>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +2

Query: 11  PPKHRRHSPPLAHPRAASL*LPPREIXXXXXXXXARSHPSTTRSQPA 151
           PPK R  SPP    R AS   PP+           RS P T R  P+
Sbjct: 623 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPS 669

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +2

Query: 11  PPKHRRHSPPLAHPRAASL*LPPREIXXXXXXXXARSHPSTTRSQPA 151
           PPK R  SPP    R AS   PP+           RS P T R  P+
Sbjct: 609 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPS 655

>BUD8_YEAST (P41698) Bud site selection protein BUD8|
          Length = 603

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 18  SIAATLRLSLIRVQHLSSSPLERSHSRVSSS 110
           S A T+  S++  + +  SP+E+ HSRV SS
Sbjct: 154 SCALTISTSVLMGEDVEGSPIEQEHSRVVSS 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,900,386
Number of Sequences: 219361
Number of extensions: 293950
Number of successful extensions: 1075
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)