ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 64 1e-10
2HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 60 1e-09
3HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 60 2e-09
4WRK33_ARATH (Q8S8P5) Probable WRKY transcription factor 33 (WRKY... 30 1.4
5P49_STRLI (P06108) Protein p49 30 1.4
6TRAI6_ECOLI (Q00191) Protein traI 30 1.8
7CDN2D_MOUSE (Q60773) Cyclin-dependent kinase 4 inhibitor D (p19-... 29 3.1
8TRAI5_ECOLI (Q00192) Protein traI 28 4.0
9ACTN4_RAT (Q9QXQ0) Alpha-actinin-4 (Non-muscle alpha-actinin 4) ... 28 5.3
10IF2_BORPA (Q7W9A5) Translation initiation factor IF-2 28 5.3
11IF2_BORBR (Q7WHG2) Translation initiation factor IF-2 28 6.9
12CD3E_FELCA (Q5R1Q1) T-cell surface glycoprotein CD3 epsilon chai... 27 9.0
13IF2_BORPE (Q7VYR2) Translation initiation factor IF-2 27 9.0
14Y861_METJA (Q58271) Hypothetical UPF0036 protein MJ0861 27 9.0

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
 Frame = +1

Query: 145 MKITVRGSTVVVPAEETPRLRLWNANPDLVV--PRFHTPSVYFFRRGAGEEE-----ADR 303
           M I ++ ST+V PAEETP   LW +N D+++  P  HT +V  +++    E+     +  
Sbjct: 1   MSIQIKQSTMVRPAEETPNKSLWLSNIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSM 60

Query: 304 YFDXXXXXXXXXXXXVPFYPMAGRLARDGD 393
           YFD            VPFYPMAGRL  +GD
Sbjct: 61  YFDANILIEALSKALVPFYPMAGRLKINGD 90



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +1

Query: 145 MKITVRGSTVVVPAEETPRLRLWNANPDLVV--PRFHTPSVYFFRRGAGEEE-----ADR 303
           M I ++ ST+V PAEETP   LW +  D+++  P  HT +V  +++    E+     +  
Sbjct: 1   MSIQIKQSTMVRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSM 60

Query: 304 YFDXXXXXXXXXXXXVPFYPMAGRLARDGD 393
           YFD            VP+YPMAGRL  +GD
Sbjct: 61  YFDANILIEALSKALVPYYPMAGRLKINGD 90



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +1

Query: 145 MKITVRGSTVVVPAEETPRLRLWNANPDLVV--PRFHTPSVYFFRRGAGEEE-----ADR 303
           M I ++ ST+V PAEETP   LW +  D+++  P  HT +V  +++    E+     +  
Sbjct: 1   MSIHIKQSTMVRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIQPSSSM 60

Query: 304 YFDXXXXXXXXXXXXVPFYPMAGRLARDGD 393
           YFD            VP+YPMAGRL  +GD
Sbjct: 61  YFDANILIEALSKALVPYYPMAGRLKINGD 90



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>WRK33_ARATH (Q8S8P5) Probable WRKY transcription factor 33 (WRKY DNA-binding|
           protein 33)
          Length = 512

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
 Frame = -2

Query: 218 AFHSRSRGVSSAGTTTVDPRTV------IFISADADLAGR-----QTTRRKKNERCTWNA 72
           +FH++S GVS+  TTT    T       IF S +     +     QT  R  N+  ++N 
Sbjct: 111 SFHTQSSGVSAPTTTTTTTTTTTTTNSSIFQSQEQQKKNQSEQWSQTETRPNNQAVSYNG 170

Query: 71  RGRSNGGDD*N 39
           R +  G D  N
Sbjct: 171 REQRKGEDGYN 181



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>P49_STRLI (P06108) Protein p49|
          Length = 469

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 3   SSPPRATKRPALILIIAAVASPTRVPRTSLVFLA 104
           S   RA +RP LI +  +VA PTR P    VF A
Sbjct: 322 SGTDRAPERPFLITVQPSVADPTRAPAGKHVFWA 355



