ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52e02 |
|---|---|
| Clone Library Name | barley_pub |
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 66.6 bits (161), Expect = 2e-11 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 13/142 (9%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEF 178 +L+ D L+++ F+G +SD I + I + +V + AG+DM M Y+++ Sbjct: 268 WLLKDVLRDEWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKAGVDMSMADEYYSKY 327 Query: 179 IDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQE-------- 334 + L +K+ + M+ ++DA +L VK+ MGLF PY+ LG +E Sbjct: 328 LPGL---IKSGKVTMAELDDATRHVLNVKYDMGLFNDPYS------HLGPKESDPVDTNA 378 Query: 335 ----HRDLAREAVRKSLVLLKN 388 HR ARE R+S+VLLKN Sbjct: 379 ESRLHRKEAREVARESVVLLKN 400
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 64.3 bits (155), Expect = 1e-10 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 13/142 (9%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEF 178 +L+ D L+++ F+G +SD I + I + +V + +GI+M M Y+++ Sbjct: 268 WLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKY 327 Query: 179 IDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQE-------- 334 + L +K+ + M+ ++DA +L VK+ MGLF PY+ LG +E Sbjct: 328 LPGL---IKSGKVTMAELDDAARHVLNVKYDMGLFNDPYS------HLGPKESDPVDTNA 378 Query: 335 ----HRDLAREAVRKSLVLLKN 388 HR ARE R+SLVLLKN Sbjct: 379 ESRLHRKEAREVARESLVLLKN 400
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 57.0 bits (136), Expect = 2e-08 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 21/163 (12%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDW-----------QGIDRITSPPGVNYSYSVEA-------- 124 FL+TD L+ + F G ++SDW G+ P + VE Sbjct: 341 FLLTDLLRGQYGFDGVILSDWLITNDCKGDCLTGVKPGEKPVPRGMPWGVEKLTPAERFV 400 Query: 125 -GVGAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYAD 301 V AG+D F L V++ + +R++ +V RIL+ KF GLFE PY + Sbjct: 401 KAVNAGVDQ----FGGVTDSALLVQAVQDGKLTEARLDTSVNRILKQKFQTGLFERPYVN 456 Query: 302 PSLVGEL-GKQEHRDLAREAVRKSLVLLKNGKSASTPLLPLPK 427 + ++ G+ + + LA + +SLVLL+N LLPL K Sbjct: 457 ATQANDIVGRADWQQLADDTQARSLVLLQNNN-----LLPLRK 494
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 50.4 bits (119), Expect = 2e-06 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEF 178 +L+T+ LKN+ GFV+SDW + DR+ +G+ AG+D+ M P ++ Sbjct: 212 YLLTEVLKNEWMHDGFVVSDWGAVNDRV-------------SGLDAGLDLEM-PTSHGIT 257 Query: 179 IDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEHRDLAREA 358 + VK+ + + +N AV RIL+V M L + + + H LAR+A Sbjct: 258 DKKIVEAVKSGKLSENILNRAVERILKV-IIMAL-----ENKKENAQYEQDAHHRLARQA 311 Query: 359 VRKSLVLLKNGKSASTPLLPLPK 427 +S+VLLKN +LPL K Sbjct: 312 AAESMVLLKN----EDDVLPLKK 330
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 43.1 bits (100), Expect = 3e-04 Identities = 30/93 (32%), Positives = 43/93 (46%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEFI 181 +L+ LK +L F+GFV++DW + YS AG+DM M P F Sbjct: 280 YLLNYLLKEELGFQGFVMTDWGAL------------YSGIDAANAGLDMDM-PCEAQYFG 326 Query: 182 DDLTYQVKNNIIPMSRINDAVYRILRVKFTMGL 280 +LT V N +P R++D RIL G+ Sbjct: 327 GNLTTAVLNGTLPQDRLDDMATRILSALIYSGV 359
>BGL1_ASPAC (P48825) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 860 Score = 41.2 bits (95), Expect = 0.001 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 31/163 (19%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVG---AGIDMIM---VPF 163 + + LK +L F+GFV+SDW G ++S GVG AG+DM M + F Sbjct: 261 YTLNKLLKAELGFQGFVMSDW----------GAHHS-----GVGSALAGLDMSMPGDITF 305 Query: 164 --AYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMG---LFESPYADPSLVGELG- 325 A + + +LT V N +P R++D RI+ + +G L++ P E G Sbjct: 306 DSATSFWGTNLTIAVLNGTVPQWRVDDMAVRIMAAYYKVGRDRLYQPPNFSSWTRDEYGF 365 Query: 326 -------------------KQEHRDLAREAVRKSLVLLKNGKS 397 ++ H ++ R+ S VLLKN + Sbjct: 366 KYFYPQEGPYEKVNHFVNVQRNHSEVIRKLGADSTVLLKNNNA 408
