Clone Information

BLAST Search Result

Clone Name	bast55a07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_507338.1\| PREDICTED Oryza sativa (japonica cultivar-group...	264	2e-67
2	ref\|XM_483778.1\| Oryza sativa (japonica cultivar-group), mRNA	264	2e-67
3	dbj\|AK101389.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	264	2e-67
4	dbj\|AK119519.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	256	6e-65
5	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	117	3e-23
6	dbj\|AP005524.3\| Oryza sativa (japonica cultivar-group) genomic D...	117	3e-23
7	dbj\|AP005544.3\| Oryza sativa (japonica cultivar-group) genomic D...	117	3e-23
8	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	52	0.002
9	gb\|AC097279.5\| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom...	52	0.002
10	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
11	dbj\|AK119753.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.002
12	ref\|XM_537688.2\| PREDICTED: Canis familiaris similar to serine c...	50	0.007
13	ref\|XM_470836.1\| Oryza sativa (japonica cultivar-group), mRNA	48	0.026
14	ref\|XM_875922.1\| PREDICTED: Bos taurus similar to serine carboxy...	48	0.026
15	ref\|XM_865361.1\| PREDICTED: Bos taurus similar to serine carboxy...	48	0.026
16	ref\|XM_581279.2\| PREDICTED: Bos taurus similar to serine carboxy...	48	0.026
17	gb\|AY448014.1\|AY448010S5 Ipomoea trifida haplotype S1 self-incom...	48	0.026
18	gb\|BC111297.1\| Bos taurus similar to serine carboxypeptidase 1 p...	48	0.026
19	dbj\|AK101332.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.026
20	gb\|AE009094.1\| Agrobacterium tumefaciens str. C58 circular chrom...	44	0.41
21	gb\|AE007869.1\| Agrobacterium tumefaciens str. C58, complete genome	44	0.41
22	dbj\|AK058801.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.41
23	ref\|XM_470825.1\| Oryza sativa (japonica cultivar-group), mRNA	42	1.6
24	gb\|AE016822.1\| Leifsonia xyli subsp. xyli str. CTCB07, complete ...	42	1.6
25	gb\|AC099323.6\| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genom...	42	1.6
26	dbj\|BA000012.4\| Mesorhizobium loti MAFF303099 DNA, complete genome	42	1.6
27	dbj\|AP002054.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	42	1.6
28	dbj\|AK103605.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.6
29	gb\|AY451394.1\| Mus musculus acetyl-CoA carboxylase 2 (Acacb) mRN...	40	6.4
30	gb\|AC122282.5\| Mus musculus BAC clone RP23-240B12 from chromosom...	40	6.4
31	gb\|AC004514.1\|HUAC004514 Homo sapiens Chromosome 16 BAC clone CI...	40	6.4
32	ref\|XM_797295.1\| Trypanosoma cruzi strain CL Brener mucin-associ...	40	6.4
33	gb\|BC057146.1\| Mus musculus ferredoxin reductase, mRNA (cDNA clo...	40	6.4
34	emb\|AJ002369.1\|AODPPIV Aspergillus oryzae dppIV gene	40	6.4
35	gb\|AC119049.1\| Homo sapiens chromosome 16 clone CTA-464C10, comp...	40	6.4
36	dbj\|AP007157.1\| Aspergillus oryzae RIB40 genomic DNA, SC023	40	6.4
37	dbj\|AK147463.1\| Mus musculus 14 days pregnant adult female place...	40	6.4
38	gb\|AC040159.4\|AC040159 Homo sapiens chromosome 16 clone CTC-253B...	40	6.4
39	gb\|AC040174.5\| Homo sapiens chromosome 16 clone RP11-96H17, comp...	40	6.4
40	dbj\|BS000050.1\| Pan troglodytes chromosome 22 clone:RP43-038C12,...	40	6.4
41	gb\|BC071268.1\| Mus musculus ferredoxin reductase, mRNA (cDNA clo...	40	6.4
42	ref\|NM_133904.1\| Mus musculus acetyl-Coenzyme A carboxylase beta...	40	6.4

