ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
4emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 168 1e-38
5ref|XM_469523.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
6dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
7ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzy... 137 4e-29
8gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugati... 137 4e-29
9gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugati... 137 4e-29
10dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
11dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 131 2e-27
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
14gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 131 2e-27
15gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete s... 129 9e-27
16gb|AY104181.1| Zea mays PCO060230 mRNA sequence 127 3e-26
17gb|BT016303.1| Zea mays clone Contig136 mRNA sequence 125 1e-25
18gb|AY103581.1| Zea mays PCO136340 mRNA sequence 125 1e-25
19gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence 119 8e-24
20ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzy... 115 1e-22
21gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 m... 115 1e-22
22gb|AY107839.1| Zea mays PCO143146 mRNA sequence 115 1e-22
23gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugat... 109 8e-21
24gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme fa... 109 8e-21
25gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme ... 107 3e-20
26gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete ... 103 5e-19
27gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 103 5e-19
28dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone... 101 2e-18
29ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzy... 96 1e-16
30gb|AY093340.1| Arabidopsis thaliana similar to DNA binding prote... 96 1e-16
31gb|AY059896.1| Arabidopsis thaliana similar to DNA binding prote... 96 1e-16
32gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana... 96 1e-16
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
34dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
35dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
36ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzy... 92 2e-15
37gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, comple... 92 2e-15
38gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, comple... 92 2e-15
39emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Co... 92 2e-15
40gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete s... 92 2e-15
41gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma... 76 1e-10
42gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence 74 4e-10
43gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, part... 74 4e-10
44ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzy... 70 7e-09
45gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, pa... 70 7e-09
46emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA... 70 7e-09
47emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA... 70 7e-09
48ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
49dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
50ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzy... 66 1e-07
51gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A... 66 1e-07
52gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ub... 66 1e-07
53gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398)... 66 1e-07
54gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete se... 66 1e-07
55gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conj... 56 1e-04
56gb|AY191225.1| Aplysia californica nervous system adducin (ADD) ... 46 0.100
57gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.39
58gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, com... 42 1.6
59gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.6
60gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, com... 42 1.6
61emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.6
62emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chr... 42 1.6
63emb|AL137144.14| Human DNA sequence from clone RP11-210E23 on ch... 42 1.6
64gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
65dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 42 1.6
66gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, com... 40 6.2
67ref|NM_001030610.1| Gallus gallus similar to KIAA1191 protein (L... 40 6.2
68emb|AJ851782.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.2
69emb|CR407336.1| Gallus gallus finished cDNA, clone ChEST108o11 40 6.2
70gb|AC148667.1| Macaca mulatta Major Histocompatibility Complex B... 40 6.2
71dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
72dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
73dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 6.2
74dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.2
77gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 6.2
78gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 6.2
79emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
80emb|AL591864.14| Mouse DNA sequence from clone RP23-21H3 on chro... 40 6.2 
>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full
           insert sequence
          Length = 924

 Score =  287 bits (145), Expect = 2e-74
 Identities = 227/253 (89%), Gaps = 1/253 (0%)
 Strand = Plus / Plus

                                                                       
Query: 194 gtcgtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcattggg 253
           |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 232 gtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggt 291

                                                                       
Query: 254 gatggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctggaca 313
           |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 292 gatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggaca 351

                                                                       
Query: 314 ggaacaataattggtccccacaacactgtccacgagggccggatttatcagttgaagctt 373
           || ||||| ||||||||||| ||||||||||| ||||||||||| || ||  ||||||||
Sbjct: 352 ggcacaattattggtccccataacactgtccatgagggccggatataccaactgaagctt 411

                                                                       
Query: 374 ttctgtgacaaggactatccagacaggccaccgactgttaggtttcactcaagaatc-ac 432
           ||||| ||||||||||| |||||||||||||| ||||| |  ||||||||||||||| ||
Sbjct: 412 ttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatcaac 471

                        
Query: 433 atgacctgtgtaa 445
           |||||||||||||
Sbjct: 472 atgacctgtgtaa 484
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Minus

                                                                            
Query: 197      gtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcattggggat 256
                ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 25593373 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 25593314

                                                                            
Query: 257      ggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctggacagga 316
                ||| |||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| 
Sbjct: 25593313 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 25593254

                                 
Query: 317      acaataattggtcccca 333
                ||||| |||||||||||
Sbjct: 25593253 acaattattggtcccca 25593237



 Score =  113 bits (57), Expect = 5e-22
 Identities = 97/109 (88%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                            
Query: 338      actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
                |||||||| ||||||||||| || ||  ||||||||||||| ||||||||||| ||||||
Sbjct: 25593109 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 25593050

                                                                 
Query: 398      aggccaccgactgttaggtttcactcaagaatc-acatgacctgtgtaa 445
                |||||||| ||||| |  ||||||||||||||| |||||||||||||||
Sbjct: 25593049 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaa 25593001
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Minus

                                                                            
Query: 197      gtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcattggggat 256
                ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 25521549 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 25521490

                                                                            
Query: 257      ggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctggacagga 316
                ||| |||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| 
Sbjct: 25521489 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 25521430

                                 
Query: 317      acaataattggtcccca 333
                ||||| |||||||||||
Sbjct: 25521429 acaattattggtcccca 25521413



 Score =  113 bits (57), Expect = 5e-22
 Identities = 97/109 (88%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                            
Query: 338      actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
                |||||||| ||||||||||| || ||  ||||||||||||| ||||||||||| ||||||
Sbjct: 25521285 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 25521226

                                                                 
Query: 398      aggccaccgactgttaggtttcactcaagaatc-acatgacctgtgtaa 445
                |||||||| ||||| |  ||||||||||||||| |||||||||||||||
Sbjct: 25521225 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaa 25521177
to top
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                         
Query: 197   gtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcattggggat 256
             ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 80345 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 80404

