Clone Information

BLAST Search Result

Clone Name	bast52h08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CJ095_HUMAN (Q9H7T3) Protein C10orf95	35	0.11
2	MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor (Mu...	34	0.15
3	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	33	0.43
4	TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box pro...	32	0.73
5	MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor (...	32	0.73
6	CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor	32	0.95
7	PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.1...	32	0.95
8	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	32	0.95
9	COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor	31	1.2
10	EZ3_MAIZE (Q8S4P4) Polycomb protein EZ3 (Enhancer of zeste prote...	31	1.2
11	EZ2_MAIZE (Q8S4P5) Polycomb protein EZ2 (Enhancer of zeste prote...	31	1.2
12	TES_MOUSE (P47226) Testin (TES1/TES2)	31	1.2
13	TEGU_EBV (P03186) Large tegument protein	31	1.6
14	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	31	1.6
15	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	31	1.6
16	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	31	1.6
17	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	30	2.1
18	COTE1_HUMAN (P81408) COTE1 protein	30	2.1
19	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	2.8
20	EPN3_MOUSE (Q91W69) Epsin-3 (EPS-15-interacting protein 3)	30	2.8
21	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	30	2.8
22	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	30	2.8
23	CS016_HUMAN (Q8ND99) Protein C19orf16	30	2.8
24	CBPA_DICDI (P35085) Calcium-binding protein	30	3.6
25	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	30	3.6
26	PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)	30	3.6
27	LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	30	3.6
28	LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	30	3.6
29	METE_XYLFA (Q9PB72) 5-methyltetrahydropteroyltriglutamate--homoc...	30	3.6
30	M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kin...	30	3.6
31	LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding pro...	30	3.6
32	CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor	30	3.6
33	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	30	3.6
34	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.6
35	ENDX_PSEFL (Q9WVZ1) Extracellular endonuclease precursor (EC 3.1...	30	3.6
36	PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21	30	3.6
37	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	29	4.7
38	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	29	4.7
39	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	29	4.7
40	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	29	4.7
41	CDSN_PANTR (Q7YR44) Corneodesmosin precursor (S protein)	29	4.7
42	CDSN_HUMAN (Q15517) Corneodesmosin precursor (S protein)	29	4.7
43	LPXD_BORBR (Q7WJ84) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	29	4.7
44	IF2_SYNEL (Q8DK04) Translation initiation factor IF-2	29	4.7
45	SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2...	29	4.7
46	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	29	6.2
47	BORG3_HUMAN (Q6NZY7) Cdc42 effector protein 5 (Binder of Rho GTP...	29	6.2
48	NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14....	29	6.2
49	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	29	6.2
50	Y309_HALSA (Q9HSB8) Putative aldolase Vng0309c (EC 4.2.1.-)	29	6.2
51	TCEA2_HUMAN (Q15560) Transcription elongation factor A protein 2...	29	6.2
52	CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor	29	6.2
53	TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box prote...	29	6.2
54	IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein,...	29	6.2
55	PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacema...	29	6.2
56	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	28	8.1
57	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	28	8.1
58	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	28	8.1
59	YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5	28	8.1
60	SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ...	28	8.1
61	GAK10_HUMAN (P87889) HERV-K_5q33.3 provirus ancestral Gag polypr...	28	8.1
62	CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antige...	28	8.1
63	YNA1_CAEEL (P34496) Hypothetical protein PAR2.1 in chromosome III	28	8.1
64	SRF_DROME (Q24535) Serum response factor homolog (dSRF) (Protein...	28	8.1
65	TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorti...	28	8.1
66	PLXB2_HUMAN (O15031) Plexin-B2 precursor (MM1)	28	8.1
67	HAIR_MOUSE (Q61645) Protein hairless	28	8.1
68	CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor	28	8.1
69	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	28	8.1
70	CJ047_HUMAN (Q86WR7) Protein C10orf47	28	8.1

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
 Frame = -3

Query: 361 P*GPPARQLP--CASQVSKPVDSHA-CQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGY 191
           P GP  R  P  CA     P      C+ P    + G  G  AG C     G   SARG 
Sbjct: 119 PGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGA 178

Query: 190 WPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
             C  R   A        PT   T  +PS AA
Sbjct: 179 PLCSYRTSCAGSCGARTAPTPAPTCASPSAAA 210

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>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin) (GP100)
          Length = 862

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 187 PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHP 41
           P     P  P A G   P+  TT+ TPS +   Q P     G  AGP P
Sbjct: 459 PPSTESPTPPEAGGTTGPSSNTTLETPSTSGTSQGPATTSSGGSAGPFP 507

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 26/95 (27%), Positives = 31/95 (32%)
 Frame = -3

