ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52e11 |
|---|---|
| Clone Library Name | barley_pub |
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +1 Query: 130 CLPLRHGC----RSPPQAPAAMCLRTWAGGATASPPQAEPP 240 CLP++ G SP P A+ R +G A SPP PP Sbjct: 1018 CLPVKRGSPASPTSPSDCPPALAPRPLSGQAPGSPPSTRPP 1058
>CLPP2_COREF (Q8FN36) ATP-dependent Clp protease proteolytic subunit 2 (EC| 3.4.21.92) (Endopeptidase Clp 2) Length = 199 Score = 32.3 bits (72), Expect = 0.28 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%) Frame = +2 Query: 314 VELDAPGGVA--SGDVMGLLLRERIIFLGNEI 403 + + APG SGD+ LLRERIIFLG+++ Sbjct: 5 LNMTAPGAGTGYSGDIFDRLLRERIIFLGSQV 36
>GATA5_HUMAN (Q9BWX5) Transcription factor GATA-5 (GATA-binding factor 5)| Length = 397 Score = 32.0 bits (71), Expect = 0.36 Identities = 37/138 (26%), Positives = 44/138 (31%), Gaps = 10/138 (7%) Frame = +1 Query: 16 SLTLREGGEKGAXXXXXXXXHNPRS*ADRHGGYQRECRCLPLRHGCRSPPQAPAAMCLRT 195 SL L + A H P + + R L GC PQ P Sbjct: 4 SLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLSGCEPSPQPPELAARPG 63 Query: 196 WAGGATAS----------PPQAEPPQLRGFGIXXXXXXXXXXXXXXXHPSGVGCAGRSGQ 345 WA ATA PP A PP F PSG G G +G Sbjct: 64 WAQTATADSSAFGPGSPHPPAAHPPGATAFPFAHS-------------PSGPGSGGSAGG 110 Query: 346 R*RHGPSSPGAHHLPRQR 399 R G + GA LPR++ Sbjct: 111 --RDGSAYQGA-LLPREQ 125
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 30.8 bits (68), Expect = 0.80 Identities = 15/25 (60%), Positives = 16/25 (64%) Frame = -3 Query: 166 EAVSGSRDGEGGSGTRAGSRHAYLP 92 + VS R GEGGSGT GS A LP Sbjct: 141 DLVSEGRSGEGGSGTTGGSCSASLP 165
>CLPP4_STRCO (Q9X7S0) Putative ATP-dependent Clp protease proteolytic| subunit-like (Endopeptidase Clp-like) Length = 200 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/25 (64%), Positives = 16/25 (64%) Frame = +2 Query: 329 PGGVASGDVMGLLLRERIIFLGNEI 403 P G S DV LL ERIIFLG EI Sbjct: 14 PQGERSYDVFSRLLSERIIFLGTEI 38
>CLPP2_STRAW (Q82NZ3) ATP-dependent Clp protease proteolytic subunit 2 (EC| 3.4.21.92) (Endopeptidase Clp 2) Length = 200 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/25 (64%), Positives = 16/25 (64%) Frame = +2 Query: 329 PGGVASGDVMGLLLRERIIFLGNEI 403 P G S DV LL ERIIFLG EI Sbjct: 14 PQGERSYDVFSRLLSERIIFLGTEI 38
>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)| (EBNA-4) (EBNA-3B) Length = 938 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 163 PQAPAAMCLRTWAGGATASPPQAEPP 240 P PA M LR WA +PP+A P Sbjct: 678 PTGPATMLLRQWAPATMQTPPRAPTP 703
>CLPP_DEHSC (Q3ZX82) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 200 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G + D+ LLL+ERIIFLG++I Sbjct: 18 GERAFDIYSLLLKERIIFLGSQI 40
>CLPP_DEHE1 (Q3Z8J8) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 200 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G + D+ LLL+ERIIFLG++I Sbjct: 18 GERAFDIYSLLLKERIIFLGSQI 40
>CLPP2_CORGL (Q8NN01) ATP-dependent Clp protease proteolytic subunit 2 (EC| 3.4.21.92) (Endopeptidase Clp 2) Length = 201 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +2 Query: 314 VELDAPGGVASG-DVMGLLLRERIIFLGNEI 403 + + A GG G DV LL ERIIFLG+++ Sbjct: 8 IRMAAQGGPGFGNDVFDRLLSERIIFLGSQV 38
>RGL2_CANFA (Q5TJE5) Ral guanine nucleotide dissociation stimulator-like 2| (RAS-associated protein RAB2L) Length = 780 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -3 Query: 217 MRSRRRPTCAST*LPVPEAVSGSRDGEGGSGT 122 +R RRRP+ A+ L + SG+ EGG G+ Sbjct: 733 LRQRRRPSTATLGLTSSPSASGTPPSEGGGGS 764
>CLPP_PASMU (Q9CJM2) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 193 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LL+ER+IFLG E+ Sbjct: 14 GERSYDIYSRLLKERVIFLGGEV 36
