ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRTZ_HORVU (P06293) Protein Z (Z4) (Major endosperm albumin) 77 1e-14
2IMA7_HUMAN (O60684) Importin alpha-7 subunit (Karyopherin alpha-6) 27 8.8
3IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-... 27 8.8

>PRTZ_HORVU (P06293) Protein Z (Z4) (Major endosperm albumin)|
          Length = 399

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 47/101 (46%), Positives = 55/101 (54%)
 Frame = +3

Query: 81  TDIRLSIAHQTRFALRLASAISSPSHAKGSSGNAAFSPXXXXXXXXXXXXXXXXXTRDQL 260
           TD+RLSIAHQTRFALRL SAIS  S+ + ++GN AFSP                 TRDQL
Sbjct: 7   TDVRLSIAHQTRFALRLRSAIS--SNPERAAGNVAFSP-LSLHVALSLITAGAAATRDQL 63

Query: 261 AATLGAAEKGDAEGLHXXXXXXXXXXXXXXSGAGGPRVAFA 383
            A LG    GDA+ L+              S  GGPR+AFA
Sbjct: 64  VAILGDGGAGDAKELNALAEQVVQFVLANESSTGGPRIAFA 104



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>IMA7_HUMAN (O60684) Importin alpha-7 subunit (Karyopherin alpha-6)|
          Length = 536

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 122 APPCLRHLLALPRQGILRQRC 184
           A PCL HLL+ P++ I ++ C
Sbjct: 337 ALPCLLHLLSSPKESIRKEAC 357



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>IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-5 subunit)|
          Length = 536

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 122 APPCLRHLLALPRQGILRQRC 184
           A PCL HLL+ P++ I ++ C
Sbjct: 337 ALPCLLHLLSSPKESIRKEAC 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,830,798
Number of Sequences: 219361
Number of extensions: 467671
Number of successful extensions: 1542
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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