>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 32/81 (39%), Positives = 44/81 (54%)
 Frame = +1

Query: 118 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 297
           VVLPV+ D +TG +    ++RTP + V  ++DL G  LWV+C+  Y S +Y    C S  
Sbjct: 34  VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93

Query: 298 CRLAKSVACATSCVGKPSPGC 360
           C  A +  C  SC     PGC
Sbjct: 94  CSRANTHQC-LSCPAASRPGC 113

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +1

Query: 118 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 297
           +VLPV+ D++TG +    ++RTP + V  ++DL G  LWV+C+  Y S +Y    C S  
Sbjct: 41  LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQ 100

Query: 298 CRLAKSVACATSCVGKPSPGC 360
           C  A +  C  SC     PGC
Sbjct: 101 CSRANTHQC-LSCPAASRPGC 120

>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
 Frame = +1

Query: 103 NNPSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA----------- 249
           N PS V   V   +  G+YL      TP  P +A++D G   +W  C             
Sbjct: 79  NGPSGVETSVY--AGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPI 136

Query: 250 --GYVSSSYAGVPCASKLCRLAKSVACATS 333
                SSS++ +PC+S+LC+   S  C+ +
Sbjct: 137 FNPQGSSSFSTLPCSSQLCQALSSPTCSNN 166

>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)|
           (Nepenthesin-II)
          Length = 438

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 13/71 (18%)
 Frame = +1

Query: 151 GQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA-------------GYVSSSYAGVPCAS 291
           G+YL      TP    +A++D G   +W  C+                 SSS++ +PC S
Sbjct: 94  GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCES 153

Query: 292 KLCRLAKSVAC 324
           + C+   S  C
Sbjct: 154 QYCQDLPSETC 164

>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
          Length = 2158

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -2

Query: 312 LREAAQLXXXXXXXXXXXXVPGVAVHPE---RGASKVEHGRHRDLGRSLPEARQVLP 151
           LREA +L             PG   HPE   RGAS      +RDL   + ++ + LP
Sbjct: 698 LREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEKLYRDLHNQMIKSIKGLP 754

>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor|
            (Protein starry night) (Protein flamingo)
          Length = 3574

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +1

Query: 238  DCDAGYVSSSYAGV----PCASKLCRLAKSVACATSC 336
            +CD+GYV +  A +    PCAS +CR   S+     C
Sbjct: 1989 ECDSGYVGTDCAPICTVRPCASGVCRANTSLPRGYDC 2025

>YAG1_SCHPO (Q09866) Hypothetical WD-repeat protein C12G12.01c in chromosome I|
          Length = 905

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 231 ERGASKVEHGRHRDLGRSLPEARQVLPRCAV 139
           +RG SK    +H  LG+S P   Q LP+C+V
Sbjct: 802 QRGVSKAGPAKH--LGKSCPHCGQPLPKCSV 830

>CARPV_CANAL (P10977) Vacuolar aspartic protease precursor (EC 3.4.23.-)|
           (Aspartate protease) (ACP)
          Length = 419

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +1

Query: 154 QYLTGFRQRTPQVPVTAVLDLGGASLWV---DC 243
           QY T  +  TP  P   +LD G ++LWV   DC
Sbjct: 103 QYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDC 135

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 108  PERRGAAGEEGQRNGAVPDGLPAANAPGPGD 200
            P ++G  GE+G +    P GLP    P PGD
Sbjct: 1243 PGKKGPPGEDGAKGSVGPTGLPGDLGP-PGD 1272

>CI010_HUMAN (Q9NZB2) Protein C9orf10|
          Length = 1069

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 109 PSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLD 213
           PSAVV    +  A G  + G RQR PQ P+  ++D
Sbjct: 15  PSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVD 49

>MATN3_HUMAN (O15232) Matrilin-3 precursor|
          Length = 486

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 111 ERRGAAGEEGQR-NGAVPDGLPAANAPGPG 197
           E RG  G  G+R + A PDG PA+    PG
Sbjct: 40  ETRGPGGSPGRRPSPAAPDGAPASGTSEPG 69

>NAPSA_MOUSE (O09043) Napsin-A precursor (EC 3.4.23.-) (Kidney-derived aspartic|
           protease-like protein) (KDAP-1) (KAP)
          Length = 419

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 100 GNNPSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWV 237
           G NPS V  P+ K   T QY       TP    T V D G ++LWV
Sbjct: 57  GGNPSFV--PLSKFMNT-QYFGTIGLGTPPQNFTVVFDTGSSNLWV 99

>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 120 GAAGEEGQRNGAVPDGLPAANAPGP 194
           GA       N A P G P AN+PGP
Sbjct: 275 GAPASPAGSNPARPGGFPGANSPGP 299

