ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52h12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 458 bits (231), Expect = e-126 Identities = 306/331 (92%) Strand = Plus / Minus Query: 51 gatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtccg 110 ||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23590189 gatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccg 23590130 Query: 111 gcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgaccg 170 |||||||| || || ||||||| ||| ||| | |||||||||||| |||||| |||| Sbjct: 23590129 ccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccg 23590070 Query: 171 cgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaagg 230 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 23590069 cgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaagg 23590010 Query: 231 gtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaa 290 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23590009 ttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaa 23589950 Query: 291 gtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggtg 350 |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 23589949 gtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtg 23589890 Query: 351 ggaggtgttcaaggagaagcagcagcgggag 381 ||||||||||||||||||||||||||||||| Sbjct: 23589889 ggaggtgttcaaggagaagcagcagcgggag 23589859 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 27188230 aactacctccgccccggcatc 27188250
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 458 bits (231), Expect = e-126 Identities = 306/331 (92%) Strand = Plus / Minus Query: 51 gatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtccg 110 ||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23518380 gatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccg 23518321 Query: 111 gcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgaccg 170 |||||||| || || ||||||| ||| ||| | |||||||||||| |||||| |||| Sbjct: 23518320 ccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccg 23518261 Query: 171 cgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaagg 230 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 23518260 cgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaagg 23518201 Query: 231 gtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaa 290 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23518200 ttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaa 23518141 Query: 291 gtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggtg 350 |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 23518140 gtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtg 23518081 Query: 351 ggaggtgttcaaggagaagcagcagcgggag 381 ||||||||||||||||||||||||||||||| Sbjct: 23518080 ggaggtgttcaaggagaagcagcagcgggag 23518050 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 27113830 aactacctccgccccggcatc 27113850
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 458 bits (231), Expect = e-126 Identities = 306/331 (92%) Strand = Plus / Plus Query: 51 gatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtccg 110 ||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 116221 gatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccg 116280 Query: 111 gcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgaccg 170 |||||||| || || ||||||| ||| ||| | |||||||||||| |||||| |||| Sbjct: 116281 ccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccg 116340 Query: 171 cgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaagg 230 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 116341 cgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaagg 116400 Query: 231 gtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaa 290 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 116401 ttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaa 116460 Query: 291 gtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggtg 350 |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 116461 gtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtg 116520 Query: 351 ggaggtgttcaaggagaagcagcagcgggag 381 ||||||||||||||||||||||||||||||| Sbjct: 116521 ggaggtgttcaaggagaagcagcagcgggag 116551
>dbj|AB071600.1| Oryza sativa (japonica cultivar-group) gene for transcription factor OsRS2, complete cds, cultivar:Nipponbare Length = 6510 Score = 458 bits (231), Expect = e-126 Identities = 306/331 (92%) Strand = Plus / Plus Query: 51 gatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtccg 110 ||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4441 gatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccg 4500 Query: 111 gcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgaccg 170 |||||||| || || ||||||| ||| ||| | |||||||||||| |||||| |||| Sbjct: 4501 ccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccg 4560 Query: 171 cgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaagg 230 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 4561 cgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaagg 4620 Query: 231 gtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaa 290 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4621 ttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaa 4680 Query: 291 gtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggtg 350 |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 4681 gtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtg 4740 Query: 351 ggaggtgttcaaggagaagcagcagcgggag 381 ||||||||||||||||||||||||||||||| Sbjct: 4741 ggaggtgttcaaggagaagcagcagcgggag 4771
