ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chlo... 172 5e-43
2STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chlo... 171 6e-43
3STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chlo... 170 1e-42
4STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chlo... 165 5e-41
5STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chlo... 165 6e-41
6STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chlo... 164 1e-40
7STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chlo... 164 1e-40
8STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chlo... 163 2e-40
9STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chlo... 161 7e-40
10STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chlo... 161 7e-40
11STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chlo... 161 9e-40
12STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chlo... 160 1e-39
13STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chlo... 157 1e-38
14STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, see... 153 2e-37
15STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chlo... 144 1e-34
16STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desatur... 124 1e-28
17STAD_LINUS (P32062) Acyl-[acyl-carrier-protein] desaturase, chlo... 114 1e-25
18TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic li... 32 0.61
19IDI2_ANAVT (Q3MAB0) Isopentenyl-diphosphate delta-isomerase (EC ... 30 2.3
20Y745_PYRAE (Q8ZYJ4) Protein PAE0745 29 5.1
21C4D21_DROME (Q9VLZ7) Probable cytochrome P450 4d21 (EC 1.14.-.-)... 29 5.1
22CRTC_PRUAR (Q9XF98) Calreticulin precursor 29 6.7
23Y304_ARCFU (O29938) Hypothetical protein AF0304 29 6.7
24FBN3_HUMAN (Q75N90) Fibrillin-3 precursor 29 6.7
25GID_AQUAE (O66913) tRNA uridine 5-carboxymethylaminomethyl modif... 29 6.7
26TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-der... 28 8.7
27SPO1_YEAST (P53541) Sporulation-specific protein 1 28 8.7
28AGUA_TRIRE (Q99024) Alpha-glucuronidase precursor (EC 3.2.1.139)... 28 8.7

>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score =  172 bits (435), Expect = 5e-43
 Identities = 76/92 (82%), Positives = 87/92 (94%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHSMPPQK+EIF+SL+ WA +N+L+HLKPVEKCWQPQDFLPDP+S+GFH
Sbjct: 48  FMPPREVHVQVTHSMPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFLPDPSSEGFH 107

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           +EVKELRER+KEIPD Y VCLVGDMITEEALP
Sbjct: 108 EEVKELRERSKEIPDGYYVCLVGDMITEEALP 139



to top

>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
           (Delta(9) stearoyl-acyl carrier protein desaturase)
          Length = 396

 Score =  171 bits (434), Expect = 6e-43
 Identities = 77/92 (83%), Positives = 86/92 (93%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHSMPPQK+EIF+SLD WA +N+L+HLKPVEKCWQPQDFLPDPASDGF 
Sbjct: 51  FMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPASDGFD 110

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++V+ELRERAKEIPDDY V LVGDMITEEALP
Sbjct: 111 EQVRELRERAKEIPDDYFVVLVGDMITEEALP 142



to top

>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 411

 Score =  170 bits (431), Expect = 1e-42
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHSMPPQK+EIFQSL+ WA +N+L HLKPVEKCWQPQDFLPDP+SDGF 
Sbjct: 46  FTPPREVHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDPSSDGFE 105

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++VKELRERAKE+PDDY V LVGDMITEEALP
Sbjct: 106 EQVKELRERAKELPDDYFVVLVGDMITEEALP 137



to top

>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score =  165 bits (418), Expect = 5e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = +3

Query: 192 PPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFHDE 371
           PP+E HVQ THSMPPQK+EIF+SL+GWA +N+L+HLKPVEKCWQPQDFLPDPAS+GF D+
Sbjct: 55  PPREAHVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDPASEGFMDQ 114

Query: 372 VKELRERAKEIPDDYLVCLVGDMITEEALP 461
           VKELRER KEIPD+YLV LVGDMITEEALP
Sbjct: 115 VKELRERTKEIPDEYLVVLVGDMITEEALP 144



to top

>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score =  165 bits (417), Expect = 6e-41
 Identities = 74/92 (80%), Positives = 84/92 (91%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHSMPPQK+EIF+S++GWA  N+L+HLKPVEKCWQ QDFLPDPAS+GF 
Sbjct: 51  FQPPREVHVQVTHSMPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFLPDPASEGFD 110