>IL3RA_MOUSE (P26952) Interleukin-3 receptor class 2 alpha chain precursor|
           (Interleukin-3 receptor class II alpha chain) (CD123
           antigen)
          Length = 396

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 236 TQSEAPPRSSTAVTGTWGVRCRKPVRYCPVALSFLTGSTTALG 108
           ++SE  PR  ++ +  WG+ C  P    PV  + +T   T LG
Sbjct: 303 SRSEVYPRKLSSWSEAWGLVC--PPEVMPVKTALVTSVATVLG 343

>TRPB_HALSA (Q9HSC0) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 430

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 166 GFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSS 267
           G  +  P V + AV + GG+ L VD DAGY  +S
Sbjct: 264 GTHEPAPDVDLLAV-EAGGSRLGVDDDAGYAPNS 296

>RHBD1_MOUSE (Q8VC82) Rhomboid-related protein 1 (EC 3.4.21.105) (RRP)|
           (Rhomboid-like protein 1)
          Length = 373

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +1

Query: 157 YLTGFRQRTPQVPVT---AVLDLGGASLWVDCDA--GYVSSSYAGVPCASKLCRLAKSVA 321
           YL G    +  V +T   A +  G   ++  C A    V  ++AG+ C  KL R+  ++ 
Sbjct: 223 YLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALV 282

Query: 322 CATSCVGK 345
           C +S VG+
Sbjct: 283 CMSSEVGR 290

>RHBD1_HUMAN (O75783) Rhomboid-related protein 1 (EC 3.4.21.105) (RRP)|
           (Rhomboid-like protein 1)
          Length = 438

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +1

Query: 157 YLTGFRQRTPQVPVT---AVLDLGGASLWVDCDA--GYVSSSYAGVPCASKLCRLAKSVA 321
           YL G    +  V +T   A +  G   ++  C A    V  ++AG+ C  KL R+  ++ 
Sbjct: 288 YLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALV 347

Query: 322 CATSCVGK 345
           C +S VG+
Sbjct: 348 CMSSEVGR 355

>GDA1_ASPFU (Q8TGG8) Probable guanosine-diphosphatase (EC 3.6.1.42) (GDPase)|
          Length = 503

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +1

Query: 148 TGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVP 282
           T  YL G      + P  AV DLGG S  +     +  S   G+P
Sbjct: 201 TTNYLLGKIGGPDETPTAAVFDLGGGSTQIVFQPTFPKSKSGGMP 245

>SGG_DROME (P18431) Protein kinase shaggy (EC 2.7.11.1) (Protein zeste-white 3)|
          Length = 1067

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 105  QPERRGAAGEEGQRNGAVPDGLPAANAPGPG 197
            QP+ +G A   G  +G    G   A+A GPG
Sbjct: 975  QPQSQGTAAAAGSGSGGATAGTGGASAGGPG 1005

>GCP3_HUMAN (Q96CW5) Gamma-tubulin complex component 3 (GCP-3) (Spindle pole|
           body protein Spc98 homolog) (hSpc98) (hGCP3) (h104p)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 341 PTQLVAQATLFARRHSLDAHGTP--A*DEDTYPASQSTQSEAPPRSSTAVTGTWGV 180
           P+++ + ATLFA+    DAH TP       T P S   +S    +SS +V G+ G+
Sbjct: 108 PSKVSSYATLFAQALPRDAHSTPYYYARPQTLPLSYQDRSAQSAQSSGSV-GSSGI 162

>RHBD1_RAT (O88779) Rhomboid-related protein 1 (EC 3.4.21.105) (RRP)|
           (Rhomboid-like protein 1) (Fragment)
          Length = 164

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +1

Query: 157 YLTGFRQRTPQVPVT---AVLDLGGASLWVDCDA--GYVSSSYAGVPCASKLCRLAKSVA 321
           YL G    +  V +T   A +  G   ++  C A    V  ++AG+ C  KL R+  ++ 
Sbjct: 36  YLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALV 95

Query: 322 CATSCVGK 345
           C +S VG+
Sbjct: 96  CMSSEVGR 103

>NEP1_NEPDI (P69476) Aspartic proteinase nepenthesin-1 (EC 3.4.23.-)|
           (Nepenthesin-I) (Fragments)
          Length = 164

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
 Frame = +1

Query: 151 GQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAG---------YVSSSYAGVPC 285
           G+YL      TP  P +A++D G   +W                 SSS++ +PC
Sbjct: 15  GEYLMXLSIGTPAQPFSAIMDTGSDLIWTQXQPXTQXFXQSDPQGSSSFSTLPC 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,205,193
Number of Sequences: 219361
Number of extensions: 594291
Number of successful extensions: 2624
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2621
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)