>dbj|AB064519.1| Oryza sativa (japonica cultivar-group) OsRS2 mRNA for transcription factor rough sheath 2 like protein, complete cds Length = 1512 Score = 458 bits (231), Expect = e-126 Identities = 306/331 (92%) Strand = Plus / Plus Query: 51 gatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtccg 110 ||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 270 gatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccg 329 Query: 111 gcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgaccg 170 |||||||| || || ||||||| ||| ||| | |||||||||||| |||||| |||| Sbjct: 330 ccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccg 389 Query: 171 cgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaagg 230 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 390 cgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaagg 449 Query: 231 gtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaa 290 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 450 ttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaa 509 Query: 291 gtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggtg 350 |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 510 gtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtg 569 Query: 351 ggaggtgttcaaggagaagcagcagcgggag 381 ||||||||||||||||||||||||||||||| Sbjct: 570 ggaggtgttcaaggagaagcagcagcgggag 600
>gb|AF126489.1|AF126489 Zea mays rough sheath2 protein (rs2) gene, complete cds Length = 1420 Score = 432 bits (218), Expect = e-118 Identities = 314/346 (90%) Strand = Plus / Plus Query: 50 agatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtcc 109 ||||||||||| ||||||| ||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 47 agatgaaggagcgacagcgctggcggcctgaggaagacgccgtcctgcgcgcctacgtcc 106 Query: 110 ggcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgacc 169 ||||||| ||||| || |||||| |||||||| ||||||| ||||||| | ||||||||| Sbjct: 107 ggcagtacggcccccgcgagtggcacctggtgtcgcagcgcatgaacgtggccctcgacc 166 Query: 170 gcgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaag 229 ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 167 gcgacgccaagtcgtgcctggagcgctggaagaactacctccgccccgggatcaagaagg 226 Query: 230 ggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 | || |||||||| || |||||||| || || |||||||| ||||||||||||||||||| Sbjct: 227 gctcgctcaccgaggaggagcagcgcctggtgatccgcctgcaggccaagcacggcaaca 286 Query: 290 agtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggt 349 |||||||||||||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 287 agtggaagaagatcgccgccgaggtgcccgggcgcacggccaagcgcctcggcaagtggt 346 Query: 350 gggaggtgttcaaggagaagcagcagcgggagatcagggacagccg 395 |||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 347 gggaggtgttcaaggagaagcagcagcgggagctgagggacagccg 392
>gb|AF143447.1| Zea mays rough sheath 2 (rs2) mRNA, complete cds Length = 1692 Score = 432 bits (218), Expect = e-118 Identities = 314/346 (90%) Strand = Plus / Plus Query: 50 agatgaaggagagacagcggtggcggcctgaggaagacgccatcctccgctcctacgtcc 109 ||||||||||| ||||||| ||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 299 agatgaaggagcgacagcgctggcggcctgaggaagacgccgtcctgcgcgcctacgtcc 358 Query: 110 ggcagtatggcccacgtgagtggaacctggtggcgcagcggatgaacgcgcccctcgacc 169 ||||||| ||||| || |||||| |||||||| ||||||| ||||||| | ||||||||| Sbjct: 359 ggcagtacggcccccgcgagtggcacctggtgtcgcagcgcatgaacgtggccctcgacc 418 Query: 170 gcgacgccaagtcctgcctcgagcgctggaagaactacctccgccccggcatcaagaaag 229 ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 419 gcgacgccaagtcgtgcctggagcgctggaagaactacctccgccccgggatcaagaagg 478 Query: 230 ggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 | || |||||||| || |||||||| || || |||||||| ||||||||||||||||||| Sbjct: 479 gctcgctcaccgaggaggagcagcgcctggtgatccgcctgcaggccaagcacggcaaca 538 Query: 290 agtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttggcaagtggt 349 |||||||||||||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 539 agtggaagaagatcgccgccgaggtgcccgggcgcacggccaagcgcctcggcaagtggt 598 Query: 350 gggaggtgttcaaggagaagcagcagcgggagatcagggacagccg 395 |||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 599 gggaggtgttcaaggagaagcagcagcgggagctgagggacagccg 644
>gb|DQ074474.1| Malus x domestica MYB92 mRNA, complete cds Length = 1748 Score = 141 bits (71), Expect = 2e-30 Identities = 179/215 (83%) Strand = Plus / Plus Query: 159 gcccctcgaccgcgacgccaagtcctgcctcgagcgctggaagaactacctccgccccgg 218 ||||||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 583 gcccctcctccgtgaccccaagtcctgcctggagcggtggaagaactacctgaagcccgg 642 Query: 219 catcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaa 278 | | ||||| || || |||||| || |||||| |||||| || ||||||||| || Sbjct: 643 cctgaagaagggctcgctcaccccggaggagcaggccctcgtcgtctccctccaggcaaa 702 Query: 279 gcacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggct 338 |||||||||||||||||||||||||||||||||| | || ||||| || ||||||| || Sbjct: 703 gcacggcaacaagtggaagaagatcgccgccgagctccccggccgcacccccaagcgcct 762 Query: 339 tggcaagtggtgggaggtgttcaaggagaagcagc 373 ||||||||||||||||| || ||||||||||||| Sbjct: 763 cggcaagtggtgggaggtctttaaggagaagcagc 797
>gb|AY180132.1| Vitex cannabifolia phantastica transcription factor gene, partial cds Length = 692 Score = 131 bits (66), Expect = 2e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||| || Sbjct: 1 cacgggaacaagtggaagaagatcgccgccgaggtccctggccgcaccgccaagcgccta 60 Query: 340 ggcaagtggtgggaggtgttcaaggagaagcagc 373 ||||||||||||||||| |||||||||||||||| Sbjct: 61 ggcaagtggtgggaggttttcaaggagaagcagc 94
>gb|AY790244.1| Lotus corniculatus var. japonicus phantastica transcription factor a (PHANa) mRNA, complete cds Length = 1424 Score = 95.6 bits (48), Expect = 1e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcgg 255 |||||||||||||| ||||| ||||||||||| || ||||| || || |||||||| Sbjct: 160 tggaagaactacctgaagcccggaatcaagaaaggatctctcacggaggaagagcagcgc 219 Query: 256 ctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtg 315 || ||||||||||| || || || |||||||| ||||||||||| || || || || || Sbjct: 220 cttgtcatccgccttcaagcaaaacacggcaataagtggaagaaaattgctgcagaagtc 279 Query: 316 cctggccggacggccaagcggcttggcaagtggtgggaggtgttcaaggagaagcagcag 375 || || || || || ||| |||| ||||||||||||||||| || |||||||| |||||| Sbjct: 280 ccaggtcgaaccgctaagaggctaggcaagtggtgggaggtatttaaggagaaacagcag 339