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++VKELR RAKEIPDDY V LVGDMITEEALP
Sbjct: 111 EQVKELRARAKEIPDDYFVVLVGDMITEEALP 142



to top

>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score =  164 bits (414), Expect = 1e-40
 Identities = 72/92 (78%), Positives = 85/92 (92%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVH+QVTHSMPPQKMEIF+SL+ WA +NLL+HLKPVE+CWQPQDFLPD A +GFH
Sbjct: 51  FMPPREVHLQVTHSMPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFLPDSAFEGFH 110

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++V+ELRERAKE+PD+Y V LVGDMITEEALP
Sbjct: 111 EQVRELRERAKELPDEYFVVLVGDMITEEALP 142



to top

>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 397

 Score =  164 bits (414), Expect = 1e-40
 Identities = 74/91 (81%), Positives = 82/91 (90%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PPKEV VQ+THSMPP K+EIF+SL+GWA +N+L HLKPVEKCWQP DFLPDP SDGFH
Sbjct: 51  FTPPKEVPVQITHSMPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFLPDPNSDGFH 110

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEAL 458
           ++VKELRERAKEIPDDY V LVGDMITEEAL
Sbjct: 111 EQVKELRERAKEIPDDYFVVLVGDMITEEAL 141



to top

>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score =  163 bits (413), Expect = 2e-40
 Identities = 74/92 (80%), Positives = 82/92 (89%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F+PP+EVHVQVTHSMPP+K EIF SL GWA +N+L+HLKPVEKCWQ  DFLPDPAS+GF 
Sbjct: 48  FSPPREVHVQVTHSMPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFLPDPASEGFE 107

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           D+VKELRER KEIPDDY V LVGDMITEEALP
Sbjct: 108 DQVKELRERCKEIPDDYFVVLVGDMITEEALP 139



to top

>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 399

 Score =  161 bits (408), Expect = 7e-40
 Identities = 72/92 (78%), Positives = 85/92 (92%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F+PP+EVHVQVTHSMP +K+EIF+SL+GWA +NLL+HLKPVEKCWQPQD+LPDPAS+ F 
Sbjct: 54  FSPPREVHVQVTHSMPQEKIEIFKSLEGWAEENLLVHLKPVEKCWQPQDYLPDPASEDFR 113

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           D+VKE++ERAKEIPDD  V LVGDMITEEALP
Sbjct: 114 DQVKEIQERAKEIPDDLYVVLVGDMITEEALP 145



to top

>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score =  161 bits (408), Expect = 7e-40
 Identities = 72/92 (78%), Positives = 81/92 (88%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHSMPP+K+E+F SL  WA  NLL+HLKPVEKCWQP DFLPDPAS+GF 
Sbjct: 48  FTPPREVHVQVTHSMPPEKIEVFDSLRDWAAQNLLVHLKPVEKCWQPTDFLPDPASEGFD 107

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++VKELRER KEIPDDY V L+GDMITEEALP
Sbjct: 108 EQVKELRERCKEIPDDYFVVLIGDMITEEALP 139



to top

>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score =  161 bits (407), Expect = 9e-40
 Identities = 73/92 (79%), Positives = 82/92 (89%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           + PP+EVH+QV HS+PPQK EIF SL  WA++NLL  LKPVEK WQPQDFLPDP+SDGF+
Sbjct: 45  YTPPREVHLQVKHSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDGFY 104

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           DEVKELRERAKEIPDDY VCLVGDM+TEEALP
Sbjct: 105 DEVKELRERAKEIPDDYFVCLVGDMVTEEALP 136



to top

>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score =  160 bits (406), Expect = 1e-39
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVH QV HSMPPQK+EIF+S++GWA +N+L+HLKPVEKCWQ QDFLPDPASDGF 
Sbjct: 51  FTPPREVHQQVLHSMPPQKIEIFKSMEGWAENNILVHLKPVEKCWQAQDFLPDPASDGFM 110

