>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 189    ggcgaagctgtcgccggaccactaccgcgcgacgtgcccgcgcgtggagtcgatcgtgcg 248
              ||||| |||||||||||| ||||||||  ||||||||||  ||||||||||  |||||||
Sbjct: 101112 ggcgaggctgtcgccggagcactaccggtcgacgtgccccggcgtggagtccgtcgtgcg 101053

                                   
Query: 249    gtcggccgtggccaggaaggt 269
              |||||  ||||| ||||||||
Sbjct: 101052 gtcggtggtggcgaggaaggt 101032

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 189      ggcgaagctgtcgccggaccactaccgcgcgacgtgcccgcgcgtggagtcgatcgtgcg 248
                ||||| |||||||||||| ||||||||  ||||||||||  ||||||||||  |||||||
Sbjct: 19381886 ggcgaggctgtcgccggagcactaccggtcgacgtgccccggcgtggagtccgtcgtgcg 19381827

                                     
Query: 249      gtcggccgtggccaggaaggt 269
                |||||  ||||| ||||||||
Sbjct: 19381826 gtcggtggtggcgaggaaggt 19381806

>dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L24, full
           insert sequence
          Length = 1213

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggcgaagctgtcgccggaccactaccgcgcgacgtgcccgcgcgtggagtcgatcgtgcg 248
           ||||| |||||||||||| ||||||||  ||||||||||  ||||||||||  |||||||
Sbjct: 164 ggcgaggctgtcgccggagcactaccggtcgacgtgccccggcgtggagtccgtcgtgcg 223

                                
Query: 249 gtcggccgtggccaggaaggt 269
           |||||  ||||| ||||||||
Sbjct: 224 gtcggtggtggcgaggaaggt 244

>tpe|BN000652.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx123 gene
           for class III peroxidase 123 precursor, exons 1-3
          Length = 2260

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggcgaagctgtcgccggaccactaccgcgcgacgtgcccgcgcgtggagtcgatcgtgcg 248
           ||||| |||||||||||| ||||||||  ||||||||||  ||||||||||  |||||||
Sbjct: 90  ggcgaggctgtcgccggagcactaccggtcgacgtgccccggcgtggagtccgtcgtgcg 149

                                
Query: 249 gtcggccgtggccaggaaggt 269
           |||||  ||||| ||||||||
Sbjct: 150 gtcggtggtggcgaggaaggt 170

>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 102    ggagcggcggggaaggggcggc 123
              ||||||||||||||||||||||
Sbjct: 109362 ggagcggcggggaaggggcggc 109383

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 102      ggagcggcggggaaggggcggc 123
                ||||||||||||||||||||||
Sbjct: 16491263 ggagcggcggggaaggggcggc 16491284

>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full
           insert sequence
          Length = 575

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 102 ggagcggcggggaaggggcggc 123
           ||||||||||||||||||||||
Sbjct: 64  ggagcggcggggaaggggcggc 85

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 102      ggagcggcggggaaggggcggc 123
                ||||||||||||||||||||||
Sbjct: 16499504 ggagcggcggggaaggggcggc 16499525

>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence
          Length = 208153

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     tgagctccagggccagggcca 100
              |||||||||||||||||||||
Sbjct: 194190 tgagctccagggccagggcca 194210

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 83      gctccagggccagggccatgg 103
               |||||||||||||||||||||
Sbjct: 2325864 gctccagggccagggccatgg 2325884

>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence
          Length = 204800

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     tgagctccagggccagggcca 100
              |||||||||||||||||||||
Sbjct: 154368 tgagctccagggccagggcca 154348

>ref|XM_880076.1| PREDICTED: Bos taurus similar to sine oculis homeobox homolog 5,
           transcript variant 2 (LOC513676), mRNA
          Length = 1746

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcggcggggaaggggcggct 124
           ||||||||||||||||||||
Sbjct: 499 gcggcggggaaggggcggct 480

>ref|XM_591403.2| PREDICTED: Bos taurus similar to sine oculis homeobox homolog 5,
           transcript variant 1 (LOC513676), mRNA
          Length = 2543

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcggcggggaaggggcggct 124
           ||||||||||||||||||||
Sbjct: 499 gcggcggggaaggggcggct 480

>ref|NM_175875.3| Homo sapiens sine oculis homeobox homolog 5 (Drosophila) (SIX5),
           mRNA
          Length = 3145

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcggcggggaaggggcggct 124
           ||||||||||||||||||||
Sbjct: 674 gcggcggggaaggggcggct 655

>ref|XM_808640.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509657.20) partial mRNA
          Length = 10443