Query: 301 SHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPT 122
           S A +      Q  +DG P    +    G R    G        P    APG WPP +P 
Sbjct: 659 SQAAEASHQAAQSDTDGPPGQGANGSHAGDRQRQHGPTQPDYGAPPGWHAPG-WPPQQPP 717

Query: 121 TVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQA 17
               P      Q P+         P P PS   QA
Sbjct: 718 DYWYPPEQQPSQSPY--------WPQPAPSYPGQA 744

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>TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box protein 18)|
          Length = 607

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +3

Query: 141 QSPGALGASGCRRRHGQYPRAERRVPRGTALQRPAGSPSDPS---CNTDQGV*HACESTG 311
           ++ GA+   GC R  G   +       G AL  PAG+ S P+    + ++G    CE  G
Sbjct: 45  EAAGAVDDGGCSRGGGAGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCED-G 103

Query: 312 FETWDAQGS*RAGGPHG 362
           F+   +  +   G P G
Sbjct: 104 FQQGASPLASPGGSPKG 120

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>MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 831

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -3

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHP 41
           R R P  P A G   P+  TT+  P  +   Q P     G   GP P
Sbjct: 457 RERTPTPPEAGGTTGPSSNTTMEAPLTSGTSQRPATTSSGGSVGPFP 503

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>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
 Frame = +3

Query: 81  GSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGQYPRAERRVPRGTALQR------- 239
           G   +  R G   + G VG  +PG  GASG R   G    +    PRG+  +R       
Sbjct: 670 GDTGNTGRDGARGIPGAVG--APGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG 727

Query: 240 ------PAGSPSDPSCNTDQGV*HACESTGFETWDAQGS*RAGGPHGPHRWP 377
                 PAG+   P    ++G        G       GS  A GP GP+  P
Sbjct: 728 PNGFAGPAGAAGQPGAKGEKGTKGPKGENGIV--GPTGSVGAAGPSGPNGPP 777

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>PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 889

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 30/109 (27%), Positives = 44/109 (40%)
 Frame = -3

Query: 334 PCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPR 155
           PC+S  +        +TP + L++ SD  PA   + +P+ T        P        P+
Sbjct: 464 PCSSPSTISPPKGCPRTP-TTLREASD--PATPSNFLPKKT--------PLGEEMTPPPK 512

Query: 154 APGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQALFD 8
            P L+ P  PT+  TP       EP   R  R   P   P+R+   L D
Sbjct: 513 PPRLYLPQEPTSEETPRTKRPHMEP---RTRRGPSPPASPTRKPPRLQD 558

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = -3

Query: 349 PARQLPCAS-QVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRR 173
           P++  P A  + + P  S A + P +  Q  +   PA   S  PR T     G  P  R 
Sbjct: 83  PSQAAPAAGDRAAAPRPSAAPKAP-AAQQPAAPSAPAPAPSQGPRPTP----GPKPAPRP 137

Query: 172 QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPG 62
            P AP      PP  P    TP+ A    +P   RPG
Sbjct: 138 APAAPEFTA--PPAAPAAPSTPAPAPSGPKPGGARPG 172

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>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor|
          Length = 680

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
 Frame = +3

Query: 120 VVGRVGGQSP-GALGASGCRRRHGQY-PRAERRVPRGTALQRPAGSPSDPSCNTDQGV*H 293
           V G  G + P G +GA G    +G+  PR E  +P       P G P  P    D G   
Sbjct: 414 VGGTPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPGTRGPTGPPGVPGFPGSKGDPGNPG 473

Query: 294 ACESTGFETWDAQGS*RAGGPHGP 365
           A    G  T    G     GP GP
Sbjct: 474 APGPAGIATKGLNGPTGPPGPPGP 497

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>EZ3_MAIZE (Q8S4P4) Polycomb protein EZ3 (Enhancer of zeste protein 3)|
          Length = 895

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -3

Query: 427 GSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGE 248
           G  ++C N     K R G  C      +RQ PC +  S+  D   C+  W    DGS GE
Sbjct: 674 GCSKSCKN-----KFR-GCHCAKSQCRSRQCPCFA-ASRECDPDVCRNCWVSCGDGSLGE 726

Query: 247 PAGR 236
           P  R
Sbjct: 727 PPAR 730

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>EZ2_MAIZE (Q8S4P5) Polycomb protein EZ2 (Enhancer of zeste protein 2)|
          Length = 894

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -3

Query: 427 GSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGE 248
           G  ++C N     K R G  C      +RQ PC +  S+  D   C+  W    DGS GE
Sbjct: 673 GCSKSCKN-----KFR-GCHCAKSQCRSRQCPCFA-ASRECDPDVCRNCWVSCGDGSLGE 725

Query: 247 PAGR 236
           P  R
Sbjct: 726 PLAR 729

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>TES_MOUSE (P47226) Testin (TES1/TES2)|
          Length = 423