>ref|XM_507338.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.41 mRNA
          Length = 1747

 Score =  264 bits (133), Expect = 2e-67
 Identities = 388/473 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagctccaaggcgacgagggaaggcggtctcgacggcctcatgaacgccgaggtcaagg 60
            ||||||||||||  || | |||||||||  |||| ||| |||||||| |||   ||| ||
Sbjct: 1021 tgagctccaaggtcacaacggaaggcggcttcgagggcatcatgaacaccgtcatcaggg 1080

                                                                        
Query: 61   ccaagctcggcatcatccccaacaacttcacctggggagagcagtcgggcgacgtcttcc 120
              |||||| | ||||| ||||| ||| |||||||| | |||||||| | ||| || ||| 
Sbjct: 1081 ataagctccggatcatacccaaaaacgtcacctggagcgagcagtcagacgatgtgttcg 1140

                                                                        
Query: 121  aagccctcgcaggcgacttcatgaagccaagaatcaacgaggttgacgagctcctcaaat 180
            |||| || ||||| ||||||||||| || ||||||   ||||| |||||||| |||||  
Sbjct: 1141 aagctcttgcaggagacttcatgaaacccagaatccttgaggtcgacgagcttctcaacc 1200

                                                                        
Query: 181  ttggagtggaagtgaccatatacagcggacagctcgatctcatctgcgcaaccaagggaa 240
            ||||  |  | || || || || ||||||||||| ||||| ||||| || ||||||||||
Sbjct: 1201 ttggcctcaacgtcacaatctatagcggacagcttgatctgatctgtgcgaccaagggaa 1260

                                                                        
Query: 241  cactggactgggtccagaagctcaagtgggaaggccttaagaacttcacagactcgccca 300
            || |||| ||| | ||||| ||||||||||| || || |||||||||||| |||| | ||
Sbjct: 1261 cattggattggattcagaaactcaagtgggatggtctgaagaacttcacaaactcacgca 1320

                                                                        
Query: 301  gaaagccgctctactgcaaggcgggtgaagcagccggcacccaggcctttctcaagtcgt 360
            ||  ||||||||||||||  |  ||||||||||| |||||||| ||||| ||||| || |
Sbjct: 1321 gagtgccgctctactgcagtggtggtgaagcagctggcacccaagccttcctcaaatctt 1380

                                                                        
Query: 361  acaagaacctgaaattctactggatactcggagctggccacatgataccgatcgacaacc 420
            ||||||| || ||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct: 1381 acaagaatctcaaattctactggatactgggagctggccacatggtaccaatagacaacc 1440

                                                                 
Query: 421  cttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
            ||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 1441 cttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 1493

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>ref|XM_483778.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1744

 Score =  264 bits (133), Expect = 2e-67
 Identities = 388/473 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagctccaaggcgacgagggaaggcggtctcgacggcctcatgaacgccgaggtcaagg 60
            ||||||||||||  || | |||||||||  |||| ||| |||||||| |||   ||| ||
Sbjct: 1028 tgagctccaaggtcacaacggaaggcggcttcgagggcatcatgaacaccgtcatcaggg 1087

                                                                        
Query: 61   ccaagctcggcatcatccccaacaacttcacctggggagagcagtcgggcgacgtcttcc 120
              |||||| | ||||| ||||| ||| |||||||| | |||||||| | ||| || ||| 
Sbjct: 1088 ataagctccggatcatacccaaaaacgtcacctggagcgagcagtcagacgatgtgttcg 1147

                                                                        
Query: 121  aagccctcgcaggcgacttcatgaagccaagaatcaacgaggttgacgagctcctcaaat 180
            |||| || ||||| ||||||||||| || ||||||   ||||| |||||||| |||||  
Sbjct: 1148 aagctcttgcaggagacttcatgaaacccagaatccttgaggtcgacgagcttctcaacc 1207