                                                                         
Query: 257   ggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctggacagga 316
             ||| |||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| 
Sbjct: 80405 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 80464

                              
Query: 317   acaataattggtcccca 333
             ||||| |||||||||||
Sbjct: 80465 acaattattggtcccca 80481



 Score =  113 bits (57), Expect = 5e-22
 Identities = 97/109 (88%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                         
Query: 338   actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
             |||||||| ||||||||||| || ||  ||||||||||||| ||||||||||| ||||||
Sbjct: 80609 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 80668

                                                              
Query: 398   aggccaccgactgttaggtttcactcaagaatc-acatgacctgtgtaa 445
             |||||||| ||||| |  ||||||||||||||| |||||||||||||||
Sbjct: 80669 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaa 80717
to top
>ref|XM_469523.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score =  165 bits (83), Expect = 2e-37
 Identities = 176/207 (85%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||| 
Sbjct: 43  aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 102

                                                                       
Query: 266 agctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataatt 325
           ||||||||||||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct: 103 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 162

                                                                       
Query: 326 ggtccccacaacactgtccacgagggccggatttatcagttgaagcttttctgtgacaag 385
           || || |  || ||||| || ||||| || || |||||||||||| | |||||||| |  
Sbjct: 163 ggccctcctaatactgttcatgagggacgaatctatcagttgaagttgttctgtgataca 222

                                      
Query: 386 gactatccagacaggccaccgactgtt 412
           |||||||||||||| ||||| ||||||
Sbjct: 223 gactatccagacagaccacctactgtt 249
to top
>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full
           insert sequence
          Length = 790

 Score =  165 bits (83), Expect = 2e-37
 Identities = 176/207 (85%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||| 
Sbjct: 136 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 195

                                                                       
Query: 266 agctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataatt 325
           ||||||||||||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct: 196 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 255

                                                                       
Query: 326 ggtccccacaacactgtccacgagggccggatttatcagttgaagcttttctgtgacaag 385
           || || |  || ||||| || ||||| || || |||||||||||| | |||||||| |  
Sbjct: 256 ggccctcctaatactgttcatgagggacgaatctatcagttgaagttgttctgtgataca 315

                                      
Query: 386 gactatccagacaggccaccgactgtt 412
           |||||||||||||| ||||| ||||||
Sbjct: 316 gactatccagacagaccacctactgtt 342
to top
>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.1 mRNA, complete cds
          Length = 837

 Score =  137 bits (69), Expect = 4e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           ||||||| ||||||||  | |||||||| || ||||| |||||||| || ||||||||||
Sbjct: 234 tgctggaggagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaa 293

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| | |||||| || || |||||||| ||||| || || || || ||||| ||||
Sbjct: 294 tggatgatggagatgacatttatatgcgctcttggactggcactatcatcggtcctcaca 353

                                                            
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
           ||||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 354 acactgtacatgagggtcggatttatcagttgaagctcttctgtgacaa 402
to top
>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060) mRNA, complete cds
          Length = 531

 Score =  137 bits (69), Expect = 4e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           ||||||| ||||||||  | |||||||| || ||||| |||||||| || ||||||||||
Sbjct: 50  tgctggaggagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaa 109

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| | |||||| || || |||||||| ||||| || || || || ||||| ||||
Sbjct: 110 tggatgatggagatgacatttatatgcgctcttggactggcactatcatcggtcctcaca 169

                                                            
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
           ||||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 170 acactgtacatgagggtcggatttatcagttgaagctcttctgtgacaa 218
to top
>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060; F11F19.3) mRNA, complete cds
          Length = 769

 Score =  137 bits (69), Expect = 4e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           ||||||| ||||||||  | |||||||| || ||||| |||||||| || ||||||||||
Sbjct: 168 tgctggaggagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaa 227

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| | |||||| || || |||||||| ||||| || || || || ||||| ||||
Sbjct: 228 tggatgatggagatgacatttatatgcgctcttggactggcactatcatcggtcctcaca 287

                                                            
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
           ||||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 288 acactgtacatgagggtcggatttatcagttgaagctcttctgtgacaa 336
to top
>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full
           insert sequence
          Length = 833

 Score =  135 bits (68), Expect = 1e-28
 Identities = 179/216 (82%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           |||| |||||||||||  | || || ||||||||||| |||||||| || ||||||||||
Sbjct: 117 tgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaa 176

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| |||||||| ||||||||||| || ||||| || || || |||||||| || |
Sbjct: 177 tggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacata 236

                                                                       
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccag 395
           | | |||||| || || || || || ||| ||||||| ||||||||||||||||| ||||
Sbjct: 237 atagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccag 296

                                               
Query: 396 acaggccaccgactgttaggtttcactcaagaatca 431
           | | ||||||  ||||  ||||||| ||||||||||
Sbjct: 297 agaagccaccatctgtccggtttcattcaagaatca 332
to top
>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full
           insert sequence
          Length = 853

 Score =  135 bits (68), Expect = 1e-28
 Identities = 179/216 (82%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           |||| |||||||||||  | || || ||||||||||| |||||||| || ||||||||||
Sbjct: 168 tgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaa 227

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| |||||||| ||||||||||| || ||||| || || || |||||||| || |
Sbjct: 228 tggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacata 287

                                                                       
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccag 395
           | | |||||| || || || || || ||| ||||||| ||||||||||||||||| ||||
Sbjct: 288 atagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccag 347

                                               
Query: 396 acaggccaccgactgttaggtttcactcaagaatca 431
           | | ||||||  ||||  ||||||| ||||||||||
Sbjct: 348 agaagccaccatctgtccggtttcattcaagaatca 383
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                            
Query: 206      aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
                |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||| 
Sbjct: 28490516 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 28490575

                                                                            
Query: 266      agctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataatt 325
                ||||||||||||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct: 28490576 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 28490635