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>TRAI6_ECOLI (Q00191) Protein traI|
          Length = 732

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 318 LRVEVAVRLLLPRAAPEEVDARGVEPRHDQVRVGVPQP 205
           +R+     +LLPR  P  V+ +G EP H  +R GV  P
Sbjct: 593 VRIAGGAEMLLPRDVPGHVEQQGAEPAH-ALRRGVSGP 629



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>CDN2D_MOUSE (Q60773) Cyclin-dependent kinase 4 inhibitor D (p19-INK4d)|
          Length = 166

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 306 VAVRLLLPRAAPEEVDARGVEPRHDQVRVG 217
           VA+ LL   A+P   DA G  P HD  R G
Sbjct: 56  VALELLKQGASPNVQDASGTSPVHDAARTG 85



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>TRAI5_ECOLI (Q00192) Protein traI|
          Length = 747

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 318 LRVEVAVRLLLPRAAPEEVDARGVEPRHDQVRVGVPQP 205
           +R+     +LLPR  P  V+ +G +P H  +R G+ +P
Sbjct: 606 VRIAGGSEVLLPRDVPRHVEQQGTQPDH-ALRRGISRP 642



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>ACTN4_RAT (Q9QXQ0) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 911

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = -1

Query: 126 GGQTDY*AQEK---RAMYVERAWEKQRRR 49
           GG  DY AQE    R + ++ AWEKQ+R+
Sbjct: 26  GGMGDYMAQEDDWDRDLLLDPAWEKQQRK 54



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>IF2_BORPA (Q7W9A5) Translation initiation factor IF-2|
          Length = 969

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = -1

Query: 342 LRQRPAHPLRVEVAVRLLLPRAAP-------EEVDARGVEPRHDQVRVGVPQPEP 199
           +++ PA P+R E AV        P       E V A   EP+ +Q      QPEP
Sbjct: 95  VKRDPAEPVRAEPAVETAAKPVEPPVAEAPAEPVAAPAAEPQPEQPAQAEAQPEP 149



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>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2|
          Length = 997

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
 Frame = -1

Query: 330 PAHPLRVEVAVRLLLPRAAP-------EEVDARGVEPRHDQVRVGVPQPEP 199
           PA P+R E AV        P       E V A   EP+ +Q      QPEP
Sbjct: 127 PAEPVRAEPAVETAAKPVEPPVAEAPAEPVAAPAAEPQSEQPAQAEAQPEP 177



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>CD3E_FELCA (Q5R1Q1) T-cell surface glycoprotein CD3 epsilon chain precursor|
          Length = 202

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 121 PARSASAEMKITVRGSTVVV--PAEETPRLRLWNANPDLV 234
           P  SASA  K+++ G+TVV+  P +       W  N DL+
Sbjct: 33  PQTSASARYKVSISGTTVVLTCPEDLGSESIKWERNGDLL 72



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>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2|
          Length = 997

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
 Frame = -1

Query: 330 PAHPLRVEVAVRLLLPRAAP-------EEVDARGVEPRHDQVRVGVPQPEP 199
           PA P+R E AV        P       E V A   EP+ +Q      QPEP
Sbjct: 127 PAEPVRAEPAVETAAKPVEPPVAEAPAEPVAAPAAEPQPEQPAQAEAQPEP 177



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>Y861_METJA (Q58271) Hypothetical UPF0036 protein MJ0861|
          Length = 448

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = +1

Query: 118 LPARSASAEMKITVRGSTVVVPAEE----TPRL-----RLWNANPDLVVPRFHTP 255
           L  R   +E K  VR   +V+ A E    TP +     R+ ++ PD V+P  HTP
Sbjct: 110 LVKREILSEKKFDVRNPLIVLNAGESIDLTPNITLEFIRITHSIPDSVLPVLHTP 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,307,171
Number of Sequences: 219361
Number of extensions: 785501
Number of successful extensions: 2214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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