                                                                        
Query: 181  ttggagtggaagtgaccatatacagcggacagctcgatctcatctgcgcaaccaagggaa 240
            ||||  |  | || || || || ||||||||||| ||||| ||||| || ||||||||||
Sbjct: 1208 ttggcctcaacgtcacaatctatagcggacagcttgatctgatctgtgcgaccaagggaa 1267

                                                                        
Query: 241  cactggactgggtccagaagctcaagtgggaaggccttaagaacttcacagactcgccca 300
            || |||| ||| | ||||| ||||||||||| || || |||||||||||| |||| | ||
Sbjct: 1268 cattggattggattcagaaactcaagtgggatggtctgaagaacttcacaaactcacgca 1327

                                                                        
Query: 301  gaaagccgctctactgcaaggcgggtgaagcagccggcacccaggcctttctcaagtcgt 360
            ||  ||||||||||||||  |  ||||||||||| |||||||| ||||| ||||| || |
Sbjct: 1328 gagtgccgctctactgcagtggtggtgaagcagctggcacccaagccttcctcaaatctt 1387

                                                                        
Query: 361  acaagaacctgaaattctactggatactcggagctggccacatgataccgatcgacaacc 420
            ||||||| || ||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct: 1388 acaagaatctcaaattctactggatactgggagctggccacatggtaccaatagacaacc 1447

                                                                 
Query: 421  cttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
            ||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 1448 cttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 1500

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>dbj|AK101389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036J23, full
            insert sequence
          Length = 1744

 Score =  264 bits (133), Expect = 2e-67
 Identities = 388/473 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagctccaaggcgacgagggaaggcggtctcgacggcctcatgaacgccgaggtcaagg 60
            ||||||||||||  || | |||||||||  |||| ||| |||||||| |||   ||| ||
Sbjct: 1028 tgagctccaaggtcacaacggaaggcggcttcgagggcatcatgaacaccgtcatcaggg 1087

                                                                        
Query: 61   ccaagctcggcatcatccccaacaacttcacctggggagagcagtcgggcgacgtcttcc 120
              |||||| | ||||| ||||| ||| |||||||| | |||||||| | ||| || ||| 
Sbjct: 1088 ataagctccggatcatacccaaaaacgtcacctggagcgagcagtcagacgatgtgttcg 1147

                                                                        
Query: 121  aagccctcgcaggcgacttcatgaagccaagaatcaacgaggttgacgagctcctcaaat 180
            |||| || ||||| ||||||||||| || ||||||   ||||| |||||||| |||||  
Sbjct: 1148 aagctcttgcaggagacttcatgaaacccagaatccttgaggtcgacgagcttctcaacc 1207

                                                                        
Query: 181  ttggagtggaagtgaccatatacagcggacagctcgatctcatctgcgcaaccaagggaa 240
            ||||  |  | || || || || ||||||||||| ||||| ||||| || ||||||||||
Sbjct: 1208 ttggcctcaacgtcacaatctatagcggacagcttgatctgatctgtgcgaccaagggaa 1267

                                                                        
Query: 241  cactggactgggtccagaagctcaagtgggaaggccttaagaacttcacagactcgccca 300
            || |||| ||| | ||||| ||||||||||| || || |||||||||||| |||| | ||
Sbjct: 1268 cattggattggattcagaaactcaagtgggatggtctgaagaacttcacaaactcacgca 1327

                                                                        
Query: 301  gaaagccgctctactgcaaggcgggtgaagcagccggcacccaggcctttctcaagtcgt 360
            ||  ||||||||||||||  |  ||||||||||| |||||||| ||||| ||||| || |
Sbjct: 1328 gagtgccgctctactgcagtggtggtgaagcagctggcacccaagccttcctcaaatctt 1387

                                                                        
Query: 361  acaagaacctgaaattctactggatactcggagctggccacatgataccgatcgacaacc 420
            ||||||| || ||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct: 1388 acaagaatctcaaattctactggatactgggagctggccacatggtaccaatagacaacc 1447

                                                                 
Query: 421  cttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
            ||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 1448 cttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 1500