                  
Query: 326      gg 327
                ||
Sbjct: 28490636 gg 28490637



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 338      actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
                ||||| || ||||| || || |||||||||||| | |||||||| |  ||||||||||||
Sbjct: 28490740 actgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagac 28490799

                               
Query: 398      aggccaccgactgtt 412
                || ||||| ||||||
Sbjct: 28490800 agaccacctactgtt 28490814
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                            
Query: 206      aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
                |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||| 
Sbjct: 28581840 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 28581899

                                                                            
Query: 266      agctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataatt 325
                ||||||||||||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct: 28581900 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 28581959

                  
Query: 326      gg 327
                ||
Sbjct: 28581960 gg 28581961



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 338      actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
                ||||| || ||||| || || |||||||||||| | |||||||| |  ||||||||||||
Sbjct: 28582064 actgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagac 28582123

                               
Query: 398      aggccaccgactgtt 412
                || ||||| ||||||
Sbjct: 28582124 agaccacctactgtt 28582138
to top
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                         
Query: 206   aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
             |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||| 
Sbjct: 84646 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 84705

                                                                         
Query: 266   agctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataatt 325
             ||||||||||||||||| || ||||| || || ||||| |||||||||||||| || |||
Sbjct: 84706 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 84765

               
Query: 326   gg 327
             ||
Sbjct: 84766 gg 84767



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 338   actgtccacgagggccggatttatcagttgaagcttttctgtgacaaggactatccagac 397
             ||||| || ||||| || || |||||||||||| | |||||||| |  ||||||||||||
Sbjct: 84870 actgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagac 84929

                            
Query: 398   aggccaccgactgtt 412
             || ||||| ||||||
Sbjct: 84930 agaccacctactgtt 84944
to top
>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence
          Length = 798

 Score =  129 bits (65), Expect = 9e-27
 Identities = 128/149 (85%)
 Strand = Plus / Plus

                                                                       
Query: 236 ggagagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatc 295
           |||||||| || ||||| |||||||| || ||||||||||||||||| | |||||| || 
Sbjct: 230 ggagagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatt 289

                                                                       
Query: 296 tacatgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccgg 355
           || |||||||| ||||| || || || || ||||| ||||||||||| || ||||| |||
Sbjct: 290 tatatgcgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcgg 349

                                        
Query: 356 atttatcagttgaagcttttctgtgacaa 384
           ||||||||||||||||| |||||||||||
Sbjct: 350 atttatcagttgaagctcttctgtgacaa 378
to top
>gb|AY104181.1| Zea mays PCO060230 mRNA sequence
          Length = 1061

 Score =  127 bits (64), Expect = 3e-26
 Identities = 163/196 (83%)
 Strand = Plus / Plus

                                                                       
Query: 236 ggagagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatc 295
           ||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||| |||
Sbjct: 344 ggagagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatc 403

                                                                       
Query: 296 tacatgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccgg 355
           |||||||| || ||||| || || || ||||| || ||||| ||||| || ||||| || 
Sbjct: 404 tacatgcggtcatggactggtaccatcattggccctcacaatactgtacatgagggtcgc 463

                                                                       
Query: 356 atttatcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttagg 415
           || || ||| ||||| | || ||||||||||||||||| || | ||||||  |||| || 
Sbjct: 464 atctaccagctgaagttgttttgtgacaaggactatccggagaagccaccatctgtcaga 523

                           
Query: 416 tttcactcaagaatca 431
           || |||||||||||||
Sbjct: 524 ttccactcaagaatca 539
to top
>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence
          Length = 790

 Score =  125 bits (63), Expect = 1e-25
 Identities = 156/187 (83%)
 Strand = Plus / Plus

                                                                       
Query: 204 ggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacag 263
           ||||||| || || || |||||||||||  | ||||||||||||||||| ||||| ||||
Sbjct: 120 ggaacttcaggctcctagaagagcttgaacgtggagagaagggcattggagatgggacag 179

                                                                       
Query: 264 ttagctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataa 323
           | |||||||||||||||||||||||||| ||||||||||| || ||||| || || || |
Sbjct: 180 tgagctatggaatggatgacgcagatgacatctacatgcgatcatggactggcactatta 239

                                                                       
Query: 324 ttggtccccacaacactgtccacgagggccggatttatcagttgaagcttttctgtgaca 383
           |||| || || || || ||||| ||||| || || || ||| ||||| | ||||| ||||
Sbjct: 240 ttggccctcataataccgtccatgagggtcgcatctaccagctgaagttgttctgcgaca 299

                  
Query: 384 aggacta 390
           |||||||
Sbjct: 300 aggacta 306
to top
>gb|AY103581.1| Zea mays PCO136340 mRNA sequence
          Length = 1242

 Score =  125 bits (63), Expect = 1e-25
 Identities = 156/187 (83%)
 Strand = Plus / Plus

                                                                       
Query: 204 ggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacag 263
           ||||||| || || || |||||||||||  | ||||||||||||||||| ||||| ||||
Sbjct: 206 ggaacttcaggctcctagaagagcttgaacgtggagagaagggcattggagatgggacag 265

                                                                       
Query: 264 ttagctatggaatggatgacgcagatgatatctacatgcgctcctggacaggaacaataa 323
           | |||||||||||||||||||||||||| ||||||||||| || ||||| || || || |
Sbjct: 266 tgagctatggaatggatgacgcagatgacatctacatgcgatcatggactggcactatta 325

                                                                       
Query: 324 ttggtccccacaacactgtccacgagggccggatttatcagttgaagcttttctgtgaca 383
           |||| || || || || ||||| ||||| || || || ||| ||||| | ||||| ||||
Sbjct: 326 ttggccctcataataccgtccatgagggtcgcatctaccagctgaagttgttctgcgaca 385

                  
Query: 384 aggacta 390
           |||||||
Sbjct: 386 aggacta 392
to top
>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence
          Length = 822