>ref|NM_129319.2| Arabidopsis thaliana AS1 (ASYMMETRIC LEAVES 1); DNA binding / transcription factor AT2G37630 (AS1) mRNA, complete cds Length = 1455 Score = 87.7 bits (44), Expect = 3e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 220 atcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaag 279 |||||||||||||| | || || || |||||| |||| || ||||| || |||| || Sbjct: 337 atcaagaaagggtctttgacagaggaagagcagaggcttgtgatccgtcttcaggagaaa 396 Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||||||||||||||||||||| || || ||||| || || ||||||| |||||| | Sbjct: 397 cacggcaacaagtggaagaagattgctgctgaggttcccgggaggacggcaaagcggtta 456 Query: 340 ggcaagtggtgggaggtgttcaaggagaagca 371 || ||||||||||| ||||| ||||||||||| Sbjct: 457 gggaagtggtgggaagtgtttaaggagaagca 488
>gb|AY519578.1| Arabidopsis thaliana MYB transcription factor (At2g37630) mRNA, complete cds Length = 1104 Score = 87.7 bits (44), Expect = 3e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 220 atcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaag 279 |||||||||||||| | || || || |||||| |||| || ||||| || |||| || Sbjct: 169 atcaagaaagggtctttgacagaggaagagcagaggcttgtgatccgtcttcaggagaaa 228 Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||||||||||||||||||||| || || ||||| || || ||||||| |||||| | Sbjct: 229 cacggcaacaagtggaagaagattgctgctgaggttcccgggaggacggcaaagcggtta 288 Query: 340 ggcaagtggtgggaggtgttcaaggagaagca 371 || ||||||||||| ||||| ||||||||||| Sbjct: 289 gggaagtggtgggaagtgtttaaggagaagca 320
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 87.7 bits (44), Expect = 3e-14 Identities = 125/152 (82%) Strand = Plus / Minus Query: 220 atcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaag 279 |||||||||||||| | || || || |||||| |||| || ||||| || |||| || Sbjct: 38799 atcaagaaagggtctttgacagaggaagagcagaggcttgtgatccgtcttcaggagaaa 38740 Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||||||||||||||||||||| || || ||||| || || ||||||| |||||| | Sbjct: 38739 cacggcaacaagtggaagaagattgctgctgaggttcccgggaggacggcaaagcggtta 38680 Query: 340 ggcaagtggtgggaggtgttcaaggagaagca 371 || ||||||||||| ||||| ||||||||||| Sbjct: 38679 gggaagtggtgggaagtgtttaaggagaagca 38648
>gb|AF175996.1|AF175996 Arabidopsis thaliana putative transcription factor (MYB91) mRNA, complete cds Length = 1104 Score = 87.7 bits (44), Expect = 3e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 220 atcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccaggccaag 279 |||||||||||||| | || || || |||||| |||| || ||||| || |||| || Sbjct: 169 atcaagaaagggtctttgacagaggaagagcagaggcttgtgatccgtcttcaggagaaa 228 Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||||||||||||||||||||| || || ||||| || || ||||||| |||||| | Sbjct: 229 cacggcaacaagtggaagaagattgctgctgaggttcccgggaggacggcaaagcggtta 288 Query: 340 ggcaagtggtgggaggtgttcaaggagaagca 371 || ||||||||||| ||||| ||||||||||| Sbjct: 289 gggaagtggtgggaagtgtttaaggagaagca 320
>dbj|AP004490.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11G09, TM0022, complete sequence Length = 114576 Score = 87.7 bits (44), Expect = 3e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcgg 255 |||||||||||||| ||||| ||||||||||| || ||||| || || |||||||| Sbjct: 83551 tggaagaactacctgaagcccggaatcaagaaaggatctctcacggaggaagagcagcgc 83610 Query: 256 ctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtg 315 || ||||||||||| || || || |||||||| ||||||||||| || || || || || Sbjct: 83611 cttgtcatccgccttcaagcaaaacacggcaataagtggaagaaaattgctgcagaagtc 83670 Query: 316 cctggccggacggccaagcggcttggcaagtggtgggaggtgttcaaggagaagcagcag 375 || || || || || ||| |||| |||||||||||||| || ||||| ||||| |||||| Sbjct: 83671 ccaggtcgaaccgctaagaggctaggcaagtggtgggaagttttcaaagagaaacagcag 83730 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 281 acggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttg 340 |||| ||||| ||||||||||||||||| || || || || || ||||| ||||| | | Sbjct: 89626 acggaaacaaatggaagaagatcgccgctgaagtccccggtcgcacggcgaagcgattag 89685 Query: 341 gcaagtggtgggaggtgttcaaggagaagcagcag 375 | ||||||||||| || | ||| |||||||||||| Sbjct: 89686 ggaagtggtgggaagtctacaaagagaagcagcag 89720
>gb|AY180136.1| Fraxinus americana phantastica transcription factor gene, partial cds Length = 699 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||| ||||| ||||| || |||||||||||||| || ||||| || |||||| |||| Sbjct: 1 cacggaaacaaatggaaaaaaatcgccgccgaggttcccggccgcaccgccaagaggctg 60 Query: 340 ggcaagtggtgggaggtgttcaaggagaagcagc 373 || |||||||||||||| ||||||||||| |||| Sbjct: 61 ggtaagtggtgggaggttttcaaggagaaacagc 94
>gb|AY180135.1| Pachira aquatica phantastica transcription factor gene, partial cds Length = 674 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||| ||||| |||||||| || |||||||| || || ||||| || ||||| |||| Sbjct: 1 cacggtaacaaatggaagaaaatagccgccgaagtccccggccgtactgccaaaaggctc 60 Query: 340 ggcaagtggtgggaggtgttcaaggagaagcagc 373 ||||||||||||||||| | ||||||||| |||| Sbjct: 61 ggcaagtggtgggaggtttacaaggagaaacagc 94
>gb|AY790253.1| Glycine max phantastica transcription factor b (PHANb) mRNA, complete cds Length = 1300 Score = 63.9 bits (32), Expect = 4e-07 Identities = 143/180 (79%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcgg 255 ||||||||||||||| || |||||||| ||||| || || || || || |||||||| Sbjct: 153 tggaagaactacctcaagcctggcatcaaaaaaggctctcttactgaagaagagcagcgc 212 Query: 256 ctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtg 315 || ||||||| ||| || || || | || ||||| |||||||| ||||| || || || Sbjct: 213 cttgtcatccaccttcaagcaaaatatggaaacaaatggaagaaaatcgctgctgaagtc 272 Query: 316 cctggccggacggccaagcggcttggcaagtggtgggaggtgttcaaggagaagcagcag 375 || || || || || |||||| | |||||||||||||| || ||||| |||||||||||| Sbjct: 273 ccagggcgcactgctaagcggttaggcaagtggtgggaagtcttcaaagagaagcagcag 332
>gb|DQ074473.1| Malus x domestica MYB91 mRNA, complete cds Length = 1420 Score = 58.0 bits (29), Expect = 2e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 214 cccggcatcaagaaagggtccctcaccgacgacgagcagcggctcgtcatccgcctccag 273 ||||| || |||||||| ||||| || || || |||||||| || ||||| | || || Sbjct: 317 cccggtattaagaaaggatccctaactgaagaggagcagcgccttgtcatttgtcttcaa 376 Query: 274 gccaagcacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaag 333 ||||| ||||| || ||||||||||| || || || || || ||||| || ||||| ||| Sbjct: 377 gccaaacacggtaataagtggaagaaaattgctgctgaagtccctggtcgtacggctaag 436 Query: 334 cggcttggcaagtggtgggaggtgttcaaggagaagcagca 374 | | || ||||||||||| |||||||| ||||||||||| Sbjct: 437 agattgggaaagtggtgggaagtgttcaaagagaagcagca 477 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tggagatgaaggagagacagcg 68 |||||||||||||||||||||| Sbjct: 150 tggagatgaaggagagacagcg 171