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>dbj|AK119519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C12, full
            insert sequence
          Length = 1747

 Score =  256 bits (129), Expect = 6e-65
 Identities = 387/473 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagctccaaggcgacgagggaaggcggtctcgacggcctcatgaacgccgaggtcaagg 60
            ||||||||||||  || | |||||||||  |||| ||| |||||||| |||   ||| ||
Sbjct: 1021 tgagctccaaggtcacaacggaaggcggcttcgagggcatcatgaacaccgtcatcaggg 1080

                                                                        
Query: 61   ccaagctcggcatcatccccaacaacttcacctggggagagcagtcgggcgacgtcttcc 120
              |||||| | ||||| ||||| ||| |||||||| | |||||||| | ||| || ||| 
Sbjct: 1081 ataagctccggatcatacccaaaaacgtcacctggagcgagcagtcagacgatgtgttcg 1140

                                                                        
Query: 121  aagccctcgcaggcgacttcatgaagccaagaatcaacgaggttgacgagctcctcaaat 180
            |||| || ||||| ||||||||||| || ||||||   ||||| |||||||| |||||  
Sbjct: 1141 aagctcttgcaggagacttcatgaaacccagaatccttgaggtcgacgagcttctcaacc 1200

                                                                        
Query: 181  ttggagtggaagtgaccatatacagcggacagctcgatctcatctgcgcaaccaagggaa 240
            ||||  |  | || || || || ||||||||||| ||||| ||||| || |||||||| |
Sbjct: 1201 ttggcctcaacgtcacaatctatagcggacagcttgatctgatctgtgcgaccaagggta 1260

                                                                        
Query: 241  cactggactgggtccagaagctcaagtgggaaggccttaagaacttcacagactcgccca 300
            || |||| ||| | ||||| ||||||||||| || || |||||||||||| |||| | ||
Sbjct: 1261 cattggattggattcagaaactcaagtgggatggtctgaagaacttcacaaactcacgca 1320

                                                                        
Query: 301  gaaagccgctctactgcaaggcgggtgaagcagccggcacccaggcctttctcaagtcgt 360
            ||  ||||||||||||||  |  ||||||||||| |||||||| ||||| ||||| || |
Sbjct: 1321 gagtgccgctctactgcagtggtggtgaagcagctggcacccaagccttcctcaaatctt 1380

                                                                        
Query: 361  acaagaacctgaaattctactggatactcggagctggccacatgataccgatcgacaacc 420
            ||||||| || ||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct: 1381 acaagaatctcaaattctactggatactgggagctggccacatggtaccaatagacaacc 1440

                                                                 
Query: 421  cttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
            ||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 1441 cttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 1493

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  117 bits (59), Expect = 3e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                            
Query: 266      gtgggaaggccttaagaacttcacagactcgcccagaaagccgctctactgcaaggcggg 325
                |||||| || || |||||||||||| |||| | ||||  ||||||||||||||  |  ||
Sbjct: 28066477 gtgggatggtctgaagaacttcacaaactcacgcagagtgccgctctactgcagtggtgg 28066536

                                                                            
Query: 326      tgaagcagccggcacccaggcctttctcaagtcgtacaagaacctgaaattctactggat 385
                ||||||||| |||||||| ||||| ||||| || |||||||| || ||||||||||||||
Sbjct: 28066537 tgaagcagctggcacccaagccttcctcaaatcttacaagaatctcaaattctactggat 28066596

                                   
Query: 386      actcggagctggccacatg 404
                ||| |||||||||||||||
Sbjct: 28066597 actgggagctggccacatg 28066615



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 414      gacaacccttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
                |||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 28067065 gacaacccttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 28067124



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 210      cagctcgatctcatctgcgcaaccaagggaacactggactgggtccagaagctcaagt 267
                ||||| ||||| ||||| || |||||||||||| |||| ||| | ||||| |||||||
Sbjct: 28066299 cagcttgatctgatctgtgcgaccaagggaacattggattggattcagaaactcaagt 28066356