 Score =  119 bits (60), Expect = 8e-24
 Identities = 162/196 (82%)
 Strand = Plus / Plus

                                                                       
Query: 236 ggagagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatc 295
           ||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||| |||
Sbjct: 225 ggagagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatc 284

                                                                       
Query: 296 tacatgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccgg 355
           |||||||| || ||||| || || || ||||| || ||||| ||||| || ||||| || 
Sbjct: 285 tacatgcggtcatggactggtaccatcattggccctcacaatactgtacatgagggtcgc 344

                                                                       
Query: 356 atttatcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttagg 415
           || || ||| ||||| | || |||||||| |||||||| || | ||||||  |||| || 
Sbjct: 345 atctaccagctgaagttgttttgtgacaaagactatccggagaagccaccatctgtcaga 404

                           
Query: 416 tttcactcaagaatca 431
           || |||||||||||||
Sbjct: 405 ttccactcaagaatca 420
to top
>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.2 mRNA, complete cds
          Length = 840

 Score =  115 bits (58), Expect = 1e-22
 Identities = 144/172 (83%), Gaps = 3/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           ||||||| ||||||||  | |||||||| || ||||| |||||||| || ||||||||||
Sbjct: 234 tgctggaggagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaa 293

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| | |||||| || || |||||||| ||||| || || || || ||||| ||||
Sbjct: 294 tggatgatggagatgacatttatatgcgctcttggactggcactatcatcggtcctcaca 353

                                                               
Query: 336 ac---actgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
           ||   ||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 354 acgtaactgtacatgagggtcggatttatcagttgaagctcttctgtgacaa 405
to top
>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds
          Length = 818

 Score =  115 bits (58), Expect = 1e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                       
Query: 219 tggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaatgg 278
           ||||||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 157 tggaagagcttgagagaggtgagaagggaattggagatggaactgtaagctatggaatgg 216

                                                                 
Query: 279 atgacgcagatgatatctacatgcgctcctggacaggaacaataattggtcccc 332
           |||| || ||||||||||||||||  || ||||| || ||||| || |||||||
Sbjct: 217 atgatgctgatgatatctacatgcaatcatggactgggacaattataggtcccc 270
to top
>gb|AY107839.1| Zea mays PCO143146 mRNA sequence
          Length = 1245

 Score =  115 bits (58), Expect = 1e-22
 Identities = 181/222 (81%)
 Strand = Plus / Plus

                                                                       
Query: 190 agttgtcgtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcat 249
           ||||||||| || || |||||||| ||||| ||||| || ||  | || |||||||||||
Sbjct: 249 agttgtcgttcccagaaactttaggctgctagaagaactagaacgtggtgagaagggcat 308

                                                                       
Query: 250 tggggatggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctg 309
           ||| |||||||| || |||||||| ||||| || || ||||| || |  ||||| |||||
Sbjct: 309 tggtgatggaactgtgagctatgggatggacgatgctgatgacatatttatgcggtcctg 368

                                                                       
Query: 310 gacaggaacaataattggtccccacaacactgtccacgagggccggatttatcagttgaa 369
           ||||||||| || |||||||| | ||||||||| |||||||| || || |||||||| ||
Sbjct: 369 gacaggaactatcattggtcctcccaacactgttcacgagggacgaatctatcagttaaa 428

                                                     
Query: 370 gcttttctgtgacaaggactatccagacaggccaccgactgt 411
           ||| || ||||| |  || |||||||| |  |||||||||||
Sbjct: 429 gctgttttgtgatacagattatccagataaaccaccgactgt 470
to top
>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family
           protein-like mRNA, complete cds
          Length = 682

 Score =  109 bits (55), Expect = 8e-21
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           |||||||| ||||| ||||| ||||| |||||||| |||||||| | ||||||||| || 
Sbjct: 178 gagaagggtattggagatgggacagtgagctatggtatggatgatggagatgatatttat 237

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || |||||||| |||||  |||| || || ||||| |||
Sbjct: 238 atgcgttcttggactggcaccattattggtcctcacaattctgtgcatgaaggccgcatt 297

                                              
Query: 359 tatcagttgaagcttttctgtgacaaggactatcc 393
           |||||||||||||| ||||| |||||||| |||||
Sbjct: 298 tatcagttgaagctattctgcgacaaggattatcc 332
to top
>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like
           protein mRNA, complete cds
          Length = 764

 Score =  109 bits (55), Expect = 8e-21
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           |||||||| ||||| ||||| ||||| |||||||| |||||||| | ||||||||| || 
Sbjct: 170 gagaagggtattggagatgggacagtgagctatggtatggatgatggagatgatatttat 229

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || |||||||| |||||  |||| || || ||||| |||
Sbjct: 230 atgcgttcttggactggcaccattattggtcctcacaattctgtgcatgaaggccgcatt 289

                                              
Query: 359 tatcagttgaagcttttctgtgacaaggactatcc 393
           |||||||||||||| ||||| |||||||| |||||
Sbjct: 290 tatcagttgaagctattctgcgacaaggattatcc 324
to top
>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein
           mRNA, complete cds
          Length = 607

 Score =  107 bits (54), Expect = 3e-20
 Identities = 123/146 (84%)
 Strand = Plus / Plus

                                                                       
Query: 248 attggggatggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcc 307
           ||||| |||||||  || || ||||| |||||||| | ||||||||| || ||||| || 
Sbjct: 186 attggagatggaagtgtcagttatggtatggatgatggagatgatatatatatgcgttct 245

                                                                       
Query: 308 tggacaggaacaataattggtccccacaacactgtccacgagggccggatttatcagttg 367
           |||||||| |||||||||||||| ||||| ||||| || |||||||| ||||||||  ||
Sbjct: 246 tggacaggcacaataattggtcctcacaatactgtacatgagggccgcatttatcaactg 305