>gb|AY180134.1| Acacia hindsii phantastica transcription factor gene, partial cds Length = 632 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 340 ggcaagtggtgggaggtgttcaaggagaagcagcag 375 |||||||||||||| |||||||| |||||||||||| Sbjct: 61 ggcaagtggtgggaagtgttcaaagagaagcagcag 96
>gb|AY180131.1| Aquilegia formosa phantastica transcription factor gene, partial cds Length = 642 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 340 ggcaagtggtgggaggtgttcaaggagaagca 371 |||||||||||||| ||||||||||||||||| Sbjct: 61 ggcaagtggtgggaagtgttcaaggagaagca 92
>emb|AJ311053.1|OSA311053 Oryza sativa mRNA for Myb15 protein (myb15 gene) Length = 1380 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 282 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 337
>emb|AJ311052.1|OSA311052 Oryza sativa mRNA for Myb13 protein (myb13 gene) Length = 1429 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 383 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 438
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 20618023 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 20617968
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 11634 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 11579
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 83681 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 83626
>dbj|AK121023.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M10, full insert sequence Length = 4669 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 4339 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 4394
>dbj|AK111740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047I22, full insert sequence Length = 1450 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 394 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 449
>dbj|AK106039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D11, full insert sequence Length = 1139 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaaca 289 ||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||| Sbjct: 393 cctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaaca 448
>gb|AY790252.1| Glycine max phantastica transcription factor a (PHANa) mRNA, complete cds Length = 1242 Score = 54.0 bits (27), Expect = 4e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcgg 255 ||||||||||||||| |||||||| || ||||| || || || || || |||||||| Sbjct: 153 tggaagaactacctcaaacccggcattaaaaaaggatctcttactgaggaagagcagcgt 212 Query: 256 ctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtg 315 || |||||| || || || | |||||| |||||||||||||| || || || | || Sbjct: 213 ctagtcatcaatcttcaagcaacgcacgggaacaagtggaagaaaattgcagcacaagtc 272 Query: 316 cctggccggacggccaagcggcttggcaagtggtgggaggtgttcaaggagaagcagca 374 ||||| || || || ||| || | || |||||||||||||| || |||||||||||||| Sbjct: 273 cctggtcgcactgcgaagaggttagggaagtggtgggaggtatttaaggagaagcagca 331
>gb|AY790245.1| Lotus corniculatus var. japonicus phantastica transcription factor b (PHANb) mRNA, complete cds Length = 1218 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 281 acggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggcttg 340 |||| ||||| ||||||||||||||||| || || || || || ||||| ||||| | | Sbjct: 245 acggaaacaaatggaagaagatcgccgctgaagtccccggtcgcacggcgaagcgattag 304 Query: 341 gcaagtggtgggaggtgttcaaggagaagcagcag 375 | ||||||||||| || | ||| |||||||||||| Sbjct: 305 ggaagtggtgggaagtctacaaagagaagcagcag 339
>emb|AM156904.1| Zea mays mRNA for transcription factor MYB2 (myb2 gene) Length = 1339 Score = 52.0 bits (26), Expect = 0.001 Identities = 83/102 (81%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcag 252 ||||||| |||||||||||||||| ||||||| || | |||||||||||||| || Sbjct: 243 cgctggaccaactacctccgccccgacatcaagcgcggcaacttcaccgacgacgaggag 302 Query: 253 cggctcgtcatccgcctccaggccaagcacggcaacaagtgg 294 || ||| ||||| ||||||| ||| ||| ||| |||| |||| Sbjct: 303 cgcctcatcatcggcctccatgcccagctcggtaacaggtgg 344
>gb|AF470090.1| Zea mays P-type R2R3 Myb protein (Myb49) gene, complete cds Length = 773 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcag 252 ||||||| |||||||||||||||| ||||||| || | |||||||||||||| || Sbjct: 350 cgctggaccaactacctccgccccgacatcaagcgcggcaacttcaccgacgacgaggag 409 Query: 253 cggctcgtcatccgcctccaggccaagcacggcaaca 289 || ||| ||||| ||||||| ||| ||| ||| |||| Sbjct: 410 cgcctcatcatcggcctccatgcccagctcggtaaca 446
>emb|AJ005586.1|AMA005586 Antirrhinum majus mRNA for MYB-related transcription factor Length = 1497 Score = 46.1 bits (23), Expect = 0.086 Identities = 77/95 (81%) Strand = Plus / Plus Query: 280 cacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaagcggctt 339 ||||||||||||||||| |||||||| || || || || || || || ||||| | ||| Sbjct: 416 cacggcaacaagtggaaaaagatcgctgctgaagttccaggacgaactgccaaaagactt 475 Query: 340 ggcaagtggtgggaggtgttcaaggagaagcagca 374 || ||||||||||| || || || |||||| |||| Sbjct: 476 ggtaagtggtgggaagtttttaaagagaagaagca 510
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatc 264 |||| ||||||||||| |||||||||||||| Sbjct: 8262335 cctctccgacgacgaggagcggctcgtcatc 8262365 Score = 44.1 bits (22), Expect = 0.34 Identities = 46/54 (85%) Strand = Plus / Plus Query: 239 ccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaagt 292 ||||||||||| |||| ||| |||||| |||||| |||| | ||||||||||| Sbjct: 716034 ccgacgacgaggagcgcctcatcatccacctccacgccaccctcggcaacaagt 716087
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatc 264 |||| ||||||||||| |||||||||||||| Sbjct: 154698 cctctccgacgacgaggagcggctcgtcatc 154728
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatc 264 |||| ||||||||||| |||||||||||||| Sbjct: 55840 cctctccgacgacgaggagcggctcgtcatc 55870