>BGL1_SACFI (P22506) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 876 Score = 39.3 bits (90), Expect = 0.004 Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 11/132 (8%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAY---- 169 +++ LK +L F+GFV+SDW G S V + + +G+DM M Y Sbjct: 276 YMMNHLLKEELGFQGFVVSDW----------GAQLS-GVYSAI-SGLDMSMPGEVYGGWN 323 Query: 170 --TEFI-DDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFES----PYADPSLVGELGK 328 T F +LT + N +P+ R++D RIL + F + P E G Sbjct: 324 TGTSFWGQNLTKAIYNETVPIERLDDMATRILAALYATNSFPTEDHLPNFSSWTTKEYGN 383 Query: 329 QEHRDLAREAVR 364 + + D E V+ Sbjct: 384 KYYADNTTEIVK 395
>BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 880 Score = 38.1 bits (87), Expect = 0.009 Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 28/167 (16%) Frame = +2 Query: 2 FLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMV---PFAYT 172 +++ LK +L F+GFV+SDW ++ +YS +G+ + ++ + Sbjct: 280 YMINHLLKEELGFQGFVVSDWAA--------QMSGAYSAISGLDMSMPGELLGGWNTGKS 331 Query: 173 EFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSL-------------- 310 + +LT V N +P+ R++D RIL + F + P+ Sbjct: 332 YWGQNLTKAVYNETVPIERLDDMATRILAALYATNSFPTKDRLPNFSSFTTKEYGNEFFV 391 Query: 311 --VGELGKQEH---------RDLAREAVRKSLVLLKNGKSASTPLLP 418 + K H D A + +S+VLLKN K+ + P+ P Sbjct: 392 DKTSPVVKVNHFVDPSNDFTEDTALKVAEESIVLLKNEKN-TLPISP 437
>RIR1_TREPA (O83972) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 845 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 10/55 (18%) Frame = +2 Query: 41 RGFVISDWQGIDRITSPPGVNYSY----------SVEAGVGAGIDMIMVPFAYTE 175 RG+V DWQ + R + G+ Y S+ AG AG+D IM + E Sbjct: 696 RGYVSEDWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTAGVDPIMKQYFLEE 750
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/31 (51%), Positives = 16/31 (51%) Frame = -3 Query: 302 GQHRGSQIDPW*TSP*ESCRQHR*FCSWG*C 210 G H SQI PW TS SCR H C G C Sbjct: 1323 GHHNQSQIQPWSTSS-RSCRPHLFDCQDGEC 1352
>LONH_ARCFU (O29883) Putative protease La homolog type (EC 3.4.21.-)| Length = 621 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Frame = +2 Query: 116 VEAGVGAGIDMIMVPFAYTEFIDDLT----YQVKNNIIPMSRINDAVYRIL 256 +EA + AG+ +++P + IDD+ ++ K +IP+SRIN+ + +L Sbjct: 553 IEAAIQAGLKKVIIP---KDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL 600
>CATA_DESVM (Q9ZN99) Catalase (EC 1.11.1.6)| Length = 479 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -3 Query: 344 DRGVPASRVHQRGLGQHRGSQIDP 273 DRG+PAS H G G H S I P Sbjct: 181 DRGIPASYRHMHGFGSHTFSFISP 204
>RPOC2_PSEAK (Q3ZJ90) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 3462 Score = 29.6 bits (65), Expect = 3.1 Identities = 10/37 (27%), Positives = 23/37 (62%) Frame = +2 Query: 71 IDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEFI 181 +D + + + Y+Y+ +AG+ GID + +P + ++I Sbjct: 79 VDLVENLKSIGYAYATKAGISLGIDDLKIPPSKKDYI 115
>PSTB_METKA (Q8TUR7) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 254 Score = 29.3 bits (64), Expect = 4.0 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +2 Query: 158 PFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEH 337 PF + D++ Y ++ + I D VY L + E DP+ G+Q+ Sbjct: 97 PFPWMSIYDNVAYGLRLMGMDEDEIEDRVYEALEKAALLDQVEDRLDDPASALSGGQQQR 156 Query: 338 RDLARE-AVRKSLVLLKNGKSASTPL 412 +AR A+R ++L+ S P+ Sbjct: 157 LCIARALAMRPEVLLMDEPTSDLDPI 182