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++V+ELR RAKEIPDDY V LVGDMITEEALP
Sbjct: 111 EQVEELRARAKEIPDDYFVVLVGDMITEEALP 142



to top

>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score =  157 bits (397), Expect = 1e-38
 Identities = 72/92 (78%), Positives = 80/92 (86%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PPKEVHVQV HSMPPQK+EIF+S++ WA  NLL  LK VEK WQPQDFLPDPASDGF 
Sbjct: 53  FTPPKEVHVQVLHSMPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFLPDPASDGFE 112

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           D+V+ELRERA+E+PDDY V LVGDMITEEALP
Sbjct: 113 DQVRELRERARELPDDYFVVLVGDMITEEALP 144



to top

>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 399

 Score =  153 bits (386), Expect = 2e-37
 Identities = 71/92 (77%), Positives = 80/92 (86%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVH+QV HSMPPQK+EIF+S++  A  NLL HLK VEK WQPQDFLPDPASDGF 
Sbjct: 54  FTPPREVHLQVLHSMPPQKIEIFKSMEDRAEQNLLPHLKDVEKSWQPQDFLPDPASDGFE 113

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           D+VKELRERA+E+PDDY V LVGDMITEEALP
Sbjct: 114 DQVKELRERARELPDDYFVVLVGDMITEEALP 145



to top

>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score =  144 bits (363), Expect = 1e-34
 Identities = 64/92 (69%), Positives = 78/92 (84%)
 Frame = +3

Query: 186 FAPPKEVHVQVTHSMPPQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFH 365
           F PP+EVHVQVTHS+ P+K EIF SL+ WA++N+L+ LK V+KCWQP DFLPD AS+GF 
Sbjct: 45  FTPPREVHVQVTHSLAPEKREIFNSLNNWAQENILVLLKDVDKCWQPSDFLPDSASEGFD 104

Query: 366 DEVKELRERAKEIPDDYLVCLVGDMITEEALP 461
           ++V ELR+R KEIPDDY + LVGDMITEEALP
Sbjct: 105 EQVMELRKRCKEIPDDYFIVLVGDMITEEALP 136



to top

>STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desaturase,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 385

 Score =  124 bits (311), Expect = 1e-28
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = +3

Query: 234 PQKMEIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFHDEVKELRERAKEIPDD 413
           P+  E+F SL+GWARDN+L+HLK VE  WQPQD+LPDP SD F D+VKE+RERAK+IPD+
Sbjct: 55  PEVDELFNSLEGWARDNILVHLKSVENSWQPQDYLPDPTSDAFEDQVKEMRERAKDIPDE 114

Query: 414 YLVCLVGDMITEEALP 461
           Y V LVGDMITEEALP
Sbjct: 115 YFVVLVGDMITEEALP 130



to top

>STAD_LINUS (P32062) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score =  114 bits (285), Expect = 1e-25
 Identities = 56/78 (71%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +3

Query: 231 PPQKMEIFQSLDGWA-RDNLLLHLKPVEKCWQPQDFLPDPASDGFHDEVKELRERAKEIP 407
           P    EIF+SL     RD L+ HLKPVEKCWQPQDFLP+P SDGF ++VKELR RAKE+P
Sbjct: 65  PTGSWEIFKSLGRLGLRDVLISHLKPVEKCWQPQDFLPEPESDGFEEQVKELRARAKELP 124

Query: 408 DDYLVCLVGDMITEEALP 461
           DDY V LVGDMITEEALP
Sbjct: 125 DDYFVVLVGDMITEEALP 142



to top

>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch|
           protein 5)
          Length = 493

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 229 CHLRRWKYSSLLMVGLEIICCCILSQLRSVGSHRISSLIQHLMDFTMKLRNSENVPRK 402
           C L R + S   +   E++CC   +  R  G HR+  +     DF  K RN E+  R+
Sbjct: 101 CRLHRGQLSLFCLEDKELLCCSCQADPRHQG-HRVQPVKDTAHDFRAKCRNMEHALRE 157



to top

>IDI2_ANAVT (Q3MAB0) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 350

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 246 EIFQSLDGWARDNLLLHLKPVEKCWQPQDFLPDPASDGFHDEVKELRE 389
           E  + +D    D L+LH+ P+++C QP+    D    G  D++ EL E
Sbjct: 146 ECLRIIDMLEADALILHINPLQECIQPKG---DVNFQGLLDKISELCE 190



to top

>Y745_PYRAE (Q8ZYJ4) Protein PAE0745|
          Length = 213

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 285 LLLHLKPVEKCWQPQDFL 338
           LLL   PVE+CW P++FL
Sbjct: 144 LLLPQVPVEECWSPEEFL 161



to top

>C4D21_DROME (Q9VLZ7) Probable cytochrome P450 4d21 (EC 1.14.-.-) (CYPIVD21)|
          Length = 511

