ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52f05 |
|---|---|
| Clone Library Name | barley_pub |
>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 112 bits (281), Expect = 3e-25 Identities = 57/62 (91%), Positives = 58/62 (93%) Frame = +1 Query: 271 VQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSRV 450 VQRL + ASLETDSRLRVRITDADHPRWEVPQDIIPRPAP DVLHDAPPASSAPLQG RV Sbjct: 60 VQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPGDVLHDAPPASSAPLQG-RV 118 Query: 451 LS 456 LS Sbjct: 119 LS 120
>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 903 Score = 58.2 bits (139), Expect = 1e-08 Identities = 26/43 (60%), Positives = 33/43 (76%) Frame = +1 Query: 262 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAP 390 GP +Q L +TASLE++ RLRVRITDA H RWE+P +I+ R P Sbjct: 69 GPDIQLLSITASLESNDRLRVRITDAKHRRWEIPDNILHRHQP 111
>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 913 Score = 57.0 bits (136), Expect = 2e-08 Identities = 26/55 (47%), Positives = 34/55 (61%) Frame = +1 Query: 262 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASS 426 GP + L TAS E D LR+R TDA++ RWE+P +++PRP P PP SS Sbjct: 74 GPDIHFLSFTASFEEDDTLRIRFTDANNRRWEIPNEVLPRPPPPP---SPPPLSS 125
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 52.4 bits (124), Expect = 6e-07 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = +1 Query: 262 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADV 399 G + LRL ETDSRLRV ITDA RWEVP +++PR P V Sbjct: 62 GSDITTLRLFVKHETDSRLRVHITDAKQQRWEVPYNLLPREQPPQV 107
>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1840 Score = 36.6 bits (83), Expect = 0.031 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +1 Query: 244 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPA---PADVLHD 408 P+ G ++ + LT +T +R R +ITD ++ R+EVP + AD L+D Sbjct: 143 PSPTLFGEDIKSVILTTQTQTGNRFRFKITDPNNKRYEVPHQFVKEETGIPAADTLYD 200
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 35.8 bits (81), Expect = 0.054 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +1 Query: 262 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHD 408 G + + LT +T +RLR ++TD ++ R+EVP + PA + L+D Sbjct: 139 GNDINNVLLTTESQTANRLRFKLTDPNNKRYEVPHQFVTEFAGPAATETLYD 190
>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 35.4 bits (80), Expect = 0.070 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +1 Query: 244 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHDAP 414 P+ G + + T +T +R R +ITD ++ R+EVP + P +D L+D Sbjct: 133 PSPTLFGNDINSVLFTTQNQTPNRFRFKITDPNNRRYEVPHQYVKEFTGPTVSDTLYDVK 192 Query: 415 PASS 426 A + Sbjct: 193 VAQN 196
>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1812 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 262 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASS 426 G + L LT +T +R R +ITD ++ R+EVP + + PPAS+ Sbjct: 124 GDNITNLLLTTQSQTANRFRFKITDPNNQRYEVPHQFVNKD------FSGPPASN 172
>MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: Maltase (EC| 3.2.1.20) (Alpha-glucosidase); Glucoamylase (EC 3.2.1.3) (Glucan 1,4-alpha-glucosidase)] Length = 1856 Score = 33.5 bits (75), Expect = 0.27 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 244 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 369 P+ G V + LTA +T +R ++TD + R+EVP + Sbjct: 158 PSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHE 199
>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) Length = 953 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = +1 Query: 271 VQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAP 414 V L+L +ETDSRL +I D R+EVP + PR VL AP Sbjct: 164 VLTLQLEVLMETDSRLHFKIKDPASKRYEVPLE-TPR-----VLSQAP 205
>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)| (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen 240 kDa protein) (Mi2-alpha) (Zinc-finger helicase) (hZFH) Length = 2000 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 316 LRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQG 441 L+ R+ H RW P +P P AD D PP PLQG Sbjct: 505 LKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPP--PRPLQG 544
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +1 Query: 289 TASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPP 417 T ++ET + RV + D PR E P+ P PAPA +A P Sbjct: 79 TVTVETRKK-RVVVRPDDAPRAEAPKPAEPAPAPAAAPAEAKP 120
>RS4_METBF (Q46GC8) 30S ribosomal protein S4P| Length = 216 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 354 PSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKR 226 P R V V A L A +EA+ +P R GR+ G+R Sbjct: 174 PERPVQVASVLADSTTTLRAVAEAKQAKEKPPERGGRKRRGRR 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,614,117 Number of Sequences: 219361 Number of extensions: 570597 Number of successful extensions: 3229 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2750 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3165 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