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 241 LRAPHPTRLVTRTKESDMRASR-RVLKPGMRKEADEREALTGRTAGRP*SSVKGS 402
           + A HPTRL TRTKES+  AS+  V KP    E +  E    R   R  + VK S
Sbjct: 1   MSATHPTRLGTRTKESNACASQGLVRKPPWANEGEGFELHFWRKICRNCNVVKKS 55

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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
 Frame = -3

Query: 445 HSSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQ 266
           H  P+ G R   S++  ++  ++ +   P   P    P A+++  PV     Q+P +   
Sbjct: 424 HKKPTSGRRLPLSSTTDTEDDQLPRTHVPPHRP----PSAARLPPPVIPIPHQSPPA--- 476

Query: 265 DGSDGEPAGRCSAVPRGT---RLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                 PA   +  P  T   RL  +   P  +  P  P+ P   P   PT    P+   
Sbjct: 477 -SPTPHPAPVSTIAPSVTPSPRLPLQIPIPLPQAAPSNPKIPLTTPSPSPTAAAAPTTTT 535

Query: 94  DQQEPFRIRPGRIAGPHPLP 35
               P + +P + A P P P
Sbjct: 536 LSPPPTQQQPPQSAAPAPSP 555

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 34/122 (27%), Positives = 41/122 (33%)
 Frame = -3

Query: 397 PSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPR 218
           P Q+    Q+  P  PP +Q P   Q SKPV     Q P S    G    P    SA P 
Sbjct: 76  PPQQPPPHQQPPPHQPPHQQPPPPPQESKPV---VPQGPGSA--PGVSSAPPPAVSAPPA 130

Query: 217 GTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPL 38
                     P     P  P      PP  P+T   P   +         P +  GP P 
Sbjct: 131 N---------PPTTGAPPGPGPTPTPPPAVPSTAPGPPPPSTPSSGVSTTPPQTGGPPPP 181

Query: 37  PS 32
           P+
Sbjct: 182 PA 183

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 2 (SWI/SNF complex 170
            kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
 Frame = -3

Query: 352  PPARQLPCASQVSKPVDSHACQTPWSVLQD--GSDGEPAGRCSAVPRGTRLSARGYWPCR 179
            P ++ +P       P        P SV+    GS   P     +   G   S  G    +
Sbjct: 967  PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP---Q 1023

Query: 178  RRQPEAPRAPGLWPP-TRPTTVHTPSRAADQQEPFRIRPGRIAGP-HP 41
            ++QP     PG  PP   P   H PS   +QQ P  + PG + G  HP
Sbjct: 1024 QQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1071

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 33/118 (27%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
 Frame = -3

Query: 442  SSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPV--DSHACQTPWSVL 269
            S P+ G  Q  S S   Q   V     P GPP    P     S P    S + Q P S  
Sbjct: 1011 SHPTTGLHQVPSQSPFPQHPFV-----PGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAA 1065

Query: 268  QDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                   P      +P    +  +        +PE+P  P   P   PT V TPS A+
Sbjct: 1066 VSSGGSVPGAPSCPLPA---VQIKEEALDEAEEPESPPPPPRSPSPEPTVVDTPSHAS 1120

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>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 116 PHPEPSGGPARAVPHTA--GAHRRPPSASLPA 27
           P P P    A A P TA  G  R+PP AS PA
Sbjct: 38  PPPGPGAASASAAPPTASPGPERKPPPASAPA 69

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>COTE1_HUMAN (P81408) COTE1 protein|
          Length = 669

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 33/116 (28%), Positives = 41/116 (35%), Gaps = 6/116 (5%)
 Frame = -3

Query: 367 CGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYW 188
           CG  GP   + P   +  +   S++C  P +         P G  +A     RL     W
Sbjct: 381 CGLRGP-FEESPLPRRPPRAARSYSCSAPEAP-------PPLGAPTAARSCHRLEGWPPW 432

Query: 187 --PC----RRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPL 38
             PC    RRR P     P   PPTR  T      +     P   RP   A P PL
Sbjct: 433 VGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGH-RPPHPASPPPL 487

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 9/137 (6%)
 Frame = -1

Query: 429 SGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRF------QNPSTR---THVRLLG 277
           S P ++  +    RRS S S   R+G P        R        +PS R   +H     
Sbjct: 631 SPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRDSPSPRPRASHTSSSP 690

Query: 276 PCYKTGRMGSPQAVAAQCPEGHAFRRAGTGHVDDGNXXXXXXXXXXXXXXRQQSTPRAER 97
           P  + G   SPQ   +  P     RR                            +PR+ R
Sbjct: 691 PPLRRGASASPQRRQSPSPSTRPIRRVSR-------------TPEPKKTKASTPSPRSAR 737