                                     
Query: 368 aagcttttctgtgacaaggactatcc 393
           ||||| ||||||||||| || |||||
Sbjct: 306 aagctcttctgtgacaaagattatcc 331
to top
>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence
          Length = 152779

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                          
Query: 219    tggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaatgg 278
              |||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 105553 tggaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatgg 105494

                              
Query: 279    atgacgcagatgatat 294
              ||||||| ||||||||
Sbjct: 105493 atgacgctgatgatat 105478
to top
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                        
Query: 219  tggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaatgg 278
            |||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 2885 tggaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatgg 2826

                            
Query: 279  atgacgcagatgatat 294
            ||||||| ||||||||
Sbjct: 2825 atgacgctgatgatat 2810
to top
>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b,
             complete sequence
          Length = 78574

 Score =  101 bits (51), Expect = 2e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                         
Query: 219   tggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaatgg 278
             |||||||||||||| |||| |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 75157 tggaagagcttgagcgaggtgagaagggaattggagatggaactgtaagctatggaatgg 75098

                                                        
Query: 279   atgacgcagatgatatctacatgcgctcctggacaggaacaat 321
             | ||||| |||||||| |||||||  || ||||| ||||||||
Sbjct: 75097 acgacgctgatgatatatacatgcagtcatggactggaacaat 75055



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 359   tatcagttgaagcttttctgtgacaaggactatccaga 396
             ||||||||||| || || |||| |||||||||||||||
Sbjct: 74483 tatcagttgaaactgttttgtggcaaggactatccaga 74446
to top
>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G23260 mRNA, complete cds
          Length = 772

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 203 aggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaaca 262
           |||||||||||| || ||||||||||||| ||||| ||||| || ||||| ||||| || 
Sbjct: 148 aggaactttagattgttggaagagcttgaaagaggtgagaaaggtattggagatggtact 207

                                           
Query: 263 gttagctatggaatggatgacgcagatgatat 294
           |||||||||||||||||||| || ||||||||
Sbjct: 208 gttagctatggaatggatgatgctgatgatat 239



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 361 tcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtt 417
           |||| |||||||||||||||  ||||| || || || || ||||||||||| |||||
Sbjct: 306 tcagctgaagcttttctgtggtaaggagtaccctgaaagtccaccgactgtgaggtt 362
to top
>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260)
           mRNA, complete cds
          Length = 618

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 203 aggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaaca 262
           |||||||||||| || ||||||||||||| ||||| ||||| || ||||| ||||| || 
Sbjct: 34  aggaactttagattgttggaagagcttgaaagaggtgagaaaggtattggagatggtact 93

                                           
Query: 263 gttagctatggaatggatgacgcagatgatat 294
           |||||||||||||||||||| || ||||||||
Sbjct: 94  gttagctatggaatggatgatgctgatgatat 125



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 361 tcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtt 417
           |||| |||||||||||||||  ||||| || || || || ||||||||||| |||||
Sbjct: 192 tcagctgaagcttttctgtggtaaggagtaccctgaaagtccaccgactgtgaggtt 248
to top
>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260;
           F26F24.10) mRNA, complete cds
          Length = 771

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 203 aggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaaca 262
           |||||||||||| || ||||||||||||| ||||| ||||| || ||||| ||||| || 
Sbjct: 148 aggaactttagattgttggaagagcttgaaagaggtgagaaaggtattggagatggtact 207

                                           
Query: 263 gttagctatggaatggatgacgcagatgatat 294
           |||||||||||||||||||| || ||||||||
Sbjct: 208 gttagctatggaatggatgatgctgatgatat 239



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 361 tcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtt 417
           |||| |||||||||||||||  ||||| || || || || ||||||||||| |||||
Sbjct: 306 tcagctgaagcttttctgtggtaaggagtaccctgaaagtccaccgactgtgaggtt 362
to top
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 203   aggaactttagactgctggaagagcttgagagaggagagaagggcattggggatggaaca 262
             |||||||||||| || ||||||||||||| ||||| ||||| || ||||| ||||| || 
Sbjct: 34675 aggaactttagattgttggaagagcttgaaagaggtgagaaaggtattggagatggtact 34616

                                             
Query: 263   gttagctatggaatggatgacgcagatgatat 294
             |||||||||||||||||||| || ||||||||
Sbjct: 34615 gttagctatggaatggatgatgctgatgatat 34584



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 361   tcagttgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtt 417
             |||| |||||||||||||||  ||||| || || || || ||||||||||| |||||
Sbjct: 34128 tcagctgaagcttttctgtggtaaggagtaccctgaaagtccaccgactgtgaggtt 34072
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                           
Query: 216     tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
               |||| |||||||||||  | || || ||||||||||| |||||||| || ||||||||||
Sbjct: 7152189 tgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaa 7152130

                                                                      
Query: 276     tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtcc 330
               ||||||| |||||||| ||||||||||| || ||||| || || || ||||||||
Sbjct: 7152129 tggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 7152075



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                           
Query: 366     tgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtttcactcaa 425
               ||||||| ||||||||||||||||| ||||| | ||||||  ||||  ||||||| ||||
Sbjct: 7151629 tgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaa 7151570

                     
Query: 426     gaatca 431
               ||||||
Sbjct: 7151569 gaatca 7151564
to top
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1381_H04
          Length = 130961

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                        
Query: 216  tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
            |||| |||||||||||  | || || ||||||||||| |||||||| || ||||||||||
Sbjct: 4294 tgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaa 4235

                                                                   
Query: 276  tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtcc 330
            ||||||| |||||||| ||||||||||| || ||||| || || || ||||||||
Sbjct: 4234 tggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 4180



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 366  tgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtttcactcaa 425
            ||||||| ||||||||||||||||| ||||| | ||||||  ||||  ||||||| ||||
Sbjct: 3734 tgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaa 3675

