ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast55a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genom... 137 4e-29
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 4e-29
3gb|AF272758.1|AF272758 Zea mays kinesin heavy chain (KIN13) mRNA... 137 4e-29
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AK121995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
6dbj|AK110975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
7dbj|AK100380.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
8gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 117 3e-23
9emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 46 0.10
10gb|AC108696.2| Homo sapiens 3 BAC RP11-731C8 (Roswell Park Cance... 42 1.6
11gb|AC138601.5| Mus musculus chromosome 5, clone RP23-49G7, compl... 42 1.6
12gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, co... 42 1.6
13gb|AC171557.7| Mus musculus chromosome 7, clone RP24-62E17, comp... 42 1.6
14ref|NM_192853.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
15gb|AC024877.2| Caenorhabditis elegans cosmid Y95B8A, complete se... 40 6.3
16ref|XM_804997.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
17ref|XM_805707.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
18gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
19gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, compl... 40 6.3
20gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, compl... 40 6.3
21emb|AL354653.26| Human DNA sequence from clone RP11-326A14 on ch... 40 6.3
22gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, compl... 40 6.3
23gb|AF235100.4| Homo sapiens chromosome 8 clone RP11-98A24 map 8q... 40 6.3
24gb|AC106714.7| Homo sapiens X BAC RP11-399D20 (Roswell Park Canc... 40 6.3
25gb|AC093530.2| Homo sapiens chromosome 5 clone RP11-401N6, compl... 40 6.3
26gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, co... 40 6.3
27gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, compl... 40 6.3
28ref|NM_001037903.1| Caenorhabditis elegans Y95B8A.12a (Y95B8A.12... 40 6.3
29ref|NM_001037904.1| Caenorhabditis elegans Y95B8A.12b (Y95B8A.12... 40 6.3
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
32gb|AC022655.8| Homo sapiens, clone RP11-28O3, complete sequence 40 6.3
33gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
34gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C... 40 6.3
35dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
37dbj|AK108938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
38dbj|AK100552.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
39gb|U44403.1|HSU44403 Human Src-like adapter protein mRNA, comple... 40 6.3
40emb|AJ238593.1|HSA238593 Homo sapiens SLAP gene promoter region 40 6.3 
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence,
            complete sequence
          Length = 132292

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                        
Query: 243  agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
            |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 2068 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 2009

                                                                        
Query: 303  agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
            ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 2008 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 1952

                                                           
Query: 363  aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
            ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1951 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 1905



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 98/122 (80%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                        
Query: 60   tctgacaggaaatctgttctatcaattaatgcttccgaacagctgagcccaatccaagat 119
            ||||||||||||||| |||||||| ||| ||| |||   || |||   ||||| ||||| 
Sbjct: 2248 tctgacaggaaatcttttctatcagttagtgcctccccgcacctgtcaccaatgcaagac 2189

                                                                        
Query: 120  gcaatgttctgctcttctccaaagattc---acaaggcaagaaagagcattgcctcacca 176
             | | ||| || ||||||||||||||||   ||||||| ||||| |||||| ||||||||
Sbjct: 2188 cctacgttatgttcttctccaaagattcacaacaaggctagaaaaagcattacctcacca 2129

              
Query: 177  gg 178
            ||
Sbjct: 2128 gg 2127
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                            
Query: 243      agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
                |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 21497174 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 21497115

                                                                            
Query: 303      agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
                ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 21497114 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 21497058

                                                               
Query: 363      aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
                ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 21497057 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 21497011



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 98/122 (80%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                            
Query: 60       tctgacaggaaatctgttctatcaattaatgcttccgaacagctgagcccaatccaagat 119
                ||||||||||||||| |||||||| ||| ||| |||   || |||   ||||| ||||| 
Sbjct: 21497354 tctgacaggaaatcttttctatcagttagtgcctccccgcacctgtcaccaatgcaagac 21497295

                                                                            
Query: 120      gcaatgttctgctcttctccaaagattc---acaaggcaagaaagagcattgcctcacca 176
                 | | ||| || ||||||||||||||||   ||||||| ||||| |||||| ||||||||
Sbjct: 21497294 cctacgttatgttcttctccaaagattcacaacaaggctagaaaaagcattacctcacca 21497235

                  
Query: 177      gg 178
                ||
Sbjct: 21497234 gg 21497233



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 24      atgcacagcaatacaagtgc 43
               ||||||||||||||||||||
Sbjct: 7117190 atgcacagcaatacaagtgc 7117171