Query: 96  RTSKSRSAYGRGASPAP 46
           R S SRSA G    PAP
Sbjct: 738 RVSSSRSASG-SPEPAP 753

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>EPN3_MOUSE (Q91W69) Epsin-3 (EPS-15-interacting protein 3)|
          Length = 636

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 28/105 (26%), Positives = 36/105 (34%)
 Frame = -3

Query: 406 NSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSA 227
           N+ PS     G   GP   P   +P  + +S+         PW +L   S  EP GR   
Sbjct: 325 NTEPS-----GSSWGPSADPWSPVPSGNALSR-------SQPWDLLPTLSSSEPWGRTPV 372

Query: 226 VPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAAD 92
           +P G                  P     W P+ PT    PS  AD
Sbjct: 373 LPSG------------------PPIADPWAPSSPTR-KLPSTGAD 398

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>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/91 (27%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
 Frame = -3

Query: 361  P*GPPARQLPCASQVSKPV--DSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYW 188
            P GPP    P     S P    S + Q P S         P      +P    +  +   
Sbjct: 1033 PGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSGGNVPGAPSCPLPA---VQIKEEA 1089

Query: 187  PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                 +PE+P  P   P   PT V TPS A+
Sbjct: 1090 LDEAEEPESPPPPPRSPSPEPTVVDTPSHAS 1120

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
 Frame = -3

Query: 325 SQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPG 146
           +Q  +P+ + A   P     D +D   A   SA PR  R         +R+ P   R PG
Sbjct: 694 NQSLRPLLAAAASAP-----DAADALAAAAASAAPREGR---------KRKSPGPARPPG 739

Query: 145 LWPPTRPTT----VHTPSRAADQQEPFRIRPGRIAGPHPLPSR 29
              P  P T       P   A    P    P    GP P P++
Sbjct: 740 GGGPRPPKTKKSGADAPGSDARAPLPAPAPPSTPPGPEPAPAQ 782

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>CS016_HUMAN (Q8ND99) Protein C19orf16|
          Length = 567

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 38/127 (29%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
 Frame = -3

Query: 379 VGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSA 200
           +G   GP GPP    PC    S PV S  C+ P+ V Q       + +  AVP  +    
Sbjct: 41  MGSHQGP-GPP----PCQKAPSGPVTS--CKAPFLVDQ-------SQKLPAVPASS---- 82

Query: 199 RGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSR------AADQQEPFRIRPGRIAGPHPL 38
              W    + P     PGL PP +      P R      A  Q+ P    P + A   P 
Sbjct: 83  ---W----KPP-----PGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPA 130

Query: 37  PSRQFQA 17
           PSR+  A
Sbjct: 131 PSRKASA 137

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>CBPA_DICDI (P35085) Calcium-binding protein|
          Length = 467

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 175 RQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQ 20
           +QP AP APG +PP +P         A  Q P + +PG+   P   P +  Q
Sbjct: 65  QQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQ-QPGQPGYPPQQPGQSGQ 115

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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 30/112 (26%), Positives = 47/112 (41%)
 Frame = -3

Query: 352  PPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRR 173
            PPA+  P A + ++ ++  A Q       + ++G P GR      G++++  G    R  
Sbjct: 1948 PPAQPPPAAVEAARQIEREAQQQQHLYRANINNGMPPGRDGMGTPGSQMTPVGLNVPRPN 2007

Query: 172  QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQA 17
            Q   P    + PP +      P     QQ+P    PG    P P+ S Q QA
Sbjct: 2008 QVSGPVMSSM-PPGQWQQAPIP-----QQQPM---PGM---PRPVMSMQAQA 2047

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>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)|
          Length = 1244

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
 Frame = -3

Query: 247  PAGR---CSAVPRGTR--LSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQE 83
            P+GR   C +  + +R   + R   PC    P    + G WPP   T   TP  A  Q  
Sbjct: 824  PSGRRHHCRSKAKRSRHHQTPRPETPCYVSHPSPVPSSGPWPPPPAT---TPFPAVVQPY 880

Query: 82   PFRIRPGRIAGPHPLP 35
            P  +   R  GP PLP
Sbjct: 881  PLPVFSPR-GGPQPLP 895

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>LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 447 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 295
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

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>LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 447 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 295
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

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>METE_XYLFA (Q9PB72) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 758

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 4/94 (4%)
 Frame = -3

Query: 274 VLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
           VL D  D +P    +       L AR   P   R   A R   L P T       P R+ 
Sbjct: 361 VLADALDNKPEAETALTQTRQALEARRQSPKVHRPEVAQRLAALTPDTTQRNTAYPQRSQ 420

Query: 94  DQQEPFRI--RPGRIAG--PHPLPSRQFQALFDS 5
            QQ+   +   P    G  P  L  R+ +A F S
Sbjct: 421 AQQQTLNLPAYPTTTIGSFPQTLEVREARAQFKS 454