                  
Query: 426  gaatca 431
            ||||||
Sbjct: 3674 gaatca 3669
to top
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                          
Query: 216    tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
              |||| |||||||||||  | || || ||||||||||| |||||||| || ||||||||||
Sbjct: 104268 tgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaa 104209

                                                                     
Query: 276    tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtcc 330
              ||||||| |||||||| ||||||||||| || ||||| || || || ||||||||
Sbjct: 104208 tggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 104154



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                          
Query: 366    tgaagcttttctgtgacaaggactatccagacaggccaccgactgttaggtttcactcaa 425
              ||||||| ||||||||||||||||| ||||| | ||||||  ||||  ||||||| ||||
Sbjct: 103708 tgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaa 103649

                    
Query: 426    gaatca 431
              ||||||
Sbjct: 103648 gaatca 103643
to top
>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.1 mRNA, complete cds
          Length = 864

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 202 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 261

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || || ||||| ||||||||||| || || ||  | || 
Sbjct: 262 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 321

                                     
Query: 359 tatcagttgaagcttttctgtgacaa 384
           |||||||||||||| || ||||||||
Sbjct: 322 tatcagttgaagctcttttgtgacaa 347
to top
>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 587

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 76  gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 135

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || || ||||| ||||||||||| || || ||  | || 
Sbjct: 136 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 195

                                     
Query: 359 tatcagttgaagcttttctgtgacaa 384
           |||||||||||||| || ||||||||
Sbjct: 196 tatcagttgaagctcttttgtgacaa 221
to top
>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 810

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 151 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 210

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || || ||||| ||||||||||| || || ||  | || 
Sbjct: 211 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 270

                                     
Query: 359 tatcagttgaagcttttctgtgacaa 384
           |||||||||||||| || ||||||||
Sbjct: 271 tatcagttgaagctcttttgtgacaa 296
to top
>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 838

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 177 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 236

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || || ||||| ||||||||||| || || ||  | || 
Sbjct: 237 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 296

                                     
Query: 359 tatcagttgaagcttttctgtgacaa 384
           |||||||||||||| || ||||||||
Sbjct: 297 tatcagttgaagctcttttgtgacaa 322
to top
>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence
          Length = 832

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 203 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 262

                                                                       
Query: 299 atgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggccggatt 358
           ||||| || ||||| || || || || ||||| ||||||||||| || || ||  | || 
Sbjct: 263 atgcgttcttggactggcactatcatcggtcctcacaacactgttcatgaaggtagaatc 322

                                     
Query: 359 tatcagttgaagcttttctgtgacaa 384
           |||||||||||||| || ||||||||
Sbjct: 323 tatcagttgaagctcttttgtgacaa 348
to top
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                         
Query: 216   tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
             ||||||| ||||||||  | |||||||| || ||||| |||||||| || ||||||||||
Sbjct: 13429 tgctggaggagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaa 13488

                                                                         
Query: 276   tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
             ||||||| | |||||| || || |||||||| ||||| || || || || ||||| ||||
Sbjct: 13489 tggatgatggagatgacatttatatgcgctcttggactggcactatcatcggtcctcaca 13548

               
Query: 336   ac 337
             ||
Sbjct: 13549 ac 13550



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 338   actgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
             ||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 13677 actgtacatgagggtcggatttatcagttgaagctcttctgtgacaa 13723
to top
>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence
          Length = 843

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                       
Query: 219 tggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaatgg 278
           |||| |||||||| |||||||| || || || ||||||||||| || |||||||| ||||
Sbjct: 191 tggaggagcttgaaagaggagaaaaaggaataggggatggaactgtcagctatgggatgg 250

                                                            
Query: 279 atgacgcagatgatatctacatgcgctcctggacaggaacaataattgg 327
           |||| ||||||||  | |||||||  || ||||||||||| || |||||
Sbjct: 251 atgatgcagatgacgtgtacatgcagtcatggacaggaactatcattgg 299
to top
>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds
          Length = 475

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 136/169 (80%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgctggaagagcttgagagaggagagaagggcattggggatggaacagttagctatggaa 275
           ||||||| ||||||||| | ||||| ||||| || || ||||| || || ||||||||||
Sbjct: 31  tgctggaggagcttgagcgtggagaaaagggtatcggagatggcactgtgagctatggaa 90

                                                                       
Query: 276 tggatgacgcagatgatatctacatgcgctcctggacaggaacaataattggtccccaca 335
           ||||||| |  ||||||||||| ||||| || |||||||| || || || || || ||||
Sbjct: 91  tggatgatggtgatgatatctatatgcgatcatggacaggcaccatcatcggccctcaca 150

                                                            
Query: 336 acactgtccacgagggccggatttatcagttgaagcttttctgtgacaa 384
           |  |||| || ||||| || || || || |||||||| || ||||||||
Sbjct: 151 attctgtgcatgagggtcgcatctaccaattgaagctattttgtgacaa 199
to top
>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.2 mRNA, complete cds
          Length = 864

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
           ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 202 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 261

                                                  
Query: 299 atgcgctcctggacaggaacaataattggtccccacaac 337
           ||||| || ||||| || || || || ||||| ||||||
Sbjct: 262 atgcgttcttggactggcaccatcatcggtcctcacaac 300
to top
>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds
          Length = 203

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 116/143 (81%)
 Strand = Plus / Plus

                                                                       
Query: 254 gatggaacagttagctatggaatggatgacgcagatgatatctacatgcgctcctggaca 313
           ||||| ||||| || |||||||||||||| |  || || || |||||||| || ||||| 
Sbjct: 26  gatggcacagtgagttatggaatggatgatggcgacgacatttacatgcgttcatggact 85

                                                                       
Query: 314 ggaacaataattggtccccacaacactgtccacgagggccggatttatcagttgaagctt 373
           || || || |||||||| |||||| |||| ||||| || || ||||||||  ||||||| 
Sbjct: 86  ggcaccatcattggtcctcacaactctgtacacgaaggtcgcatttatcaactgaagctg 145