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                            
Query: 99       gagcagtcgggcgacgtcttccaagccctcgcaggcgacttcatgaagccaagaatcaac 158
                |||||||| | ||| || ||| |||| || ||||| ||||||||||| || ||||||   
Sbjct: 28065328 gagcagtcagacgatgtgttcgaagctcttgcaggagacttcatgaaacccagaatcctt 28065387

                                    
Query: 159      gaggttgacgagctcctcaa 178
                ||||| |||||||| |||||
Sbjct: 28065388 gaggtcgacgagcttctcaa 28065407

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>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0562A06
          Length = 154198

 Score =  117 bits (59), Expect = 3e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                          
Query: 266    gtgggaaggccttaagaacttcacagactcgcccagaaagccgctctactgcaaggcggg 325
              |||||| || || |||||||||||| |||| | ||||  ||||||||||||||  |  ||
Sbjct: 143969 gtgggatggtctgaagaacttcacaaactcacgcagagtgccgctctactgcagtggtgg 144028

                                                                          
Query: 326    tgaagcagccggcacccaggcctttctcaagtcgtacaagaacctgaaattctactggat 385
              ||||||||| |||||||| ||||| ||||| || |||||||| || ||||||||||||||
Sbjct: 144029 tgaagcagctggcacccaagccttcctcaaatcttacaagaatctcaaattctactggat 144088

                                 
Query: 386    actcggagctggccacatg 404
              ||| |||||||||||||||
Sbjct: 144089 actgggagctggccacatg 144107



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 414    gacaacccttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
              |||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 144557 gacaacccttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 144616



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                        
Query: 210    cagctcgatctcatctgcgcaaccaagggaacactggactgggtccagaagctcaagt 267
              ||||| ||||| ||||| || |||||||||||| |||| ||| | ||||| |||||||
Sbjct: 143791 cagcttgatctgatctgtgcgaccaagggaacattggattggattcagaaactcaagt 143848



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                          
Query: 99     gagcagtcgggcgacgtcttccaagccctcgcaggcgacttcatgaagccaagaatcaac 158
              |||||||| | ||| || ||| |||| || ||||| ||||||||||| || ||||||   
Sbjct: 142820 gagcagtcagacgatgtgttcgaagctcttgcaggagacttcatgaaacccagaatcctt 142879

                                  
Query: 159    gaggttgacgagctcctcaa 178
              ||||| |||||||| |||||
Sbjct: 142880 gaggtcgacgagcttctcaa 142899

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>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0604E01
          Length = 159049

 Score =  117 bits (59), Expect = 3e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                         
Query: 266   gtgggaaggccttaagaacttcacagactcgcccagaaagccgctctactgcaaggcggg 325
             |||||| || || |||||||||||| |||| | ||||  ||||||||||||||  |  ||
Sbjct: 63972 gtgggatggtctgaagaacttcacaaactcacgcagagtgccgctctactgcagtggtgg 64031

                                                                         
Query: 326   tgaagcagccggcacccaggcctttctcaagtcgtacaagaacctgaaattctactggat 385
             ||||||||| |||||||| ||||| ||||| || |||||||| || ||||||||||||||
Sbjct: 64032 tgaagcagctggcacccaagccttcctcaaatcttacaagaatctcaaattctactggat 64091

                                
Query: 386   actcggagctggccacatg 404
             ||| |||||||||||||||
Sbjct: 64092 actgggagctggccacatg 64110



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 414   gacaacccttgccctgcactcaagatgctgggtgacattacacattctcctgctcggtag 473
             |||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||
Sbjct: 64560 gacaacccttgccctgcattgaagatgcttggtgacattacacaatctcctgctcagtag 64619



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 210   cagctcgatctcatctgcgcaaccaagggaacactggactgggtccagaagctcaagt 267
             ||||| ||||| ||||| || |||||||||||| |||| ||| | ||||| |||||||
Sbjct: 63794 cagcttgatctgatctgtgcgaccaagggaacattggattggattcagaaactcaagt 63851