>gb|AY667453.1| Selaginella viticulosa PHANTASTICA-like protein (ARP1) mRNA, complete cds Length = 1540 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Plus Query: 55 aaggagagacagcggtggcggcctgaggaagacgc 89 ||||| ||||||||||||| ||| ||||||||||| Sbjct: 283 aaggacagacagcggtggcagccagaggaagacgc 317
>dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C06, full insert sequence Length = 1163 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 234 cctcaccgacgacgagcagcggctcgtcatc 264 |||| ||||||||||| |||||||||||||| Sbjct: 385 cctctccgacgacgaggagcggctcgtcatc 415
>ref|XM_463409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 193 tggatgaactacctccgccccgacatcaag 222
>gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone CL034867.1 R2R3-MYB gene region Length = 49192 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 7917 tggatgaactacctccgccccgacatcaag 7888
>gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone CLC13210-1 R2R3-MYB gene region Length = 5648 Score = 44.1 bits (22), Expect = 0.34 Identities = 46/54 (85%) Strand = Plus / Plus Query: 239 ccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaagt 292 ||||||||||| |||| ||| |||||| |||||| |||| | ||||||||||| Sbjct: 888 ccgacgacgaggagcgcctcatcatccacctccacgccaccctcggcaacaagt 941
>gb|AC092265.3| Homo sapiens chromosome 1 clone RP4-656G21, complete sequence Length = 129231 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 agaagcagcagcgggagatcag 386 |||||||||||||||||||||| Sbjct: 95822 agaagcagcagcgggagatcag 95801
>emb|CR670610.2|CNS0FGEW Tetraodon nigroviridis full-length cDNA Length = 1157 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 agatggagatgaaggagagacagcgg 69 ||||||||||||||||||| |||||| Sbjct: 518 agatggagatgaaggagagccagcgg 543
>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence Length = 239297 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 73061 aaggagaagcagcagcgggaga 73082
>gb|AF515725.1| Lolium perenne R2R3 MYB protein MYB3 (MYB3) gene, partial cds Length = 277 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 ||||| |||||||||||||||| ||||||| Sbjct: 206 tggaacaactacctccgccccgacatcaag 235
>gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein gene, partial cds Length = 1021 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 400 tggatgaactacctccgccccgacatcaag 371
>gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein gene, partial cds Length = 2951 Score = 44.1 bits (22), Expect = 0.34 Identities = 46/54 (85%) Strand = Plus / Minus Query: 239 ccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaagt 292 ||||||||||| |||| ||| |||||| |||||| |||| | ||||||||||| Sbjct: 513 ccgacgacgaggagcgcctcatcatccacctccacgccaccctcggcaacaagt 460
>gb|AY365034.1| Zea mays MYB-like protein 2 mRNA, complete cds Length = 1164 Score = 44.1 bits (22), Expect = 0.34 Identities = 79/98 (80%) Strand = Plus / Plus Query: 192 gcgctggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagca 251 |||||||| |||||||||||||| | | ||||| ||| |||||| |||| |||| | Sbjct: 349 gcgctggaccaactacctccgcccggacctcaagcgcgggctcctcacggacgccgagga 408 Query: 252 gcggctcgtcatccgcctccaggccaagcacggcaaca 289 || | |||||||| |||||| ||||||| |||||||| Sbjct: 409 gcaggtcgtcatcgacctccacgccaagctcggcaaca 446
>gb|AY365033.1| Zea mays MYB-like protein 1 mRNA, complete cds Length = 1417 Score = 44.1 bits (22), Expect = 0.34 Identities = 79/98 (80%) Strand = Plus / Plus Query: 192 gcgctggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagca 251 |||||||| |||||||||||||| | | ||||| ||| |||||| |||| |||| | Sbjct: 349 gcgctggaccaactacctccgcccggacctcaagcgcgggctcctcacggacgccgagga 408 Query: 252 gcggctcgtcatccgcctccaggccaagcacggcaaca 289 || | |||||||| |||||| ||||||| |||||||| Sbjct: 409 gcaggtcgtcatcgacctccacgccaagctcggcaaca 446
>gb|AY228766.1| Eschscholzia californica subsp. californica phantastica-like MYB protein (Phan) mRNA, complete cds Length = 1471 Score = 44.1 bits (22), Expect = 0.34 Identities = 79/98 (80%) Strand = Plus / Plus Query: 274 gccaagcacggcaacaagtggaagaagatcgccgccgaggtgcctggccggacggccaag 333 ||||| ||||| |||||||||||||| || || || || || || || || ||||| ||| Sbjct: 359 gccaaacacggtaacaagtggaagaaaattgcagctgaagttccggggcgaacggcaaag 418 Query: 334 cggcttggcaagtggtgggaggtgttcaaggagaagca 371 | | |||||||||||||| ||||| || |||||||| Sbjct: 419 agattaggcaagtggtgggaagtgtttaaagagaagca 456
>dbj|AK040152.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430070G12 product:hypothetical protein, full insert sequence Length = 3223 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 1511 aaggagaagcagcagcgggaga 1532
>dbj|AK084063.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130081D04 product:hypothetical Calponin homology (CH) domain containing protein, full insert sequence Length = 1972 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 1942 aaggagaagcagcagcgggaga 1963
>gb|BC038177.1| Mus musculus RIKEN cDNA 5330421F07 gene, mRNA (cDNA clone IMAGE:1514625) Length = 1495 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 655 aaggagaagcagcagcgggaga 676
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 28790016 tggatgaactacctccgccccgacatcaag 28790045 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 37925774 cgctggatgaactacctccgccccg 37925798
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 8059 tggatgaactacctccgccccgacatcaag 8088
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 44.1 bits (22), Expect = 0.34 Identities = 46/54 (85%) Strand = Plus / Plus Query: 239 ccgacgacgagcagcggctcgtcatccgcctccaggccaagcacggcaacaagt 292 ||||||||||| |||| ||| |||||| |||||| |||| | ||||||||||| Sbjct: 122462 ccgacgacgaggagcgcctcatcatccacctccacgccaccctcggcaacaagt 122515
>dbj|AK129480.1| Mus musculus mRNA for mKIAA3015 protein Length = 5339 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 1521 aaggagaagcagcagcgggaga 1542
>dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-A12, full insert sequence Length = 1031 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 234 tggatgaactacctccgccccgacatcaag 263