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 24      atgcacagcaatacaagtgc 43
               ||||||||||||||||||||
Sbjct: 4842052 atgcacagcaatacaagtgc 4842071
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>gb|AF272758.1|AF272758 Zea mays kinesin heavy chain (KIN13) mRNA, partial cds
          Length = 2798

 Score =  137 bits (69), Expect = 4e-29
 Identities = 134/155 (86%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                        
Query: 243  agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
            |||||| | ||||||||  ||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 1255 agtgcatttcgttcctctctacaatcaagcaagcttagccccactgactcactggctgca 1314

                                                                        
Query: 303  agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
            ||||| ||||| ||| |||||||||||||||||||||| |||||   |||||||||| ||
Sbjct: 1315 agtcttcaacgtggcttgcacattatagagtaccatcaacagaa---tccagccccaaga 1371

                                               
Query: 363  aaatcgttcgttggcctttcgtttgatcatttcgc 397
            ||||| ||  |||| ||||| ||||| ||||||||
Sbjct: 1372 aaatcatttattggtctttcatttgaccatttcgc 1406
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                            
Query: 243      agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
                |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 21490203 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 21490144

                                                                            
Query: 303      agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
                ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 21490143 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 21490087

                                                               
Query: 363      aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
                ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 21490086 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 21490040



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 98/122 (80%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                            
Query: 60       tctgacaggaaatctgttctatcaattaatgcttccgaacagctgagcccaatccaagat 119
                ||||||||||||||| |||||||| ||| ||| |||   || |||   ||||| ||||| 
Sbjct: 21490383 tctgacaggaaatcttttctatcagttagtgcctccccgcacctgtcaccaatgcaagac 21490324

                                                                            
Query: 120      gcaatgttctgctcttctccaaagattc---acaaggcaagaaagagcattgcctcacca 176
                 | | ||| || ||||||||||||||||   ||||||| ||||| |||||| ||||||||
Sbjct: 21490323 cctacgttatgttcttctccaaagattcacaacaaggctagaaaaagcattacctcacca 21490264

                  
Query: 177      gg 178
                ||
Sbjct: 21490263 gg 21490262



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 24      atgcacagcaatacaagtgc 43
               ||||||||||||||||||||
Sbjct: 7115085 atgcacagcaatacaagtgc 7115066



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 24      atgcacagcaatacaagtgc 43
               ||||||||||||||||||||
Sbjct: 4841267 atgcacagcaatacaagtgc 4841286
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>dbj|AK121995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110A05, full
            insert sequence
          Length = 3726

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Plus

                                                                        
Query: 243  agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
            |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 2056 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 2115

                                                                        
Query: 303  agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
            ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 2116 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 2172

                                                           
Query: 363  aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
            ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 2173 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 2219



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 98/122 (80%), Gaps = 3/122 (2%)
 Strand = Plus / Plus

                                                                        
Query: 60   tctgacaggaaatctgttctatcaattaatgcttccgaacagctgagcccaatccaagat 119
            ||||||||||||||| |||||||| ||| ||| |||   || |||   ||||| ||||| 
Sbjct: 1876 tctgacaggaaatcttttctatcagttagtgcctccccgcacctgtcaccaatgcaagac 1935

                                                                        
Query: 120  gcaatgttctgctcttctccaaagattc---acaaggcaagaaagagcattgcctcacca 176
             | | ||| || ||||||||||||||||   ||||||| ||||| |||||| ||||||||
Sbjct: 1936 cctacgttatgttcttctccaaagattcacaacaaggctagaaaaagcattacctcacca 1995

              
Query: 177  gg 178
            ||
Sbjct: 1996 gg 1997
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>dbj|AK110975.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C03, full
            insert sequence
          Length = 2011

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                        
Query: 243  agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
            |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 1406 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 1347

                                                                        
Query: 303  agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
            ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 1346 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 1290

                                                           
Query: 363  aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
            ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1289 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 1243



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   tctgacaggaaatctgttctatca 83
            ||||||||||||||| ||||||||
Sbjct: 1515 tctgacaggaaatcttttctatca 1492
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>dbj|AK100380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085E16, full
            insert sequence
          Length = 2709

 Score =  137 bits (69), Expect = 4e-29
 Identities = 143/167 (85%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                        
Query: 243  agtgcagtgcgttcctccttacaatcgagcaagcttagtcccactgactcgctggctgca 302
            |||||||| ||||| || ||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 1566 agtgcagttcgttcttctttacagtcaagcaagcttagcccaactgattcactggctgca 1507

                                                                        
Query: 303  agtctccaacggggcctgcacattatagagtaccatcagcagaatcctccagccccacga 362
            ||||||||||||||| |||||||||| ||||||||| | |||||    | || |||| ||
Sbjct: 1506 agtctccaacggggcttgcacattatggagtaccatgaacagaa---ccaaggcccaaga 1450