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>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
 Frame = +3

Query: 132 VGGQSPGALGASGCRRR----HGQYPRAERRVPRGTALQRPAGSPSDPSCNTDQGV*HAC 299
           +G +  GA G +G         G  P +E   P  T+   P G+  +P      G     
Sbjct: 618 LGSRGRGATGGAGDPGSPPPARGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVGPGEGVGL 677

Query: 300 ESTGFETWDAQGS*RAGGPH 359
             TG E    +G  RAG  H
Sbjct: 678 LGTGREGTSGRGGSRAGSQH 697

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>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)|
          Length = 687

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 110 PEPSGGPARAVPHTAGAHRRPPSASLP 30
           P+PS G   A  H++  H +PPS S P
Sbjct: 423 PQPSNGSREAGAHSSSNHAQPPSHSRP 449

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>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 33/105 (31%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
 Frame = +3

Query: 102 RLGVWTVVGRVGGQS-PGALGASGCRRRHGQYPRAERRVPRGTALQRPAGSPSDPSCNTD 278
           R G    VG  G    PG  G  G R   G         P GTA+  P G P  P     
Sbjct: 348 RPGTGVTVGEKGNMGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQ 407

Query: 279 QG--V*HACESTGFETWDAQ----GS*RAGGPHGPHRWPTLIFCE 395
           +G          GF   D Q    G     GP GPH  P+   CE
Sbjct: 408 KGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSDEICE 452

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHT-PSRAADQQEPFRIRPGRIAGPHPLPSRQF 23
           +++Q  AP AP    P +P T+   P+  A    P  + PG +  P P+P   F
Sbjct: 667 QQQQGTAPPAPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNF 720

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHT-PSRAADQQEPFRIRPGRIAGPHPLPSRQF 23
           +++Q  AP AP    P +P T+   P+  A    P  + PG +  P P+P   F
Sbjct: 666 QQQQGTAPPAPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNF 719

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>ENDX_PSEFL (Q9WVZ1) Extracellular endonuclease precursor (EC 3.1.21.-)|
          Length = 229

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = +1

Query: 187 ASTRAPKGVSLGALRCNGLRAPHPTRLVTRTKESDMRASRRVLKPGMRKEADEREALTGR 366
           A  +AP+  S        L AP  T      K +  R   +      RK A+  +A  G 
Sbjct: 17  AHAQAPRTFSEAKKVAWKLYAPQSTEFYCGCKYNGNRVDLKACGYVPRKNANRADASNGN 76

Query: 367 TAGRP*SSVKGSSWSTPVGTR 429
           T+ RP  S   +S   PVG +
Sbjct: 77  TSSRPGRSGISASAGKPVGAK 97

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>PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21|
          Length = 632

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = -2

Query: 119 SPHPEPSGGPARAVPHT--------AGAHRRPPSASLPA 27
           S HP PS G  RAV HT         GAH   P+A+  A
Sbjct: 515 SQHPVPSSGGTRAVGHTHFPLPGQSEGAHTTSPAAAAAA 553

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>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGQYPR----AERRVPRGTALQRPAGSPSDPSCNTDQG 284
           PGALG +G   + G+  R     ER +P    ++ PAG P  P     +G
Sbjct: 217 PGALGPAGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRG 266

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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGQYPR----AERRVPRGTALQRPAGSPSDPSCNTDQG 284
           PGA+G SG   + G+  R     ER +P    ++ PAG P  P     +G
Sbjct: 217 PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 266

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = -3

Query: 229 AVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTR-----PTTVHTPSRAADQQEPFRIRP 65
           A P G     RG  P   R+P  P   G  PP       PT +++PS        +   P
Sbjct: 149 APPSGGHTPPRGQHPPSHRRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPP 208

Query: 64  GRIAGPHPLP 35
                P P P
Sbjct: 209 PTHVQPTPSP 218

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGQYPR----AERRVPRGTALQRPAGSPSDPSCNTDQG 284
           PGA+G SG   + G+  R     ER +P    ++ PAG P  P     +G
Sbjct: 218 PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 267

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>CDSN_PANTR (Q7YR44) Corneodesmosin precursor (S protein)|
          Length = 529

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
 Frame = -3

Query: 442 SSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSV-LQ 266
           S P  GS  + S+S  S KI +              PC S+ S     H C +  S+ L 
Sbjct: 424 SPPGTGSFSSSSSSQSSGKIILQ-------------PCGSKSSS--SGHPCMSVSSLTLT 468

Query: 265 DGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTP 107
            G DG P    SA  +    S+ G  PCR  +    +   L P      V  P
Sbjct: 469 GGPDGSPHPDPSAGAKPCGSSSAGKIPCRSIRDILAQVKPLGPQLADPEVFLP 521