>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence Length = 205102 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 44479 aaggagaagcagcagcgggaga 44458
>gb|AY111641.1| Zea mays CL1341_1 mRNA sequence Length = 608 Score = 44.1 bits (22), Expect = 0.34 Identities = 79/98 (80%) Strand = Plus / Plus Query: 192 gcgctggaagaactacctccgccccggcatcaagaaagggtccctcaccgacgacgagca 251 |||||||| |||||||||||||| | | ||||| ||| |||||| |||| |||| | Sbjct: 354 gcgctggaccaactacctccgcccggacctcaagcgcgggctcctcacggacgccgagga 413 Query: 252 gcggctcgtcatccgcctccaggccaagcacggcaaca 289 || | |||||||| |||||| ||||||| |||||||| Sbjct: 414 gcaggtcgtcatcgacctccacgccaagctcggcaaca 451
>ref|NM_175272.2| Mus musculus RIKEN cDNA 5330421F07 gene (5330421F07Rik), mRNA Length = 3223 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcgggaga 382 |||||||||||||||||||||| Sbjct: 1511 aaggagaagcagcagcgggaga 1532
>dbj|D88620.1| Oryza sativa mRNA for OSMYB4, complete cds Length = 1014 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 196 tggaagaactacctccgccccggcatcaag 225 |||| ||||||||||||||||| ||||||| Sbjct: 247 tggatgaactacctccgccccgacatcaag 276
>ref|NM_190827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 166 cgctggatgaactacctccgccccg 190
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gtggtgcaggtgcagatggag 51 ||||||||||||||||||||| Sbjct: 863972 gtggtgcaggtgcagatggag 863952
>gb|AY559043.1| Nicotiana tabacum phantastica mRNA, complete cds Length = 1704 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 caggccaagcacggcaacaagtggaagaa 299 |||||||| ||||||||||| |||||||| Sbjct: 576 caggccaaacacggcaacaaatggaagaa 604
>ref|XM_572304.1| Cryptococcus neoformans var. neoformans JEC21 pof4 protein (CNH01130) partial mRNA Length = 1769 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gtggtgcaggtgcagatggag 51 ||||||||||||||||||||| Sbjct: 1495 gtggtgcaggtgcagatggag 1515
>gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL026180.5 R2R3-MYB gene region Length = 24910 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 20738 cgctggatgaactacctccgccccg 20762
>emb|X70880.1|HVMYB2G H.vulgare Myb2 gene Length = 1093 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 811 cgctggatgaactacctccgccccg 835
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA Length = 1102 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 209 cgctggatgaactacctccgccccg 233
>emb|AJ601376.1| Lolium multiflorum partial mRNA for putative R2R3 MYB transcription factor (myb1 gene) Length = 167 Score = 42.1 bits (21), Expect = 1.4 Identities = 75/93 (80%) Strand = Plus / Minus Query: 202 aactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcggctcgtc 261 |||||||||||||||| ||||||| || | || ||||||||||| |||| ||| || Sbjct: 140 aactacctccgccccgacatcaagcgcggcaacttctccgacgacgaggagcgcctcatc 81 Query: 262 atccgcctccaggccaagcacggcaacaagtgg 294 ||| ||||||| ||| | ||||||||||||| Sbjct: 80 atcagcctccacgccgccctcggcaacaagtgg 48
>gb|AF467734.1| Oryza sativa putative myb protein mRNA, partial cds Length = 600 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 238 cgctggatgaactacctccgccccg 262
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 tgttcaaggagaagcagcagcggga 380 |||||||| |||||||||||||||| Sbjct: 808746 tgttcaagaagaagcagcagcggga 808722
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 147130 cgctggatgaactacctccgccccg 147154
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 6718 cgctggatgaactacctccgccccg 6742
>gb|AF195008.1|AF195008 Eremothecium gossypii Rho4 (RHO4) gene, complete cds Length = 1157 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 tgttcaaggagaagcagcagcggga 380 |||||||| |||||||||||||||| Sbjct: 892 tgttcaagaagaagcagcagcggga 916
>ref|NM_209012.1| Eremothecium gossypii ACR257Cp (ACR257C), mRNA Length = 780 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 tgttcaaggagaagcagcagcggga 380 |||||||| |||||||||||||||| Sbjct: 701 tgttcaagaagaagcagcagcggga 725
>gb|AF099439.1|AF099439 Zea mays clone ZmMYBIQ26 R2R3MYB-domain protein mRNA, partial cds Length = 129 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 4 aactacctccgccccggcatc 24
>gb|AF099412.1|AF099412 Zea mays clone ZmMYBIM61 R2R3MYB-domain protein mRNA, partial cds Length = 129 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 4 aactacctccgccccggcatc 24
>gb|AY112591.1| Zea mays CL1320_1 mRNA sequence Length = 129 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 4 aactacctccgccccggcatc 24
>dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F12, full insert sequence Length = 1037 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 262 cgctggatgaactacctccgccccg 286
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 127129 aactacctccgccccggcatc 127149
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatc 222 ||||||||||||||||||||| Sbjct: 1262 aactacctccgccccggcatc 1282
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 cgctggaagaactacctccgccccg 217 ||||||| ||||||||||||||||| Sbjct: 22050 cgctggatgaactacctccgccccg 22074
>ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatcaag 225 |||||||||||||||| ||||||| Sbjct: 297 aactacctccgccccgacatcaag 320
>ref|XM_519674.1| PREDICTED: Pan troglodytes similar to tripartite motif-containing 35 isoform 1 (LOC464072), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 722 tgcagatggagatgaaggag 741
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cgacgacgagcagcggctcg 259 |||||||||||||||||||| Sbjct: 107375 cgacgacgagcagcggctcg 107356
>ref|NM_146084.1| Mus musculus RIKEN cDNA 2610024E20 gene (2610024E20Rik), mRNA Length = 3359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggtgttcaaggagaagcagc 373 |||||||||||||||||||| Sbjct: 1668 ggtgttcaaggagaagcagc 1687
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 183127 caaggagaagcagcagcggg 183108
>gb|BC031465.1| Mus musculus RIKEN cDNA 2610024E20 gene, mRNA (cDNA clone MGC:25564 IMAGE:3981146), complete cds Length = 3359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggtgttcaaggagaagcagc 373 |||||||||||||||||||| Sbjct: 1668 ggtgttcaaggagaagcagc 1687