                                                           
Query: 363  aaatcgttcgttggcctttcgtttgatcatttcgcactgaacccccg 409
            ||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1449 aaatcatttgttggcctttcatttgatcattttgcactgaacccccg 1403



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   tctgacaggaaatctgttctatca 83
            ||||||||||||||| ||||||||
Sbjct: 1675 tctgacaggaaatcttttctatca 1652
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score =  117 bits (59), Expect = 3e-23
 Identities = 118/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Minus

                                                                          
Query: 273    aagcttagtcccactgactcgctggctgcaagtctccaacggggcctgcacattatagag 332
              |||||||| || ||||| || |||||||||||||||||||||||| |||||||||| |||
Sbjct: 190055 aagcttagcccaactgattcactggctgcaagtctccaacggggcttgcacattatggag 189996

                                                                          
Query: 333    taccatcagcagaatcctccagccccacgaaaatcgttcgttggcctttcgtttgatcat 392
              |||||| | |||||    | || |||| ||||||| || ||||||||||| |||||||||
Sbjct: 189995 taccatgaacagaa---ccaaggcccaagaaaatcatttgttggcctttcatttgatcat 189939

                               
Query: 393    ttcgcactgaacccccg 409
              || ||||||||||||||
Sbjct: 189938 tttgcactgaacccccg 189922
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 367     cgttcgttggcctttcgtttgatcatt 393
               |||||||||| ||||||||||||||||
Sbjct: 1756889 cgttcgttgggctttcgtttgatcatt 1756915
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>gb|AC108696.2| Homo sapiens 3 BAC RP11-731C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157342

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   ctcttctccaaagattcacaa 151
             |||||||||||||||||||||
Sbjct: 77741 ctcttctccaaagattcacaa 77721
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>gb|AC138601.5| Mus musculus chromosome 5, clone RP23-49G7, complete sequence
          Length = 129690

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 99  cagctgagcccaatccaagatgcaa 123
           |||||||||||||||||| ||||||
Sbjct: 6   cagctgagcccaatccaaaatgcaa 30
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>gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, complete sequence
          Length = 193386

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 99     cagctgagcccaatccaagatgcaa 123
              |||||||||||||||||| ||||||
Sbjct: 138068 cagctgagcccaatccaaaatgcaa 138092
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>gb|AC171557.7| Mus musculus chromosome 7, clone RP24-62E17, complete sequence
          Length = 163762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    aagagccccagaaaatgcaca 30
             |||||||||||||||||||||
Sbjct: 25027 aagagccccagaaaatgcaca 25047
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>ref|NM_192853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 167 tgcctcaccaggattctctccaagcaag 194
           |||||||||| ||| |||||||||||||
Sbjct: 217 tgcctcaccaagatcctctccaagcaag 244
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>gb|AC024877.2| Caenorhabditis elegans cosmid Y95B8A, complete sequence
          Length = 104970

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   aagtctccaacggggcctgcacat 325
             |||||||||||| |||||||||||
Sbjct: 72665 aagtctccaacgcggcctgcacat 72688
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>ref|XM_804997.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507639.90) partial mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 74   tgttctatcaattaatgcttccga 97
            |||||||||| |||||||||||||
Sbjct: 1188 tgttctatcagttaatgcttccga 1211
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>ref|XM_805707.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503781.30) partial mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 74   tgttctatcaattaatgcttccga 97
            |||||||||| |||||||||||||
Sbjct: 1188 tgttctatcagttaatgcttccga 1211
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     atgcacagcaatacaagtgc 43
              ||||||||||||||||||||
Sbjct: 153495 atgcacagcaatacaagtgc 153476
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>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence
          Length = 200294

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tccaagcaagctaagtgaat 204
             ||||||||||||||||||||
Sbjct: 17774 tccaagcaagctaagtgaat 17793
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>gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, complete sequence
          Length = 199869

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tccaagcaagctaagtgaat 204
             ||||||||||||||||||||
Sbjct: 44568 tccaagcaagctaagtgaat 44549
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>emb|AL354653.26| Human DNA sequence from clone RP11-326A14 on chromosome Xq13.3-21.2
              Contains the 3' end of the RPS6KA6 gene for ribosomal
              protein S6 kinase, complete sequence
          Length = 173760

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     tttctgacaggaaatctgtt 77
              ||||||||||||||||||||
Sbjct: 163673 tttctgacaggaaatctgtt 163654
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>gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, complete sequence
          Length = 71827