>LONH1_THEAC (Q9HJ89) Putative protease La homolog type 1 (EC 3.4.21.-)| Length = 657 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 116 VEAGVGAGIDMIMVP-FAYTEFIDDLTYQVKNNIIPMSRINDAV 244 VEA + AG++ ++VP Y++ I D + K IIP I D + Sbjct: 569 VEAAIEAGLNKVIVPELNYSDIILDADHVNKIEIIPAKTIEDVL 612
>RR3_OENHO (Q9MTI7) Chloroplast 30S ribosomal protein S3| Length = 218 Score = 29.3 bits (64), Expect = 4.0 Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Frame = +2 Query: 11 TDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEF---- 178 +D L+ K R + + Q +I+S GV +E + ID+I V Y F Sbjct: 29 SDGLQEDQKIRDCIQNYIQKNMQISSDSGVEGIARIE--IRKRIDLIQVKI-YMGFPKLL 85 Query: 179 IDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGEL--GKQEHRDLAR 352 I+D T +++ + + ++V R ++ T+ PY DP+++ E G+ +R R Sbjct: 86 IEDGTRRIEELQRIVQKEINSVNR--KINITITKITKPYGDPNILAEFIAGQLNNRVSFR 143 Query: 353 EAVRKSLVL 379 +A++K++ L Sbjct: 144 KAIQKAIEL 152
>RPOC_WIGBR (Q8D232) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 29.3 bits (64), Expect = 4.0 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +2 Query: 104 YSYSVEAGVGAGIDMIMVPFAYTEFIDDLTYQV 202 +SY+ ++G GID I++P ++ I + Y+V Sbjct: 629 FSYAAKSGSSVGIDDILIPLKKSKIIKNAEYEV 661
>VGLD_HHV1H (P06476) Glycoprotein D precursor| Length = 393 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 35 KFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 130 +FRG D +D++T PPGV Y ++AG+ Sbjct: 41 RFRG---KDLPVLDQLTDPPGVRRVYHIQAGL 69
>VGLD_HHV1P (P57083) Glycoprotein D precursor| Length = 394 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 35 KFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 130 +FRG D +D++T PPGV Y ++AG+ Sbjct: 41 RFRG---KDLPVLDQLTDPPGVRRVYHIQAGL 69
>VGLD_HHV11 (Q69091) Glycoprotein D precursor| Length = 394 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 35 KFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 130 +FRG D +D++T PPGV Y ++AG+ Sbjct: 41 RFRG---KDLPVLDQLTDPPGVRRVYHIQAGL 69
>CYAA_SCHPO (P14605) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 1692 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 Query: 353 HEQDRGVPASRVHQRGLGQHRGSQIDPW 270 + D G+PAS H L HR S PW Sbjct: 215 NSDDDGIPASAAHILDLDYHRDSYDSPW 242
>VGLD_HHV1A (P36318) Glycoprotein D precursor| Length = 394 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 35 KFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 130 +FRG D DR+T PPGV Y ++AG+ Sbjct: 41 RFRG---KDLPVPDRLTDPPGVRRVYHIQAGL 69
>PP220_ASFB7 (Q08358) Polyprotein pp220 (220 kDa polyprotein) [Contains: p34; p14;| p37; p150] Length = 2474 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 263 KFTMGLFESPYADPSLVGELGKQEHRDLAREAVRK 367 KF L E + DPSL ELGK +++L R+A+ + Sbjct: 1097 KFRKQLSEM-FEDPSLQQELGKVSYQELIRQAINE 1130
>CATA_CAMJE (Q59296) Catalase (EC 1.11.1.6)| Length = 507 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 347 QDRGVPASRVHQRGLGQHRGSQID 276 +DRG+PAS H G G H S I+ Sbjct: 177 RDRGIPASYRHMHGFGSHTYSFIN 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,410,415 Number of Sequences: 219361 Number of extensions: 1338939 Number of successful extensions: 3263 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3198 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3257 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