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 99    gagcagtcgggcgacgtcttccaagccctcgcaggcgacttcatgaagccaagaatcaac 158
             |||||||| | ||| || ||| |||| || ||||| ||||||||||| || ||||||   
Sbjct: 62823 gagcagtcagacgatgtgttcgaagctcttgcaggagacttcatgaaacccagaatcctt 62882

                                 
Query: 159   gaggttgacgagctcctcaa 178
             ||||| |||||||| |||||
Sbjct: 62883 gaggtcgacgagcttctcaa 62902

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 138      ttcatgaagccaagaatcaacgaggt 163
                ||||||||||||||||||||||||||
Sbjct: 15664279 ttcatgaagccaagaatcaacgaggt 15664254



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 360      tacaagaacctgaaattctactggatactcggagctgg 397
                |||||||||||| | |||||||||||||| || |||||
Sbjct: 15662969 tacaagaacctgcatttctactggatacttggggctgg 15662932



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 360      tacaagaacctgaaattctactggatactcggagctggcca 400
                ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 15602145 tacaaaaacctgcatttctactggatccttggagctggcca 15602105

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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
             sequence
          Length = 178748

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 138   ttcatgaagccaagaatcaacgaggt 163
             ||||||||||||||||||||||||||
Sbjct: 74233 ttcatgaagccaagaatcaacgaggt 74208



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 360   tacaagaacctgaaattctactggatactcggagctgg 397
             |||||||||||| | |||||||||||||| || |||||
Sbjct: 72923 tacaagaacctgcatttctactggatacttggggctgg 72886



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 360   tacaagaacctgaaattctactggatactcggagctggcca 400
             ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 12099 tacaaaaacctgcatttctactggatccttggagctggcca 12059

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 138      ttcatgaagccaagaatcaacgaggt 163
                ||||||||||||||||||||||||||
Sbjct: 15658813 ttcatgaagccaagaatcaacgaggt 15658788



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 360      tacaagaacctgaaattctactggatactcggagctgg 397
                |||||||||||| | |||||||||||||| || |||||
Sbjct: 15657503 tacaagaacctgcatttctactggatacttggggctgg 15657466



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 360      tacaagaacctgaaattctactggatactcggagctggcca 400
                ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 15596679 tacaaaaacctgcatttctactggatccttggagctggcca 15596639

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>dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-E02, full
            insert sequence
          Length = 2362

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 138  ttcatgaagccaagaatcaacgaggt 163
            ||||||||||||||||||||||||||
Sbjct: 1368 ttcatgaagccaagaatcaacgaggt 1393



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 360  tacaagaacctgaaattctactggatactcggagctgg 397
            |||||||||||| | |||||||||||||| || |||||
Sbjct: 1683 tacaagaacctgcatttctactggatacttggggctgg 1720

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>ref|XM_537688.2| PREDICTED: Canis familiaris similar to serine carboxypeptidase 1
            precursor protein (LOC480566), mRNA
          Length = 1958

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 352  tcaagtcgtacaagaacctgaaattctactggatactcggagctggccacatg 404
            ||||||| ||||||||||||   ||||||||||| ||| ||||||| ||||||
Sbjct: 1319 tcaagtcctacaagaacctggctttctactggatcctcagagctgggcacatg 1371

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>ref|XM_470836.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1854

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 138  ttcatgaagccaagaatcaacgag 161
            ||||||||||||||||||||||||
Sbjct: 1084 ttcatgaagccaagaatcaacgag 1107

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>ref|XM_875922.1| PREDICTED: Bos taurus similar to serine carboxypeptidase 1 precursor
            protein, transcript variant 3 (LOC505054), mRNA
          Length = 1927

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 345  gcctttctcaagtcgtacaagaacctgaaattctactggatactcggagctggccacatg 404
            |||||| ||||||| |||||||| |||   ||||||||||| ||| ||||||| ||||||
Sbjct: 1267 gcctttgtcaagtcctacaagaatctggctttctactggattctcagagctggacacatg 1326