>CLPP_DESPS (Q6AK59) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 203 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 329 PGGVASGDVMGLLLRERIIFLGNEI 403 P G S D+ LL+ERIIFLG+ + Sbjct: 12 PRGERSYDIYSRLLKERIIFLGSGV 36
>YKQ9_CAEEL (P34304) Hypothetical protein C06E1.9| Length = 643 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -3 Query: 232 QLEEGMRSRRRPTCAST*LPVPEAVSGSRDGEGGSGTRAGSR 107 +LE + A L P GSR G GG G R G+R Sbjct: 564 ELETSSEEDEAGSSAPPGLSQPPPYQGSRGGRGGRGARGGNR 605
>CLPP_LEPIN (Q8F352) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 198 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LL++RIIFLGN I Sbjct: 14 GERSYDIFSRLLKDRIIFLGNAI 36
>CLPP1_LEPIC (Q72SG6) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 198 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LL++RIIFLGN I Sbjct: 14 GERSYDIFSRLLKDRIIFLGNAI 36
>CLPP2_PARUW (Q6MBE9) ATP-dependent Clp protease proteolytic subunit 2 (EC| 3.4.21.92) (Endopeptidase Clp 2) Length = 207 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 323 DAPGGVASGDVMGLLLRERIIFLGNEI 403 D G S D+ LL++RIIF+G EI Sbjct: 20 DTGRGERSMDIYSRLLKDRIIFIGTEI 46
>CLPP1_SYNY3 (P54416) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 198 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 Query: 350 DVMGLLLRERIIFLGNEI 403 D+ LLRERI+FLG E+ Sbjct: 17 DIYSRLLRERIVFLGQEV 34
>CLPP_CHLTE (Q8KC73) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) Length = 225 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G + D+ LLRERIIFLG+ I Sbjct: 39 GERAFDIFSRLLRERIIFLGSPI 61
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 157 SPPQAPAAMCLRTWAGGATASPPQAEPPQL 246 +PP PA + + +GGA A PP PPQ+ Sbjct: 502 APPPPPAFLTQQPQSGGAPAPPP---PPQM 528
>CLPP1_BRAJA (Q89WR7) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 200 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LLRERIIFL E+ Sbjct: 18 GERSFDIYSRLLRERIIFLNGEV 40
>CLPP1_AGRT5 (Q8UEX6) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 202 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LLRERIIFL E+ Sbjct: 18 GERSFDIYSRLLRERIIFLNGEV 40
>CECR4_HUMAN (Q9BXQ7) Cat eye syndrome critical region protein 4 (Fragment)| Length = 124 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 Query: 106 GGYQRECRCLPLRHGCRSPPQAPAAMCLRTWAGG 207 GG + CL + R PQAP + WAGG Sbjct: 42 GGVRTIALCLRIPVTLRGRPQAPPSASRTVWAGG 75
>CLPP1_BACSK (Q5WLZ7) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 193 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LL++RIIF+G+EI Sbjct: 15 GERSYDIYSRLLKDRIIFIGDEI 37
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -3 Query: 199 PTCAST*LPVPEAVSGSRDGEGGSGTRAG 113 PT +T P PE + G +GG G AG Sbjct: 455 PTAPATPAPGPEPLGGPEPADGGGGGAAG 483
>CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subunit 3 (EC| 3.4.21.92) (Endopeptidase Clp 3) Length = 216 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G + D+ LLRERIIFLG ++ Sbjct: 36 GERAFDIYSRLLRERIIFLGTDV 58
>CLPP1_RHIME (P58277) ATP-dependent Clp protease proteolytic subunit 1 (EC| 3.4.21.92) (Endopeptidase Clp 1) Length = 205 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 335 GVASGDVMGLLLRERIIFLGNEI 403 G S D+ LLRERIIFL E+ Sbjct: 18 GERSFDIYSRLLRERIIFLNGEV 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,849,999 Number of Sequences: 219361 Number of extensions: 706118 Number of successful extensions: 2565 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2564 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