                                  
Query: 374 ttctgtgacaaggactatccaga 396
           || |||||||| || ||||||||
Sbjct: 146 ttttgtgacaaagattatccaga 168
to top
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                         
Query: 239   gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
             ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 15847 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 15788

                                                    
Query: 299   atgcgctcctggacaggaacaataattggtccccacaac 337
             ||||| || ||||| || || || || ||||| ||||||
Sbjct: 15787 atgcgttcttggactggcaccatcatcggtcctcacaac 15749
to top
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                         
Query: 239   gagaagggcattggggatggaacagttagctatggaatggatgacgcagatgatatctac 298
             ||||| || |||||||||||||| || ||||||||||||||||| | |||||| ||||| 
Sbjct: 77564 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 77505

                                                    
Query: 299   atgcgctcctggacaggaacaataattggtccccacaac 337
             ||||| || ||||| || || || || ||||| ||||||
Sbjct: 77504 atgcgttcttggactggcaccatcatcggtcctcacaac 77466
to top
>ref|XM_474414.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 447

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 293 atctacatgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggc 352
           |||| ||||||||||||||| || ||||| ||||| || | |||| |||| |||||||| 
Sbjct: 136 atcttcatgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgagggg 195

                                                 
Query: 353 cggatttatcagttgaagcttttctgtgacaaggacta 390
           || || || ||| ||||||| ||||| |||||||||||
Sbjct: 196 cgcatctaccagctgaagctcttctgcgacaaggacta 233
to top
>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full
           insert sequence
          Length = 813

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 293 atctacatgcgctcctggacaggaacaataattggtccccacaacactgtccacgagggc 352
           |||| ||||||||||||||| || ||||| ||||| || | |||| |||| |||||||| 
Sbjct: 149 atcttcatgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgagggg 208

                                                 
Query: 353 cggatttatcagttgaagcttttctgtgacaaggacta 390
           || || || ||| ||||||| ||||| |||||||||||
Sbjct: 209 cgcatctaccagctgaagctcttctgcgacaaggacta 246
to top
>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G70660 mRNA, complete cds
          Length = 838

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           ||||||||| |  |||||||||| || ||||| ||||| || ||||| ||||| ||||| 
Sbjct: 197 aactttagattattggaagagctagaaagaggtgagaaaggaattggagatgggacagtg 256

                                        
Query: 266 agctatggaatggatgacgcagatgatat 294
           || |||||||||||||| || ||||||||
Sbjct: 257 agttatggaatggatgatgctgatgatat 285
to top
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 206   aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
             ||||||||| |  |||||||||| || ||||| ||||| || ||||| ||||| ||||| 
Sbjct: 63622 aactttagattattggaagagctagaaagaggtgagaaaggaattggagatgggacagtg 63563

                                          
Query: 266   agctatggaatggatgacgcagatgatat 294
             || |||||||||||||| || ||||||||
Sbjct: 63562 agttatggaatggatgatgctgatgatat 63534
to top
>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 511

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           ||||||||| |  |||||||||| || ||||| ||||| || ||||| ||||| ||||| 
Sbjct: 37  aactttagattattggaagagctagaaagaggtgagaaaggaattggagatgggacagtg 96

                                        
Query: 266 agctatggaatggatgacgcagatgatat 294
           || |||||||||||||| || ||||||||
Sbjct: 97  agttatggaatggatgatgctgatgatat 125
to top
>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 827

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           ||||||||| |  |||||||||| || ||||| ||||| || ||||| ||||| ||||| 
Sbjct: 182 aactttagattattggaagagctagaaagaggtgagaaaggaattggagatgggacagtg 241

                                        
Query: 266 agctatggaatggatgacgcagatgatat 294
           || |||||||||||||| || ||||||||
Sbjct: 242 agttatggaatggatgatgctgatgatat 270
to top
>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence
          Length = 815

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 206 aactttagactgctggaagagcttgagagaggagagaagggcattggggatggaacagtt 265
           ||||||||| |  |||||||||| || ||||| ||||| || ||||| ||||| ||||| 
Sbjct: 174 aactttagattattggaagagctagaaagaggtgagaaaggaattggagatgggacagtg 233

                                        
Query: 266 agctatggaatggatgacgcagatgatat 294
           || |||||||||||||| || ||||||||
Sbjct: 234 agttatggaatggatgatgctgatgatat 262
to top
>gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conjugating enzyme
           variant MMS2-like mRNA, partial sequence
          Length = 229

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Minus

                                                                       
Query: 191 gttgtcgtgccaaggaactttagactgctggaagagcttgagagaggagagaagggcatt 250
           ||||| || ||||| |||||| |  |||||| |||||| || ||||||||||| ||  ||
Sbjct: 104 gttgttgttccaagaaactttcgtttgctgggagagctagaaagaggagagaaaggattt 45

                                                   
Query: 251 ggggatggaacagttagctatggaatggatgacgcagatg 290
           || ||||| || || |||||||||||||| |||| |||||
Sbjct: 44  ggtgatgggactgtcagctatggaatggaagacggagatg 5
to top
>gb|AY191225.1| Aplysia californica nervous system adducin (ADD) mRNA, complete cds
          Length = 4000

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 229  tgagagaggagagaagggcattgggga 255
            |||||||||||||||||||| ||||||
Sbjct: 2337 tgagagaggagagaagggcagtgggga 2311
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 85      cggagcacgcgcgccgccccgaattcgcct 114
               ||||||| ||||||||| ||||||||||||
Sbjct: 2276707 cggagcatgcgcgccgcgccgaattcgcct 2276736
to top
>gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, complete sequence
          Length = 178352