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>ref|XM_865361.1| PREDICTED: Bos taurus similar to serine carboxypeptidase 1 precursor
            protein, transcript variant 2 (LOC505054), mRNA
          Length = 1924

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 345  gcctttctcaagtcgtacaagaacctgaaattctactggatactcggagctggccacatg 404
            |||||| ||||||| |||||||| |||   ||||||||||| ||| ||||||| ||||||
Sbjct: 1264 gcctttgtcaagtcctacaagaatctggctttctactggattctcagagctggacacatg 1323

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>ref|XM_581279.2| PREDICTED: Bos taurus similar to serine carboxypeptidase 1
           precursor protein, transcript variant 1 (LOC505054),
           mRNA
          Length = 1382

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 345 gcctttctcaagtcgtacaagaacctgaaattctactggatactcggagctggccacatg 404
           |||||| ||||||| |||||||| |||   ||||||||||| ||| ||||||| ||||||
Sbjct: 722 gcctttgtcaagtcctacaagaatctggctttctactggattctcagagctggacacatg 781

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>gb|AY448014.1|AY448010S5 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus,
           contig SR5
          Length = 7191

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 354 aagtcgtacaagaacctgaaattctactggatactcggagctgg 397
           ||||| |||||||||||| | ||||||||||| || ||||||||
Sbjct: 277 aagtcatacaagaacctgcatttctactggattcttggagctgg 234

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>gb|BC111297.1| Bos taurus similar to serine carboxypeptidase 1 precursor protein,
            transcript variant 2, mRNA (cDNA clone MGC:133818
            IMAGE:8064139), complete cds
          Length = 1913

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 345  gcctttctcaagtcgtacaagaacctgaaattctactggatactcggagctggccacatg 404
            |||||| ||||||| |||||||| |||   ||||||||||| ||| ||||||| ||||||
Sbjct: 1233 gcctttgtcaagtcctacaagaatctggctttctactggattctcagagctggacacatg 1292

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>dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034H21, full
            insert sequence
          Length = 1555

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 138  ttcatgaagccaagaatcaacgag 161
            ||||||||||||||||||||||||
Sbjct: 1122 ttcatgaagccaagaatcaacgag 1145



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 360  tacaagaacctgaaattctactggatactcggagctgg 397
            |||||||||||| | |||||||||||||| || |||||
Sbjct: 1338 tacaagaacctgcatttctactggatacttggggctgg 1375

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>gb|AE009094.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 120
            of 256 of the complete sequence
          Length = 10902

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 53   ggtcaaggccaagctcggcatc 74
            ||||||||||||||||||||||
Sbjct: 2669 ggtcaaggccaagctcggcatc 2690

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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 53      ggtcaaggccaagctcggcatc 74
               ||||||||||||||||||||||
Sbjct: 1313723 ggtcaaggccaagctcggcatc 1313744

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>dbj|AK058801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A09, full
           insert sequence
          Length = 527

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 360 tacaagaacctgaaattctactggatactcggagctgg 397
           |||||||||||| | |||||||||||||| || |||||
Sbjct: 310 tacaagaacctgcatttctactggatacttggggctgg 347

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>ref|XM_470825.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 360  tacaagaacctgaaattctactggatactcggagctggcca 400
            ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 1298 tacaaaaacctgcatttctactggatccttggagctggcca 1338

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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 21      gaaggcggtctcgacggcctc 41
               |||||||||||||||||||||
Sbjct: 1239000 gaaggcggtctcgacggcctc 1239020

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>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete
              sequence
          Length = 115079

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 360    tacaagaacctgaaattctactggatactcggagctggcca 400
              ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 101696 tacaaaaacctgcatttctactggatccttggagctggcca 101656

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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     gtcaaggccaagctcggcatc 74
              |||||||||||||||||||||
Sbjct: 132011 gtcaaggccaagctcggcatc 132031

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>dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T15D2
          Length = 87219