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>CDSN_HUMAN (Q15517) Corneodesmosin precursor (S protein)|
          Length = 529

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
 Frame = -3

Query: 442 SSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSV-LQ 266
           S P  GS  + S+S  S KI +              PC S+ S     H C +  S+ L 
Sbjct: 424 SPPGTGSFSSSSSSQSSGKIILQ-------------PCGSKSSS--SGHPCMSVSSLTLT 468

Query: 265 DGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTP 107
            G DG P    SA  +    S+ G  PCR  +    +   L P      V  P
Sbjct: 469 GGPDGSPHPDPSAGAKPCGSSSAGKIPCRSIRDILAQVKPLGPQLADPEVFLP 521

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>LPXD_BORBR (Q7WJ84) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 447 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 295
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGSEE---ISFLSNPRYQNQLATT 69

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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
 Frame = -3

Query: 259 SDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSR------- 101
           S   P  + +  P+ T+     +   R   PEAP+     PP RP     P+R       
Sbjct: 66  SKTSPPVKKAPAPQKTQQIVAVHTQPRSETPEAPKPQLQKPPARPQPPQAPTRPTPPAPV 125

Query: 100 AADQQEPFRIR-PGRIAGPHPLPSRQFQAL 14
           A    EP   + P   A P P P R    L
Sbjct: 126 APKPVEPVAAKPPAPPAKPEPTPPRPVPTL 155

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>SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2.7.11.1)|
           (Serine/arginine-rich protein-specific kinase 1)
           (SR-protein-specific kinase 1) (SFRS protein kinase 1)
          Length = 826

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = -3

Query: 280 WSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRR---QPEAPRAPGLWPPTRPTTVHT 110
           WS L+      P GR     R  RL+A   +P  RR   +   P  P LW      +   
Sbjct: 8   WSGLRHEGQWSP-GRGPGQRRELRLTAAVRFPDVRRPSTEVAPPHTPCLWAAGPRPSFRA 66

Query: 109 PSRAADQQEPFRIRPGRIAGP 47
            S A   +  F  RP R  GP
Sbjct: 67  SSGAGRSRPLFPARPARALGP 87

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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
 Frame = +3

Query: 48  GPAMRPGRMRNGSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHG----------QYP 197
           GP   PG +  G  + A+++         G   PG +G SG R   G          Q P
Sbjct: 135 GPPGPPGPLGLGGNF-ASQMSYGYDEKSAGVSVPGPMGPSGPRGLPGPPGAPGPQGFQGP 193

Query: 198 RAERRVPRGTALQRPAGSPSDPSCNTDQG 284
             E   P G+    P G P  P  N D G
Sbjct: 194 PGEPGEPGGSGPMGPPGPPGPPGKNGDDG 222

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>BORG3_HUMAN (Q6NZY7) Cdc42 effector protein 5 (Binder of Rho GTPases 3)|
          Length = 148

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = +3

Query: 48  GPAMRPGRMRNGSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGQYPRAERRVPRGT 227
           GPA    R   G+   +A LG +     VG +   A G +    RHG  P  E R P   
Sbjct: 8   GPAQPKKRPDRGALSISAPLGDFRHTLHVG-RGGDAFGDTSFLSRHGGGPPPEPRAP--- 63

Query: 228 ALQRPAGSPSDP 263
               PAG+P  P
Sbjct: 64  ----PAGAPRSP 71

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>NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSASL 33
           SP PEPS  PA A PH       P S +L
Sbjct: 32  SPAPEPSRAPAPATPHAPDHSPAPNSPTL 60

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
 Frame = -3

Query: 361  P*GPPARQLP-CASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWP 185
            P GPP    P C S  + P        P       S G  AG  S      ++       
Sbjct: 1041 PGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD 1100

Query: 184  CRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                +PE+P  P   P   PT V TPS A+
Sbjct: 1101 AE--EPESPPPPPRSPSPEPTVVDTPSHAS 1128

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>Y309_HALSA (Q9HSB8) Putative aldolase Vng0309c (EC 4.2.1.-)|
          Length = 265

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 450 SGIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSF 334
           +G + HL+      P +T  RR+G+   A R G   VSF
Sbjct: 71  AGYIVHLNASTTLGPDQTDKRRTGTVEDAVRAGADAVSF 109

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>TCEA2_HUMAN (Q15560) Transcription elongation factor A protein 2 (Transcription|
           elongation factor S-II protein 2) (Testis-specific S-II)
           (Transcription elongation factor TFIIS.l)
          Length = 299

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -3

Query: 280 WSVLQDGSDGEPA--GRCSAVPRGTRLSARGYWPCRRRQPEAPRAP 149
           W  L D SD +    GR   +P  +R ++    P R+R PE PRAP
Sbjct: 76  WKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKR-PELPRAP 120