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcgaccgcgacgccaagtcctgcc 187 ||||| |||||||||||||||||| Sbjct: 98568 tcgacggcgacgccaagtcctgcc 98545
>ref|XM_950825.1| Neurospora crassa OR74A hypothetical protein (NCU01821.1) partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cgggagatcagggacagccg 395 |||||||||||||||||||| Sbjct: 56 cgggagatcagggacagccg 37
>ref|XM_596498.2| PREDICTED: Bos taurus similar to tripartite motif-containing 35 isoform 1 (LOC518310), mRNA Length = 1602 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 722 tgcagatggagatgaaggag 741
>ref|XM_328259.1| Neurospora crassa OR74A hypothetical protein (NCU01821.1) partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cgggagatcagggacagccg 395 |||||||||||||||||||| Sbjct: 56 cgggagatcagggacagccg 37
>ref|NM_171982.3| Homo sapiens tripartite motif-containing 35 (TRIM35), transcript variant 2, mRNA Length = 4227 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 804 tgcagatggagatgaaggag 823
>gb|AF494189.1| Homo sapiens hemopoietic lineage switch 5 gene, partial sequence Length = 2358 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 14 tgcagatggagatgaaggag 33
>gb|AF492463.1| Homo sapiens hemopoeitic lineage switch gene 5 (HLS5) mRNA, complete cds Length = 4196 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 804 tgcagatggagatgaaggag 823
>gb|AF474115.1| Zea mays typical P-type R2R3 Myb protein (Myb1) gene, partial cds Length = 2399 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatcaag 225 |||||||||||||||| ||||||| Sbjct: 1951 aactacctccgccccgacatcaag 1974
>ref|XM_741648.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g01910) partial mRNA Length = 1794 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gatgaaggagagacagcggt 70 |||||||||||||||||||| Sbjct: 496 gatgaaggagagacagcggt 515
>ref|XM_744194.1| Aspergillus fumigatus Af293 integral peroxisomal membrane peroxin (Afu2g01510) partial mRNA Length = 1359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gcggctcgtcatccgcctcc 271 |||||||||||||||||||| Sbjct: 208 gcggctcgtcatccgcctcc 227
>gb|AC115305.4| Mus musculus BAC clone RP24-372L1 from 18, complete sequence Length = 155389 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggtgttcaaggagaagcagc 373 |||||||||||||||||||| Sbjct: 79464 ggtgttcaaggagaagcagc 79483
>gb|BC058243.1| Mus musculus RIKEN cDNA 2610510J17 gene, mRNA (cDNA clone MGC:68092 IMAGE:6309162), complete cds Length = 1740 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 1422 aggagaagcagcagcgggag 1403
>gb|BC018337.1| Homo sapiens tripartite motif-containing 35, mRNA (cDNA clone IMAGE:4215244), complete cds Length = 2795 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 916 tgcagatggagatgaaggag 935
>emb|AL096704.9|HSDJ833K8 Human DNA sequence from clone RP5-833K8 on chromosome 10 Contains one CpG island, complete sequence Length = 96270 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggtgcagatggagatgaag 57 |||||||||||||||||||| Sbjct: 51325 aggtgcagatggagatgaag 51306
>ref|XM_961753.1| PREDICTED: Tribolium castaneum similar to methionine synthase reductase isoform 2 (LOC655238), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ggtgggaggtgttcaaggag 366 |||||||||||||||||||| Sbjct: 611 ggtgggaggtgttcaaggag 592
>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete sequence Length = 201643 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ggtgttcaaggagaagcagc 373 |||||||||||||||||||| Sbjct: 16069 ggtgttcaaggagaagcagc 16050
>gb|BC069226.1| Homo sapiens tripartite motif-containing 35, transcript variant 1, mRNA (cDNA clone MGC:78391 IMAGE:6428667), complete cds Length = 3334 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 748 tgcagatggagatgaaggag 767
>gb|AC162858.6| Mus musculus chromosome 8, clone RP23-117O14, complete sequence Length = 167086 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 146611 aggagaagcagcagcgggag 146630
>emb|CR858687.1| Pongo pygmaeus mRNA; cDNA DKFZp468B2113 (from clone DKFZp468B2113) Length = 3326 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 760 tgcagatggagatgaaggag 779
>dbj|AB029021.1| Homo sapiens mRNA for KIAA1098 protein, partial cds Length = 4181 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 756 tgcagatggagatgaaggag 775
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 96906 caaggagaagcagcagcggg 96925
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gagaagcagcagcgggagat 383 |||||||||||||||||||| Sbjct: 15056 gagaagcagcagcgggagat 15037
>gb|AC009373.7| Drosophila melanogaster 3L BAC RP98-22B18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167630 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gagaagcagcagcgggagat 383 |||||||||||||||||||| Sbjct: 161938 gagaagcagcagcgggagat 161919
>gb|AY113275.1| Drosophila melanogaster AT17273 full insert cDNA Length = 1064 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gagaagcagcagcgggagat 383 |||||||||||||||||||| Sbjct: 617 gagaagcagcagcgggagat 636
>ref|NM_168734.2| Drosophila melanogaster CG6333-RA (CG6333), mRNA Length = 694 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gagaagcagcagcgggagat 383 |||||||||||||||||||| Sbjct: 377 gagaagcagcagcgggagat 396
>gb|AF466145.1| Rattus norvegicus retinoic acid inducible in neuroblastoma cells RAINB1 mRNA, partial cds Length = 474 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 aaggagaagcagcagcggga 380 |||||||||||||||||||| Sbjct: 455 aaggagaagcagcagcggga 474
>gb|AC022880.10| Homo sapiens chromosome , clone RP11-436P7, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cagatggagatgaaggagag 62 |||||||||||||||||||| Sbjct: 68603 cagatggagatgaaggagag 68584
>ref|NM_011323.1| Mus musculus sodium channel, voltage-gated, type VIII, alpha (Scn8a), mRNA Length = 5937 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 5856 caaggagaagcagcagcggg 5875