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aggaagagccccagaaaatg 26
             ||||||||||||||||||||
Sbjct: 53343 aggaagagccccagaaaatg 53362
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>gb|AF235100.4| Homo sapiens chromosome 8 clone RP11-98A24 map 8q24.3 , complete
             sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tccaagatgcaatgttctgc 131
             ||||||||||||||||||||
Sbjct: 58733 tccaagatgcaatgttctgc 58752
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>gb|AC106714.7| Homo sapiens X BAC RP11-399D20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gaaaatgcacagcaatacaa 39
              ||||||||||||||||||||
Sbjct: 168091 gaaaatgcacagcaatacaa 168110
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>gb|AC093530.2| Homo sapiens chromosome 5 clone RP11-401N6, complete sequence
          Length = 115015

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cacaaggcaagaaagagcat 166
             ||||||||||||||||||||
Sbjct: 13690 cacaaggcaagaaagagcat 13709
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>gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 183437

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    gaaaatgcacagcaatacaa 39
             ||||||||||||||||||||
Sbjct: 79538 gaaaatgcacagcaatacaa 79557
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>gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, complete sequence
          Length = 90963

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   caagaaagagcattgcctca 173
             ||||||||||||||||||||
Sbjct: 84559 caagaaagagcattgcctca 84540
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>ref|NM_001037903.1| Caenorhabditis elegans Y95B8A.12a (Y95B8A.12) mRNA, complete cds
          Length = 1876

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 302 aagtctccaacggggcctgcacat 325
           |||||||||||| |||||||||||
Sbjct: 455 aagtctccaacgcggcctgcacat 432
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>ref|NM_001037904.1| Caenorhabditis elegans Y95B8A.12b (Y95B8A.12) mRNA, complete cds
          Length = 1868

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 302 aagtctccaacggggcctgcacat 325
           |||||||||||| |||||||||||
Sbjct: 421 aagtctccaacgcggcctgcacat 398
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 99       cagctgagcccaatccaaga 118
                ||||||||||||||||||||
Sbjct: 27365770 cagctgagcccaatccaaga 27365751
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 167      tgcctcaccaggattctctccaagcaag 194
                |||||||||| ||| |||||||||||||
Sbjct: 24788494 tgcctcaccaagatcctctccaagcaag 24788521
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>gb|AC022655.8| Homo sapiens, clone RP11-28O3, complete sequence
          Length = 142630

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 307   tccaacggggcctgcacattatag 330
             |||||||||| |||||||||||||
Sbjct: 45010 tccaacggggtctgcacattatag 44987
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>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0049C20, from chromosome 3, complete sequence
          Length = 136098

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    atgcacagcaatacaagtgc 43
             ||||||||||||||||||||
Sbjct: 77148 atgcacagcaatacaagtgc 77167
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>gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C24, complete sequence
          Length = 119119

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   caagaaagagcattgcctca 173
             ||||||||||||||||||||
Sbjct: 72625 caagaaagagcattgcctca 72606
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>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0501G01
          Length = 154561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 167   tgcctcaccaggattctctccaagcaag 194
             |||||||||| ||| |||||||||||||
Sbjct: 11614 tgcctcaccaagatcctctccaagcaag 11641
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>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0686E06
          Length = 150474

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     cagctgagcccaatccaaga 118
              ||||||||||||||||||||
Sbjct: 108597 cagctgagcccaatccaaga 108578
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>dbj|AK108938.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B04, full
           insert sequence
          Length = 905

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 167 tgcctcaccaggattctctccaagcaag 194
           |||||||||| ||| |||||||||||||
Sbjct: 251 tgcctcaccaagatcctctccaagcaag 278
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>dbj|AK100552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103K13, full
            insert sequence
          Length = 1981

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   atgcacagcaatacaagtgc 43
            ||||||||||||||||||||
Sbjct: 1753 atgcacagcaatacaagtgc 1772
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>gb|U44403.1|HSU44403 Human Src-like adapter protein mRNA, complete cds
          Length = 2021

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 tccaagatgcaatgttctgc 131
           ||||||||||||||||||||
Sbjct: 75  tccaagatgcaatgttctgc 56
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>emb|AJ238593.1|HSA238593 Homo sapiens SLAP gene promoter region
          Length = 2853

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  tccaagatgcaatgttctgc 131
            ||||||||||||||||||||
Sbjct: 1784 tccaagatgcaatgttctgc 1765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,807,148
Number of Sequences: 3902068
Number of extensions: 3807148
Number of successful extensions: 65934
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65702
Number of HSP's gapped (non-prelim): 232
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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