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>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 13/112 (11%)
 Frame = +3

Query: 81  GSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGQYPRAERRVPRGTALQR------- 239
           G   +  R G     G +G  +PG  GASG R   G    +    PRG+  +R       
Sbjct: 670 GEIGNPGRDGARGAPGAIG--APGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG 727

Query: 240 ------PAGSPSDPSCNTDQGV*HACESTGFETWDAQGS*RAGGPHGPHRWP 377
                 PAGS   P    ++G        G       G   A GP GP+  P
Sbjct: 728 PNGFAGPAGSAGQPGAKGEKGTKGPKGENGIV--GPTGPVGAAGPSGPNGPP 777

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>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)|
          Length = 540

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/73 (28%), Positives = 26/73 (35%)
 Frame = -3

Query: 352 PPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRR 173
           PP + L  AS    P  SH   TP  +      G        +P  + LSA G   C  +
Sbjct: 468 PPTKWLAWASL--PPFSSHLDFTPPPLASKLRQGSSESSWGLLPLSSHLSANGGSLCLAK 525

Query: 172 QPEAPRAPGLWPP 134
               P  P  W P
Sbjct: 526 WGSQPSTPTSWGP 538

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>IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein, chloroplast|
           precursor
          Length = 330

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 166 EAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGR 59
           +A    GL+PP RPT   +PS ++++    RI P R
Sbjct: 4   KASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLR 39

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>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein|
           Rigui) (mPER) (M-Rigui)
          Length = 1291

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = -3

Query: 187 PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLP 35
           PC    P    + G WPP   T   TP  A  Q  P  +   R  GP PLP
Sbjct: 852 PCYVSHPSPVPSSGPWPPPPAT---TPFPAMVQPYPLPVFSPR-GGPQPLP 898

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>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPAPEPRGGKAKRSPSAAGSGGPPTPAA 98

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>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPAPEPRGGKAKRSPSAAGSGGPPTPAA 98

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>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPTPEPRGGKAKRSPSAAGSGGPPTPAA 98

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>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5|
          Length = 317

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
 Frame = +3

Query: 27  CREGSGWGPAMRPGRMR----NGSCWSAARLGVWTVVGRVG----GQSPGALGASGCRRR 182
           C +G+  GPA  PG       NG+  + A  G     G  G      SPG  GA G   R
Sbjct: 134 CPQGAP-GPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGR 192

Query: 183 HGQYPRAERRVPRGTALQRPAGSPSDP 263
            GQ  +  R +P  +    P G P  P
Sbjct: 193 PGQSGQRSRGLPGPSGRPGPQGPPGAP 219

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>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
            (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
            (SH3P12)
          Length = 1290

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 25/90 (27%), Positives = 36/90 (40%)
 Frame = -3

Query: 334  PCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPR 155
            P   ++ KP+  H  Q P S     S   PAG+ + +P            C   Q +   
Sbjct: 854  PLPFRLKKPLQQHPRQPPPS----DSSESPAGQKADLP------------CHDPQDQPHS 897

Query: 154  APGLWPPTRPTTVHTPSRAADQQEPFRIRP 65
            A     PTR ++ HT +R +   EP   RP
Sbjct: 898  AGKPQVPTRLSSRHTMARLSHNSEPPLDRP 927

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>GAK10_HUMAN (P87889) HERV-K_5q33.3 provirus ancestral Gag polyprotein (Gag|
           polyprotein) (HERV-K10 Gag protein) (HERV-K107 Gag
           protein) [Contains: Matrix protein; Capsid protein;
           Nucleocapsid protein]
          Length = 665

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 20/129 (15%)
 Frame = -3

Query: 334 PCASQVSKPVDSHACQT---PWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCR----- 179
           P  +Q ++ VD +  Q    P ++  +G   E  G   + PRGT     G  P R     
Sbjct: 137 PVMAQSTQNVDYNQLQEVIYPETLKLEGKGPELMGPSESKPRGTSPLPAGQVPVRLQPQK 196

Query: 178 ---RRQPEAPRAPGLWPPTRPTTVHTPSR---------AADQQEPFRIRPGRIAGPHPLP 35
                + + P A   WPP        P           A   + P+   P R   P   P
Sbjct: 197 QVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYHQPPTRRLNPMAPP 256

Query: 34  SRQFQALFD 8
           SRQ   L +
Sbjct: 257 SRQGSELHE 265

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>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog|
           (cTAGE-5 protein) (Meningioma-expressed antigen 6)
          Length = 779

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
 Frame = -3

Query: 175 RQPEAPRAPG------LWPPTRPTTVHTP------SRAADQQEPFRIRPGRIAGPHPLPS 32
           R  +APRAP        W   R  T H P        A  +Q+ F    GR++GP  L S
Sbjct: 559 RLSDAPRAPSDRSLSPPWEQDRRMTAHPPPGQPYSDPALQRQDRFYPNSGRLSGPAELRS 618

