ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYSKP_CAPAN (P31300) Cysteine synthase, chloroplast precursor (E... 30 1.0
2ILVB_ECOLI (P08142) Acetolactate synthase isozyme I large subuni... 28 6.8

>CYSKP_CAPAN (P31300) Cysteine synthase, chloroplast precursor (EC 2.5.1.47)|
           (O-acetylserine sulfhydrylase) (O-acetylserine
           (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B)
          Length = 374

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 10  NPTQPNHLAPFRSMASLLLKGVHKRLGLPSI---SISCSSADATNI 138
           N  +PN +   RS  SL+   V++++G PS+   ++S  +   T I
Sbjct: 17  NKCEPNRICSLRSQQSLVFDNVNRKVGFPSVVCKAVSVQTKSPTEI 62



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>ILVB_ECOLI (P08142) Acetolactate synthase isozyme I large subunit (EC 2.2.1.6)|
           (AHAS-I) (Acetohydroxy-acid synthase I large subunit)
           (ALS-I)
          Length = 562

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 16  TQPNH-LAPFRSMASLLLKGVHKRLGLPSISISCSSADATNII 141
           TQ  H LA     A  + +G+ +  G P++ ++CS   ATN++
Sbjct: 50  TQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLV 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.128    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,496,247
Number of Sequences: 219361
Number of extensions: 384860
Number of successful extensions: 1355
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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