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -2

Query: 437 VSNQTNKIIIR--NFLGTFSEFLNFIVKSIRCWIREEILWLPTLLNWLKMQQQIISSPTI 264
           V N    + +R  NF+  F ++ N   K+ R WI  E L        LK  + I+SS T+
Sbjct: 42  VGNGLQALTLRPENFIQRFGDYFNKYGKTFRLWILGECL---IYTKDLKYFESILSSSTL 98

Query: 263 KRLEYFHLLRWHR 225
             L+  HL R+ R
Sbjct: 99  --LKKAHLYRFLR 109



to top

>CRTC_PRUAR (Q9XF98) Calreticulin precursor|
          Length = 421

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = +3

Query: 318 WQPQDFLPDPAS---DGFHDEVKELRERAKEIPDDY 416
           W+ Q+++PDP     +G+ D  KE+ +   + P+D+
Sbjct: 224 WEDQEYIPDPEDKKPEGYDDIPKEITDPDAKKPEDW 259



to top

>Y304_ARCFU (O29938) Hypothetical protein AF0304|
          Length = 359

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 389 FSEFLNFIVKSIRCWIREEILWLPTLLNWLKMQQQIISSPTIKRLEYFHL 240
           F +FLN  V  I C++R + LWL +        +Q + SP  +  E F +
Sbjct: 19  FRKFLNIRVSKIVCYLRRQDLWLES------GYKQAVKSPFNRSTEKFKI 62



to top

>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor|
          Length = 2809

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 325 GCQHFSTGLRCSNRLSLAQPSRDWNI 248
           GCQH  TGL C+  L  A   R W +
Sbjct: 195 GCQHQLTGLVCTKALCCATVGRAWGL 220



to top

>GID_AQUAE (O66913) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 445

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 363 HDEVKELRERAKEIPDDYLVCLVGDMITEEAL 458
           H  +  +RE  KEIP+D +V +    +T +AL
Sbjct: 112 HPNITLIREEVKEIPEDEVVVIATGPLTSDAL 143



to top

>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived|
           apoptosis-inducing RBCC protein) (MAIR protein) (Nc8
           protein) (Hemopoeitic lineage switch protein 5)
          Length = 501

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +1

Query: 229 CHLRRWKYSSLLMVGLEIICCCILSQLRSVGSHRISSLIQHLMDFTMKLRNSENVPRK 402
           C   R   +   +   E++CC   +  R    HR+  +     DF  K +N E+V R+
Sbjct: 101 CRAHRAPLTLFCLEDKELLCCACQADARHQ-EHRVQPIKDTAQDFRAKCKNMEHVLRE 157



to top

>SPO1_YEAST (P53541) Sporulation-specific protein 1|
          Length = 536

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 8/25 (32%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 ASDGFHDEVKELRERAKEIPDDYLV 422
           +S  F+++++E+    +EIP+DY++
Sbjct: 96  SSSNFYEQIEEIMNSIEEIPEDYMI 120



to top

>AGUA_TRIRE (Q99024) Alpha-glucuronidase precursor (EC 3.2.1.139)|
           (Alpha-glucosiduronase) (GLRI)
          Length = 847

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 MEIFQSLDGWARDNLLLHLKPVEKCWQPQDF-LPDPASDGFHDEVKELRERAKEIPDDYL 419
           ++ F+SLDG   DN+L+ +K     + P DF + +PAS  F +  K       E+  +YL
Sbjct: 366 VDFFKSLDGQFDDNVLVQIK-----YGPIDFQVREPASPLFANLPKTAVSIELEVTQEYL 420


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,634,452
Number of Sequences: 219361
Number of extensions: 966393
Number of successful extensions: 3388
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3387
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top