Query: 31  RQFQAL 14
               +L
Sbjct: 619 YNMPSL 624

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>YNA1_CAEEL (P34496) Hypothetical protein PAR2.1 in chromosome III|
          Length = 170

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 11/45 (24%)
 Frame = -1

Query: 336 FLAHPRFQNPSTRTH------VRLLG-----PCYKTGRMGSPQAV 235
           F   P+  NP  R H      V L+G     P YKTGR G P  +
Sbjct: 36  FAEKPQHHNPEQRRHAYSVNKVELVGGVALDPLYKTGRNGKPYLI 80

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>SRF_DROME (Q24535) Serum response factor homolog (dSRF) (Protein blistered)|
          Length = 449

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 271 LQDGSD--GEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRPTTVHTPSRA 98
           L D +D  G PA      P G  L   G  P  +R   A  AP   P  +  T+H+P  A
Sbjct: 23  LADPADMYGNPALGAGRPPSGGLLQNMGGVPPMQRPNPAAGAP---PAPQCQTLHSPQHA 79

Query: 97  ADQQE 83
           + QQ+
Sbjct: 80  SQQQQ 84

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>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1305

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -3

Query: 250 EPAGRCSAVPRGTRLSARGYWPCRR----RQPEAPRAPGLWPPTRPTTVHTPSRAADQQE 83
           +PAGRC  +PR   L+  G  P  R     + +A     L  PT PTT  TP+   ++++
Sbjct: 544 DPAGRC-LLPRPKSLA--GSSPSTRLLTLEEAQARTQGRLGTPTEPTTPKTPASPVERRK 600

Query: 82  PFRIRPGRIAG 50
             R    R  G
Sbjct: 601 RERAEKQRKPG 611

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>PLXB2_HUMAN (O15031) Plexin-B2 precursor (MM1)|
          Length = 1838

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 135 GGQSPGALGASGCRRRHGQYPRAERRVPRGTALQRPAG 248
           GG +PG+  +  C   H  YP   R   RGTA+ +  G
Sbjct: 352 GGHAPGSSKSFPCGSEHLPYPLGSRDGLRGTAVLQRGG 389

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>HAIR_MOUSE (Q61645) Protein hairless|
          Length = 1182

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
 Frame = -3

Query: 439 SPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVLQDG 260
           +P    +QAC +  PS    + QR G  G   +Q  C   +  P      + PW     G
Sbjct: 230 APGGHLQQACESEGPS----LHQRDGETGAGRQQNLCPVFLGYP--DTVPRAPWPSCPPG 283

Query: 259 SDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAPRAPGLWPPTRP---TTVHTPSRAAD 92
                 G   A P    L   GY   +   P  PR P   PPT P    + H P+R  D
Sbjct: 284 LV-HSLGNIWAGPGSNSL---GY---QLGPPATPRCPSPGPPTPPGGCCSSHLPAREGD 335

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>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
 Frame = +3

Query: 123 VGRVGGQSPGALGASGCRRRHGQY-PRAERRVPRGTALQRPAGSPSDPSCNTDQGV*HAC 299
           VG  G + P  +G  G   R G   P   R  P       P G   DP  N D+G  HA 
Sbjct: 459 VGPAGKEGP--MGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKG--HAG 514

Query: 300 ESTGFETWDAQGS*RAGGPHGP 365
            +         G+  A GP GP
Sbjct: 515 LAGARGAPGPDGNNGAQGPPGP 536

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>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
 Frame = -3

Query: 352 PPARQLPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRR 173
           PP    PC      P D  A Q P           PA + S  P    + A    P ++ 
Sbjct: 149 PPPPPSPCKPS---PPDQSAKQPP--------QPPPAKQPSPPPPPPPVKAPSPSPAKQP 197

Query: 172 QPEAP--RAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGP 47
            P  P  +AP   P T+P T   P     ++ P    P  +A P
Sbjct: 198 PPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYP 241

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>CJ047_HUMAN (Q86WR7) Protein C10orf47|
          Length = 435

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 337 LPCASQVSKPVDSHACQTPWSVLQDGSDGEPAGRCSAVPRGTRLSARGYWPCRRRQPEAP 158
           L  A ++S+ +  +   +P S  ++G  GE     +   RG R    G  P    QP+AP
Sbjct: 195 LVMAQKISERMAGNEALSPTSPFREGRPGEWR---TPAARGPRSGDPGPGPSHPAQPKAP 251

Query: 157 RAP 149
           R P
Sbjct: 252 RFP 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,706,122
Number of Sequences: 219361
Number of extensions: 1722803
Number of successful extensions: 7307
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 6393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7265
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result