>dbj|AK029766.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930539C08 product:similar to GAP-LIKE PROTEIN [Homo sapiens], full insert sequence Length = 4732 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggtgttcaaggagaagcagc 373 |||||||||||||||||||| Sbjct: 1784 ggtgttcaaggagaagcagc 1803
>gb|AC124649.6| Homo sapiens chromosome 8, clone RP11-23I8, complete sequence Length = 191004 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tgcagatggagatgaaggag 60 |||||||||||||||||||| Sbjct: 112677 tgcagatggagatgaaggag 112658
>gb|BC027119.1| Mus musculus RIKEN cDNA 2610510J17 gene, mRNA (cDNA clone IMAGE:5356609), partial cds Length = 2511 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 2235 aggagaagcagcagcgggag 2216
>dbj|AK083220.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630029C19 product:sodium channel, voltage-gated, type VIII, alpha polypeptide, full insert sequence Length = 4675 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 3508 caaggagaagcagcagcggg 3527
>gb|AC026413.5|AC026413 Homo sapiens chromosome 5 clone CTD-2030B15, complete sequence Length = 117928 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cagatggagatgaaggagag 62 |||||||||||||||||||| Sbjct: 96054 cagatggagatgaaggagag 96035
>dbj|AK012097.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610510J17 product:weakly similar to UNCHARACTERIZED BONE MARROW PROTEIN BM039 [Homo sapiens], full insert sequence Length = 1770 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 1512 aggagaagcagcagcgggag 1493
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcgaccgcgacgccaagtcctgcc 187 ||||| |||||||||||||||||| Sbjct: 28463644 tcgacggcgacgccaagtcctgcc 28463621
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 aactacctccgccccggcatcaag 225 |||||||||||||||| ||||||| Sbjct: 24898129 aactacctccgccccgacatcaag 24898106
>gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5, complete sequence Length = 124289 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cagatggagatgaaggagag 62 |||||||||||||||||||| Sbjct: 122383 cagatggagatgaaggagag 122364
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 aactacctccgccccggcatcaag 225 |||||||||||||||| ||||||| Sbjct: 59412 aactacctccgccccgacatcaag 59389
>dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C03, full insert sequence Length = 1038 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatcaag 225 |||||||||||||||| ||||||| Sbjct: 297 aactacctccgccccgacatcaag 320
>ref|XM_560980.1| Anopheles gambiae str. PEST ENSANGP00000029029 (ENSANGG00000025122), partial mRNA Length = 381 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 tgttcaaggagaagcagcagcggg 379 ||||||||||| |||||||||||| Sbjct: 215 tgttcaaggagcagcagcagcggg 238
>dbj|AK069002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E03, full insert sequence Length = 1288 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 tcgaccgcgacgccaagtcctgcc 187 ||||| |||||||||||||||||| Sbjct: 681 tcgacggcgacgccaagtcctgcc 704
>gb|AF099417.1|AF099417 Zea mays clone ZmMYBIP114 R2R3MYB-domain protein mRNA, partial cds Length = 129 Score = 40.1 bits (20), Expect = 5.3 Identities = 71/88 (80%) Strand = Plus / Plus Query: 202 aactacctccgccccggcatcaagaaagggtccctcaccgacgacgagcagcggctcgtc 261 |||||||||||||| | | ||||| ||| |||||| |||| |||| ||| | ||||| Sbjct: 4 aactacctccgcccggacctcaagcgcgggctcctcacggacgccgaggagcaggtcgtc 63 Query: 262 atccgcctccaggccaagcacggcaaca 289 ||| |||||| ||||||| |||||||| Sbjct: 64 atcgacctccacgccaagctcggcaaca 91
>gb|AF049617.1|AF049617 Mus musculus neuronal voltage-gated sodium channel alpha subunit (Scn8a) mRNA, complete cds Length = 5937 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 5856 caaggagaagcagcagcggg 5875
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gagaagcagcagcgggagat 383 |||||||||||||||||||| Sbjct: 419141 gagaagcagcagcgggagat 419122
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 158763 aggagaagcagcagcgggag 158744
>dbj|AP006287.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-1167A19, complete sequence Length = 208726 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agatggagatgaaggagagacagc 67 ||||||||||||| |||||||||| Sbjct: 132995 agatggagatgaatgagagacagc 133018
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 acctggtggcgcagcggatg 153 |||||||||||||||||||| Sbjct: 1349356 acctggtggcgcagcggatg 1349337
>gb|U26707.1|MMU26707 Mus musculus voltage-gated sodium channel alpha subunit SCN8A (Scn8a) mRNA, complete cds Length = 5352 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 caaggagaagcagcagcggg 379 |||||||||||||||||||| Sbjct: 5130 caaggagaagcagcagcggg 5149
>gb|AC158359.2| Mus musculus BAC clone RP23-412H3 from chromosome 13, complete sequence Length = 210045 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggcctgtggtgcaggtgcag 45 |||||||||||||||||||| Sbjct: 63684 ggcctgtggtgcaggtgcag 63703
>ref|NM_028131.1| Mus musculus RIKEN cDNA 2610510J17 gene (2610510J17Rik), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aggagaagcagcagcgggag 381 |||||||||||||||||||| Sbjct: 1512 aggagaagcagcagcgggag 1493
>dbj|AP001201.7| Homo sapiens genomic DNA, chromosome 11, clone:RP11-821O7, complete sequence Length = 182547 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agatggagatgaaggagagacagc 67 ||||||||||||| |||||||||| Sbjct: 152674 agatggagatgaatgagagacagc 152697
>dbj|AP003484.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-734C14, complete sequence Length = 206750 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcagatggagatgaaggaga 61 |||||||||||||||||||| Sbjct: 202189 gcagatggagatgaaggaga 202170
>dbj|AP003401.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-782L18, complete sequence Length = 20000 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcagatggagatgaaggaga 61 |||||||||||||||||||| Sbjct: 86 gcagatggagatgaaggaga 67 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,092,527 Number of Sequences: 3902068 Number of extensions: 3092527 Number of successful extensions: 70808 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 70038 Number of HSP's gapped (non-prelim): 766 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