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   gagctcctcaaatttggagtggaag 192
             ||||| |||||||||||||||||||
Sbjct: 12587 gagctactcaaatttggagtggaag 12611

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>dbj|AK103605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133H04, full
            insert sequence
          Length = 1600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 360  tacaagaacctgaaattctactggatactcggagctggcca 400
            ||||| |||||| | ||||||||||| || |||||||||||
Sbjct: 1300 tacaaaaacctgcatttctactggatccttggagctggcca 1340

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>gb|AY451394.1| Mus musculus acetyl-CoA carboxylase 2 (Acacb) mRNA, complete cds
          Length = 7461

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  ggactgggtccagaagctca 264
            ||||||||||||||||||||
Sbjct: 3036 ggactgggtccagaagctca 3055

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>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence
          Length = 227388

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ggactgggtccagaagctca 264
             ||||||||||||||||||||
Sbjct: 84412 ggactgggtccagaagctca 84431

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>gb|AC004514.1|HUAC004514 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-954B10, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    agtgggaaggccttaagaac 284
              ||||||||||||||||||||
Sbjct: 102192 agtgggaaggccttaagaac 102211

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>ref|XM_797295.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053448661.10) partial mRNA
          Length = 485

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 71  catcatccccaacaacttcacctg 94
           ||||||| ||||||||||||||||
Sbjct: 259 catcatctccaacaacttcacctg 236

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>gb|BC057146.1| Mus musculus ferredoxin reductase, mRNA (cDNA clone IMAGE:5328572),
            partial cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 61   ccaagctcggcatcatccccaaca 84
            |||||||||| |||||||||||||
Sbjct: 1149 ccaagctcggaatcatccccaaca 1172

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>emb|AJ002369.1|AODPPIV Aspergillus oryzae dppIV gene
          Length = 4771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 ctactgcaaggcgggtgaag 330
           ||||||||||||||||||||
Sbjct: 66  ctactgcaaggcgggtgaag 47

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>gb|AC119049.1| Homo sapiens chromosome 16 clone CTA-464C10, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    agtgggaaggccttaagaac 284
              ||||||||||||||||||||
Sbjct: 102192 agtgggaaggccttaagaac 102211

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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     ctactgcaaggcgggtgaag 330
               ||||||||||||||||||||
Sbjct: 1589559 ctactgcaaggcgggtgaag 1589578

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>dbj|AK147463.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:M5C1047P08
            product:acetyl-Coenzyme A carboxylase beta, full insert
            sequence
          Length = 6681

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  ggactgggtccagaagctca 264
            ||||||||||||||||||||
Sbjct: 1231 ggactgggtccagaagctca 1250

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>gb|AC040159.4|AC040159 Homo sapiens chromosome 16 clone CTC-253B9, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    agtgggaaggccttaagaac 284
              ||||||||||||||||||||
Sbjct: 102192 agtgggaaggccttaagaac 102211

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>gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    agtgggaaggccttaagaac 284
              ||||||||||||||||||||
Sbjct: 119890 agtgggaaggccttaagaac 119871

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>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete
             sequences
          Length = 202014

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tacaagaacctgaaattcta 379
             ||||||||||||||||||||
Sbjct: 31468 tacaagaacctgaaattcta 31449

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>gb|BC071268.1| Mus musculus ferredoxin reductase, mRNA (cDNA clone MGC:78350
            IMAGE:6517167), complete cds
          Length = 1942

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 61   ccaagctcggcatcatccccaaca 84
            |||||||||| |||||||||||||
Sbjct: 1215 ccaagctcggaatcatccccaaca 1238

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>ref|NM_133904.1| Mus musculus acetyl-Coenzyme A carboxylase beta (Acacb), mRNA
          Length = 7461

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  ggactgggtccagaagctca 264
            ||||||||||||||||||||
Sbjct: 3036 ggactgggtccagaagctca 3055


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,578,527
Number of Sequences: 3902068
Number of extensions: 3578527
Number of successful extensions: 61428
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61163
Number of HSP's gapped (non-prelim): 262
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result