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  ggagcggcggggaaggggcg 121
            ||||||||||||||||||||
Sbjct: 5981 ggagcggcggggaaggggcg 6000

>ref|XM_811214.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506613.130) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  ggagcggcggggaaggggcg 121
            ||||||||||||||||||||
Sbjct: 5987 ggagcggcggggaaggggcg 6006

>ref|XM_813798.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510197.110) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  ggagcggcggggaaggggcg 121
            ||||||||||||||||||||
Sbjct: 5981 ggagcggcggggaaggggcg 6000

>ref|XM_849979.1| PREDICTED: Canis familiaris similar to sine oculis homeobox homolog
           5 (LOC612242), mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcggcggggaaggggcggct 124
           ||||||||||||||||||||
Sbjct: 530 gcggcggggaaggggcggct 511

>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12
             Contains the C20orf127 locus for a metallothionein protein
             pseudogene, the MMP24 gene for matrix metalloproteinase 24
             (membrane-inserted), a novel gene, the ITGB4BP gene for
             integrin beta 4 binding protein, the C20orf120 gene for
             chromosome 20 open reading frame 120, the C20orf128 gene
             for chromosome 20 open reading frame 128, the 3' end of
             the C20orf44 gene for chromosome 20 open reading frame 44
             and three CpG islands, complete sequence
          Length = 150481

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccagggccagggccatggag 105
             ||||||||||||||||||||
Sbjct: 64397 ccagggccagggccatggag 64416

>gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 123070

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  agcggcggggaaggggcggc 123
            ||||||||||||||||||||
Sbjct: 8332 agcggcggggaaggggcggc 8313

>gb|AC074212.5| Homo sapiens chromosome 19 clone LLNLF-145F10, complete sequence
          Length = 40311

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gcggcggggaaggggcggct 124
             ||||||||||||||||||||
Sbjct: 29386 gcggcggggaaggggcggct 29405

>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence
          Length = 45572

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   gcggcggggaaggggcggct 124
             ||||||||||||||||||||
Sbjct: 40528 gcggcggggaaggggcggct 40509

>ref|XM_677830.1| PREDICTED: Danio rerio similar to synArfGEF (LOC555340), mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  ggggaaggggcggctgcttctgct 133
            |||||||||||||||||| |||||
Sbjct: 3100 ggggaaggggcggctgctgctgct 3077

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     ctccagggccagggccatgg 103
              ||||||||||||||||||||
Sbjct: 982064 ctccagggccagggccatgg 982045

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     agcggcggggaaggggcggc 123
               ||||||||||||||||||||
Sbjct: 1549744 agcggcggggaaggggcggc 1549725

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     ggagcggcggggaaggggcg 121
               ||||||||||||||||||||
Sbjct: 2322191 ggagcggcggggaaggggcg 2322172

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     gcggcggggaaggggcggct 124
               ||||||||||||||||||||
Sbjct: 8815952 gcggcggggaaggggcggct 8815971

>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473D02
          Length = 146185

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ggagcggcggggaaggggcg 121
             ||||||||||||||||||||
Sbjct: 69690 ggagcggcggggaaggggcg 69671

>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   ggggaaggggcggctgcttctgct 133
             |||||||||||||||||| |||||
Sbjct: 77392 ggggaaggggcggctgctgctgct 77369

>emb|AJ327641.1|HSA327641 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HA6C
          Length = 637

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gcggcggggaaggggcggct 124
           ||||||||||||||||||||
Sbjct: 71  gcggcggggaaggggcggct 90

>dbj|AK066886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088C17, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 agcggcggggaaggggcggc 123
           ||||||||||||||||||||
Sbjct: 502 agcggcggggaaggggcggc 521

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      gctccagggccagggccatg 102
               ||||||||||||||||||||
Sbjct: 1673712 gctccagggccagggccatg 1673731

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     agcggcggggaaggggcggc 123
               ||||||||||||||||||||
Sbjct: 1549744 agcggcggggaaggggcggc 1549725

>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183385

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   agcggcggggaaggggcggc 123
             ||||||||||||||||||||
Sbjct: 75988 agcggcggggaaggggcggc 76007

>emb|X84813.1|HSDMAHP H.sapiens DMAHP gene
          Length = 5800

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  gcggcggggaaggggcggct 124
            ||||||||||||||||||||
Sbjct: 1581 gcggcggggaaggggcggct 1562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,823,512
Number of Sequences: 3902068
Number of extensions: 1823512
Number of successful extensions: 43975
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43506
Number of HSP's gapped (non-prelim): 469
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)