clone RP24-303J10 from chromosome 18, complete
             sequence
          Length = 173064

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   caaggaggagctgctcaggg 329
             ||||||||||||||||||||
Sbjct: 18723 caaggaggagctgctcaggg 18704
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>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete
             sequence
          Length = 169912

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   caaggaggagctgctcaggg 329
             ||||||||||||||||||||
Sbjct: 45459 caaggaggagctgctcaggg 45478
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>gb|AY281353.1| Uncultured Acidobacteria bacterium clone 32d1 genomic sequence
          Length = 35153

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     cgagctcgacgccatcgcga 27
             ||||||||||||||||||||
Sbjct: 16080 cgagctcgacgccatcgcga 16061
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>gb|BC062911.1| Mus musculus mitogen-activated protein kinase 4, mRNA (cDNA clone
            MGC:73474 IMAGE:6821544), complete cds
          Length = 4064

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1109 caaggaggagctgctcaggg 1128
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>gb|BC058942.1| Mus musculus mitogen-activated protein kinase 4, mRNA (cDNA clone
            MGC:66565 IMAGE:6821544), complete cds
          Length = 4064

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1109 caaggaggagctgctcaggg 1128
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    acgacgcgctcaaggaggagctgc 323
              ||||||||||||||| ||||||||
Sbjct: 240021 acgacgcgctcaaggcggagctgc 239998
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>emb|Z21935.1|RNPROKINA R.norvegicus protein kinase rMNK2
          Length = 822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 caaggaggagctgctcaggg 329
           ||||||||||||||||||||
Sbjct: 678 caaggaggagctgctcaggg 697
to top
>gb|BC091275.1| Rattus norvegicus keratin complex 1, acidic, gene 18, mRNA (cDNA
           clone MGC:109143 IMAGE:7383311), complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcgctcaaggaggagctgct 324
           ||||||||||||||||||||
Sbjct: 632 gcgctcaaggaggagctgct 651
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>ref|NM_053976.1| Rattus norvegicus keratin complex 1, acidic, gene 18 (Krt1-18),
           mRNA
          Length = 1397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcgctcaaggaggagctgct 324
           ||||||||||||||||||||
Sbjct: 632 gcgctcaaggaggagctgct 651
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      gctcgacgccatcgcgatct 30
               ||||||||||||||||||||
Sbjct: 3661016 gctcgacgccatcgcgatct 3660997
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>ref|NM_172632.2| Mus musculus mitogen-activated protein kinase 4 (Mapk4), mRNA
          Length = 4660

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1706 caaggaggagctgctcaggg 1725
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>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence
          Length = 201330

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 399    gaggaaaatgcaaccgtgggctct 422
              |||| |||||||||||||||||||
Sbjct: 174986 gaggcaaatgcaaccgtgggctct 174963
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 400     aggaaaatgcaaccgtgggc 419
               ||||||||||||||||||||
Sbjct: 2945210 aggaaaatgcaaccgtgggc 2945191
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>gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosome 5, complete sequence
          Length = 204014

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   gaggaaaatgcaaccgtgggctct 422
             |||| |||||||||||||||||||
Sbjct: 89798 gaggcaaatgcaaccgtgggctct 89775
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>gb|AC006615.1| Caenorhabditis elegans cosmid C36B7, complete sequence
          Length = 43491

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   cgcatgctggactacaatgt 393
             ||||||||||||||||||||
Sbjct: 22051 cgcatgctggactacaatgt 22070
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>dbj|AK079654.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330097D03 product:MITOGEN-ACTIVATED
            PROTEIN KINASE 4 (EC 2.7.1.-) (EXTRACELLULAR SIGNAL-
            REGULATED KINASE 4) (ERK-4) (MAP KINASE ISOFORM P63)
            (P63-MAPK) homolog [Homo sapiens], full insert sequence
          Length = 4589

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1684 caaggaggagctgctcaggg 1703
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>ref|NM_076797.1| Caenorhabditis elegans C36B7.2 (C36B7.2) mRNA, complete cds
          Length = 1596

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 cgcatgctggactacaatgt 393
           ||||||||||||||||||||
Sbjct: 766 cgcatgctggactacaatgt 785
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>ref|XM_225726.3| PREDICTED: Rattus norvegicus mitogen-activated protein kinase 4
            (Mapk4), mRNA
          Length = 2907

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  caaggaggagctgctcaggg 329
            ||||||||||||||||||||
Sbjct: 1911 caaggaggagctgctcaggg 1930
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>gb|AC154475.2| Mus musculus BAC clone RP24-130B12 from 17, complete sequence
          Length = 117680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   atctctccatccccagtttc 208
             ||||||||||||||||||||
Sbjct: 92257 atctctccatccccagtttc 92238
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>gb|AF140062.1|AF140062 Phanerochaete chrysosporium lignin peroxidase (lipJ) gene, complete
           sequence
          Length = 1591

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  cgacgccatcgcgatctctc 33
           ||||||||||||||||||||
Sbjct: 329 cgacgccatcgcgatctctc 348
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>emb|X81448.1|RNKER18 R.norvegicus mRNA for keratin 18
          Length = 443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcgctcaaggaggagctgct 324
           ||||||||||||||||||||
Sbjct: 224 gcgctcaaggaggagctgct 243
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 300     acgacgcgctcaaggaggagctgc 323
               |||||||||||||||||| |||||
Sbjct: 1006529 acgacgcgctcaaggaggtgctgc 1006552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,926,852
Number of Sequences: 3902068
Number of extensions: 1926852
Number of successful extensions: 39190
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38501
Number of HSP's gapped (non-prelim): 688
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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