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    gacaggaacaataattggtcc 330
              |||||||||||||||||||||
Sbjct: 113257 gacaggaacaataattggtcc 113237
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 121     tccgccggacggtctcctccc 141
               |||||||||||||||||||||
Sbjct: 1014593 tccgccggacggtctcctccc 1014573
to top
>gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, complete sequence
          Length = 170076

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 310    gacaggaacaataattggtcc 330
              |||||||||||||||||||||
Sbjct: 146069 gacaggaacaataattggtcc 146089
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     gagcgccgccgagcacgcgcgcacg 73
              |||||| ||||||||||||||||||
Sbjct: 852129 gagcgcggccgagcacgcgcgcacg 852153
to top
>emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chromosome 6 Contains 3'
             end of C6orf12 for chromosome 6 open reading frame 12,
             ETF1P1 for eukaryotic translation termination factor 1
             pseudogene 1, ZNRD1 for zinc ribbon domain containing, 1,
             PPP1R11 for protein phosphatase 1, regulatory (inhibitor)
             subunit 11, RNF39 for ring finger protein 39 and 3 CpG
             islands, complete sequence
          Length = 74764

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   agagaggagagaagggcattg 251
             |||||||||||||||||||||
Sbjct: 63889 agagaggagagaagggcattg 63909



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   agagaggagagaagggcatt 250
             ||||||||||||||||||||
Sbjct: 65574 agagaggagagaagggcatt 65555
to top
>emb|AL137144.14| Human DNA sequence from clone RP11-210E23 on chromosome 13q31.1-32.3
             Contains the 3' end of the GPC6 gene for glypican 6,
             complete sequence
          Length = 100072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 231   agagaggagagaagggcattgggga 255
             |||||||| ||||||||||||||||
Sbjct: 70463 agagaggaaagaagggcattgggga 70487
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      cgccgagcacgcgcgcacgcc 75
               |||||||||||||||||||||
Sbjct: 3061024 cgccgagcacgcgcgcacgcc 3061004
to top
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 231     agagaggagagaagggcattg 251
               |||||||||||||||||||||
Sbjct: 1395227 agagaggagagaagggcattg 1395207



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     agagaggagagaagggcatt 250
               ||||||||||||||||||||
Sbjct: 1393552 agagaggagagaagggcatt 1393571
to top
>gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, complete sequence
          Length = 138057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ctggaagagcttgagagagg 237
             ||||||||||||||||||||
Sbjct: 98387 ctggaagagcttgagagagg 98368
to top
>ref|NM_001030610.1| Gallus gallus similar to KIAA1191 protein (LOC416230), mRNA
          Length = 2676

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 366  tgaagcttttctgtgacaaggact 389
            |||||||||||||| |||||||||
Sbjct: 2327 tgaagcttttctgttacaaggact 2350
to top
>emb|AJ851782.1| Gallus gallus mRNA for hypothetical protein, clone 31b20
          Length = 2676

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 366  tgaagcttttctgtgacaaggact 389
            |||||||||||||| |||||||||
Sbjct: 2327 tgaagcttttctgttacaaggact 2350
to top
>emb|CR407336.1| Gallus gallus finished cDNA, clone ChEST108o11
          Length = 1354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 366  tgaagcttttctgtgacaaggact 389
            |||||||||||||| |||||||||
Sbjct: 1013 tgaagcttttctgttacaaggact 1036
to top
>gb|AC148667.1| Macaca mulatta Major Histocompatibility Complex BAC MMU025A04, complete
              sequence
          Length = 218267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    agagaggagagaagggcatt 250
              ||||||||||||||||||||
Sbjct: 109544 agagaggagagaagggcatt 109563
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 339      ctgtccacgagggccggatttatcagttgaagcttttctgtgacaaggacta 390
                |||| |||||||| || || || ||| ||||||| ||||| |||||||||||
Sbjct: 35011317 ctgtgcacgaggggcgcatctaccagctgaagctcttctgcgacaaggacta 35011368
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      actcaagaatcacatgacct 439
                ||||||||||||||||||||
Sbjct: 31338508 actcaagaatcacatgacct 31338527
to top
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     agagaggagagaagggcatt 250
               ||||||||||||||||||||
Sbjct: 2324486 agagaggagagaagggcatt 2324467
to top
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0024K03
          Length = 119796

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   actcaagaatcacatgacct 439
             ||||||||||||||||||||
Sbjct: 21082 actcaagaatcacatgacct 21101
to top
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1118_G04
          Length = 134464

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    actcaagaatcacatgacct 439
              ||||||||||||||||||||
Sbjct: 108376 actcaagaatcacatgacct 108395
to top
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 339   ctgtccacgagggccggatttatcagttgaagcttttctgtgacaaggacta 390
             |||| |||||||| || || || ||| ||||||| ||||| |||||||||||
Sbjct: 43065 ctgtgcacgaggggcgcatctaccagctgaagctcttctgcgacaaggacta 43116
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     gctggaagagcttgagagag 236
               ||||||||||||||||||||
Sbjct: 1402100 gctggaagagcttgagagag 1402119
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     ttgtcgtgccaaggaacttt 211
               ||||||||||||||||||||
Sbjct: 1620910 ttgtcgtgccaaggaacttt 1620929
to top
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 339   ctgtccacgagggccggatttatcagttgaagcttttctgtgacaaggacta 390
             |||| |||||||| || || || ||| ||||||| ||||| |||||||||||
Sbjct: 70367 ctgtgcacgaggggcgcatctaccagctgaagctcttctgcgacaaggacta 70418
to top
>emb|AL591864.14| Mouse DNA sequence from clone RP23-21H3 on chromosome 15, complete
             sequence
          Length = 143342

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 218   ctggaagagcttgagagaggagagaagg 245
             ||||| |||||||| |||||||||||||
Sbjct: 94893 ctggaggagcttgaaagaggagagaagg 94920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,140,964
Number of Sequences: 3902068
Number of extensions: 3140964
Number of successful extensions: 68435
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67757
Number of HSP's gapped (non-prelim): 668
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top